RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 PLIN1O60240 522 aa22.01■■□□□ 1.11
PSEN1-218ENST00000556864 NBPF7P0C2Y1 421 aaPredicted RBP22.01■■□□□ 1.11
PSEN1-218ENST00000556864 KCNA3P22001 575 aa22.01■■□□□ 1.11
PSEN1-218ENST00000556864 ALDH1B1P30837 517 aa22.01■■□□□ 1.11
PSEN1-218ENST00000556864 CRAMP1Q96RY5 1269 aa22.01■■□□□ 1.11
PSEN1-218ENST00000556864 USP44Q9H0E7 712 aa22.01■■□□□ 1.11
PSEN1-218ENST00000556864 RLBP1P12271 317 aa22■■□□□ 1.11
PSEN1-218ENST00000556864 PANK1Q8TE04 598 aa22■■□□□ 1.11
PSEN1-218ENST00000556864 PRPF40BQ6NWY9 871 aaKnown RBP21.99■■□□□ 1.11
PSEN1-218ENST00000556864 PELP1Q8IZL8 1130 aaKnown RBP21.99■■□□□ 1.11
PSEN1-218ENST00000556864 SUCLG2Q96I99 432 aa21.99■■□□□ 1.11
PSEN1-218ENST00000556864 MEIS3Q99687 375 aa21.99■■□□□ 1.11
PSEN1-218ENST00000556864 CHMP4BQ9H444 224 aaKnown RBP21.99■■□□□ 1.11
PSEN1-218ENST00000556864 BCS1LQ9Y276 419 aa21.99■■□□□ 1.11
PSEN1-218ENST00000556864 GRAPQ13588 217 aa21.98■■□□□ 1.11
PSEN1-218ENST00000556864 MVPQ14764 893 aaKnown RBP21.98■■□□□ 1.11
PSEN1-218ENST00000556864 GRAPLQ8TC17 118 aaPredicted RBP21.98■■□□□ 1.11
PSEN1-218ENST00000556864 DDX19BQ9UMR2 479 aa21.98■■□□□ 1.11
PSEN1-218ENST00000556864 ARFGEF1Q9Y6D6 1849 aa21.97■■□□□ 1.11
PSEN1-218ENST00000556864 SOGA3Q5TF21 947 aa21.97■■□□□ 1.11
PSEN1-218ENST00000556864 TMC4Q7Z404 712 aa21.97■■□□□ 1.11
PSEN1-218ENST00000556864 TTLL11Q8NHH1 800 aa21.97■■□□□ 1.11
PSEN1-218ENST00000556864 WWC3Q9ULE0 1092 aa21.97■■□□□ 1.11
PSEN1-218ENST00000556864 CACNA1SQ13698 1873 aa21.96■■□□□ 1.11
PSEN1-218ENST00000556864 PPEF1O14829 653 aaPredicted RBP21.96■■□□□ 1.11
PSEN1-218ENST00000556864 GPR162Q16538 588 aa21.96■■□□□ 1.11
PSEN1-218ENST00000556864 CDC5LQ99459 802 aaKnown RBP21.96■■□□□ 1.11
PSEN1-218ENST00000556864 CHMP3Q9Y3E7 222 aa21.96■■□□□ 1.11
PSEN1-218ENST00000556864 CSF1RP07333 972 aa21.95■■□□□ 1.1
PSEN1-218ENST00000556864 FOXO4P98177 505 aa21.95■■□□□ 1.1
PSEN1-218ENST00000556864 FAM161AQ3B820 660 aa21.95■■□□□ 1.1
PSEN1-218ENST00000556864 LMBR1LQ6UX01 489 aa21.95■■□□□ 1.1
PSEN1-218ENST00000556864 CCDC85AQ96PX6 553 aaPredicted RBP21.95■■□□□ 1.1
PSEN1-218ENST00000556864 TMX4Q9H1E5 349 aaPredicted RBP21.95■■□□□ 1.1
PSEN1-218ENST00000556864 GNAI2P04899 355 aa21.94■■□□□ 1.1
PSEN1-218ENST00000556864 CENPBP07199 599 aaPredicted RBP21.94■■□□□ 1.1
PSEN1-218ENST00000556864 RABL6Q3YEC7 729 aaPredicted RBP21.94■■□□□ 1.1
PSEN1-218ENST00000556864 BICC1Q9H694 974 aaKnown RBP21.94■■□□□ 1.1
PSEN1-218ENST00000556864 GREM2Q9H772 168 aa21.94■■□□□ 1.1
PSEN1-218ENST00000556864 COG6Q9Y2V7 657 aa21.94■■□□□ 1.1
PSEN1-218ENST00000556864 LRRFIP2Q9Y608 721 aaKnown RBP21.94■■□□□ 1.1
PSEN1-218ENST00000556864 ANKRD18BA2A2Z9 1011 aa21.93■■□□□ 1.1
PSEN1-218ENST00000556864 LRRC37AA6NMS7 1700 aa21.93■■□□□ 1.1
PSEN1-218ENST00000556864 GRIN3BO60391 1043 aa21.93■■□□□ 1.1
PSEN1-218ENST00000556864 BBOX1O75936 387 aa21.93■■□□□ 1.1
PSEN1-218ENST00000556864 IFIT5Q13325 482 aaKnown RBP21.93■■□□□ 1.1
PSEN1-218ENST00000556864 EPHA10Q5JZY3 1008 aa21.93■■□□□ 1.1
PSEN1-218ENST00000556864 ANKRD18AQ8IVF6 992 aa21.93■■□□□ 1.1
PSEN1-218ENST00000556864 SRCAPQ6ZRS2 3230 aa21.93■■□□□ 1.1
PSEN1-218ENST00000556864 ITGA6P23229 1130 aa21.92■■□□□ 1.1
PSEN1-218ENST00000556864 CCDC57Q2TAC2 916 aa21.92■■□□□ 1.1
PSEN1-218ENST00000556864 C20orf194Q5TEA3 1177 aa21.92■■□□□ 1.1
PSEN1-218ENST00000556864 CC2D2BQ6DHV5 1058 aa21.92■■□□□ 1.1
PSEN1-218ENST00000556864 ANKRD44Q8N8A2 993 aa21.92■■□□□ 1.1
PSEN1-218ENST00000556864 KAZALD1Q96I82 304 aa21.92■■□□□ 1.1
PSEN1-218ENST00000556864 YBX3P16989 372 aaKnown RBP eCLIP21.91■■□□□ 1.1
PSEN1-218ENST00000556864 IGHMBP2P38935 993 aaKnown RBP21.91■■□□□ 1.1
PSEN1-218ENST00000556864 CCDC93Q567U6 631 aa21.91■■□□□ 1.1
PSEN1-218ENST00000556864 TAF7LQ5H9L4 462 aa21.91■■□□□ 1.1
PSEN1-218ENST00000556864 SEC31BQ9NQW1 1179 aa21.91■■□□□ 1.1
PSEN1-218ENST00000556864 SLX4Q8IY92 1834 aa21.91■■□□□ 1.1
PSEN1-218ENST00000556864 ZBTB7BO15156 539 aaPredicted RBP21.9■■□□□ 1.1
PSEN1-218ENST00000556864 C21orf2O43822 256 aa21.9■■□□□ 1.1
PSEN1-218ENST00000556864 GRIPAP1Q4V328 841 aa21.9■■□□□ 1.1
PSEN1-218ENST00000556864 CELF1Q92879 486 aaKnown RBP21.9■■□□□ 1.1
PSEN1-218ENST00000556864 RPS8P62241 208 aaKnown RBP21.89■■□□□ 1.09
PSEN1-218ENST00000556864 ATP6V0A2Q9Y487 856 aa21.89■■□□□ 1.09
PSEN1-218ENST00000556864 SUPT16HQ9Y5B9 1047 aaKnown RBP21.89■■□□□ 1.09
PSEN1-218ENST00000556864 ZNF219Q9P2Y4 722 aaPredicted RBP21.88■■□□□ 1.09
PSEN1-218ENST00000556864 COL4A1P02462 1669 aa21.88■■□□□ 1.09
PSEN1-218ENST00000556864 SP8Q8IXZ3 490 aa21.87■■□□□ 1.09
PSEN1-218ENST00000556864 RTKN2Q8IZC4 609 aa21.87■■□□□ 1.09
PSEN1-218ENST00000556864 MPHOSPH8Q99549 860 aa21.87■■□□□ 1.09
PSEN1-218ENST00000556864 SPEF2Q9C093 1822 aa21.87■■□□□ 1.09
PSEN1-218ENST00000556864 MTX1Q13505 466 aa21.86■■□□□ 1.09
PSEN1-218ENST00000556864 C7orf43Q8WVR3 580 aa21.86■■□□□ 1.09
PSEN1-218ENST00000556864 BSDC1Q9NW68 430 aaPredicted RBP21.85■■□□□ 1.09
PSEN1-218ENST00000556864 SNED1Q8TER0 1413 aa21.84■■□□□ 1.09
PSEN1-218ENST00000556864 ARHGAP27Q6ZUM4 889 aa21.84■■□□□ 1.09
PSEN1-218ENST00000556864 