RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 DPP8Q6V1X1 898 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-227ENST00000556897 LRP10Q7Z4F1 713 aa11.92□□□□□ -0.5
HNRNPC-227ENST00000556897 SUPT20HQ8NEM7 779 aa11.92□□□□□ -0.5
HNRNPC-227ENST00000556897 RTFDC1Q9BY42 306 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-227ENST00000556897 ZNF408Q9H9D4 720 aa11.92□□□□□ -0.5
HNRNPC-227ENST00000556897 CA12O43570 354 aa11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 BBOX1O75936 387 aa11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 RAD17O75943 681 aa11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 ANXA1P04083 346 aa11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 EIF2S2P20042 333 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 HIRAP54198 1017 aaPredicted RBP11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 KIAA2012Q0VF49 1180 aa11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 CIAPIN1Q6FI81 312 aa11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 SP8Q8IXZ3 490 aa11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 MPNDQ8N594 471 aa11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 BCL2L13Q9BXK5 485 aa11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 PGAP2Q9UHJ9 254 aa11.91□□□□□ -0.5
HNRNPC-227ENST00000556897 CASP8AP2Q9UKL3 1982 aa11.9□□□□□ -0.5
HNRNPC-227ENST00000556897 SHTN1A0MZ66 631 aa11.9□□□□□ -0.5
HNRNPC-227ENST00000556897 HCLS1P14317 486 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-227ENST00000556897 RGS19P49795 217 aa11.9□□□□□ -0.5
HNRNPC-227ENST00000556897 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-227ENST00000556897 TRPM4Q8TD43 1214 aa11.9□□□□□ -0.5
HNRNPC-227ENST00000556897 ZC3H15Q8WU90 426 aaKnown RBP11.9□□□□□ -0.5
HNRNPC-227ENST00000556897 HHIPL1Q96JK4 782 aa11.9□□□□□ -0.5
HNRNPC-227ENST00000556897 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
HNRNPC-227ENST00000556897 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
HNRNPC-227ENST00000556897 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
HNRNPC-227ENST00000556897 MAPK8IP3Q9UPT6 1336 aa11.89□□□□□ -0.51
HNRNPC-227ENST00000556897 YDJCA8MPS7 323 aa11.89□□□□□ -0.51
HNRNPC-227ENST00000556897 TNIP1Q15025 636 aa11.89□□□□□ -0.51
HNRNPC-227ENST00000556897 CDC37L1Q7L3B6 337 aa11.89□□□□□ -0.51
HNRNPC-227ENST00000556897 NLRP10Q86W26 655 aa11.89□□□□□ -0.51
HNRNPC-227ENST00000556897 MCOLN1Q9GZU1 580 aa11.89□□□□□ -0.51
HNRNPC-227ENST00000556897 CNOT7Q9UIV1 285 aaKnown RBP11.89□□□□□ -0.51
HNRNPC-227ENST00000556897 AIMP1Q12904 312 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-227ENST00000556897 DLK2Q6UY11 383 aa11.88□□□□□ -0.51
HNRNPC-227ENST00000556897 DDX46Q7L014 1031 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-227ENST00000556897 COPS6Q7L5N1 327 aa11.88□□□□□ -0.51
HNRNPC-227ENST00000556897 MICALL2Q8IY33 904 aa11.88□□□□□ -0.51
HNRNPC-227ENST00000556897 ZNF428Q96B54 188 aa11.88□□□□□ -0.51
HNRNPC-227ENST00000556897 ZIC5Q96T25 663 aa11.88□□□□□ -0.51
HNRNPC-227ENST00000556897 TRMT112Q9UI30 125 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-227ENST00000556897 LAMB2P55268 1798 aa11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 H7C1D1 291 aa11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 NOGQ13253 232 aa11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 DGKZQ13574 1117 aa11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 GRAPQ13588 217 aa11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 HSP90AB3PQ58FF7 597 aa11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 USP48Q86UV5 1035 aa11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 GRAPLQ8TC17 118 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 XAGE3Q8WTP9 111 aa11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-227ENST00000556897 SH3TC1Q8TE82 1336 aa11.86□□□□□ -0.51
HNRNPC-227ENST00000556897 HUNKP57058 714 aa11.86□□□□□ -0.51
HNRNPC-227ENST00000556897 TCIRG1Q13488 830 aa11.86□□□□□ -0.51
HNRNPC-227ENST00000556897 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
HNRNPC-227ENST00000556897 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-227ENST00000556897 DUOX1Q9NRD9 1551 aa11.86□□□□□ -0.51
HNRNPC-227ENST00000556897 ANKRD36CQ5JPF3 1778 aa11.86□□□□□ -0.51
HNRNPC-227ENST00000556897 TAF1P21675 1872 aa11.86□□□□□ -0.51
HNRNPC-227ENST00000556897 PDE4DIPQ5VU43 2346 aa11.86□□□□□ -0.51
HNRNPC-227ENST00000556897 EGFRP00533 1210 aa11.85□□□□□ -0.51
HNRNPC-227ENST00000556897 RIPK4P57078 832 aa11.85□□□□□ -0.51
HNRNPC-227ENST00000556897 TBC1D10BQ4KMP7 808 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-227ENST00000556897 DBNDD1Q9H9R9 158 aa11.85□□□□□ -0.51
HNRNPC-227ENST00000556897 NSFL1CQ9UNZ2 370 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-227ENST00000556897 PSMD14O00487 310 aa11.84□□□□□ -0.51
HNRNPC-227ENST00000556897 WASHC4Q2M389 1173 aa11.84□□□□□ -0.51
HNRNPC-227ENST00000556897 KRT26Q7Z3Y9 468 aa11.84□□□□□ -0.51
HNRNPC-227ENST00000556897 TMC4Q7Z404 712 aa11.84□□□□□ -0.51
HNRNPC-227ENST00000556897 DPF2Q92785 391 aa11.84□□□□□ -0.51
HNRNPC-227ENST00000556897 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-227ENST00000556897 FAM155AB1AL88 458 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 ADM5C9JUS6 153 aa11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 RIMBP2O15034 1052 aa11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 KRT24Q2M2I5 525 aa11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 RGMBQ6NW40 437 aa11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 GBA2Q9HCG7 927 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 KCNQ5Q9NR82 932 aa11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 BABAM1Q9NWV8 329 aa11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 POLLQ9UGP5 575 aa11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
HNRNPC-227ENST00000556897 POLR2AP24928 1970 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-227ENST00000556897 C6orf229H3BNL8 230 aa11.82□□□□□ -0.52
HNRNPC-227ENST00000556897 GPSM2P81274 684 aa11.82□□□□□ -0.52
HNRNPC-227ENST00000556897 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
HNRNPC-227ENST00000556897 DCPSQ96C86 337 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-227ENST00000556897 FAM89AQ96GI7 184 aa11.82□□□□□ -0.52
HNRNPC-227ENST00000556897 CHPF2Q9P2E5 772 aa11.82□□□□□ -0.52
HNRNPC-227ENST00000556897 RTL9Q8NET4 1388 aa11.81□□□□□ -0.52
HNRNPC-227ENST00000556897 ATP5J2-PTCD1G3V325 749 aa11.81□□□□□ -0.52
HNRNPC-227ENST00000556897 ECE2O60344 883 aa11.81□□□□□ -0.52
HNRNPC-227ENST00000556897 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
HNRNPC-227ENST00000556897 ZNF157P51786 506 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-227ENST00000556897 KIF23Q02241 960 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-227ENST00000556897 LMOD3Q0VAK6 560 aa11.81□□□□□ -0.52
HNRNPC-227ENST00000556897 SF3B3Q15393 1217 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms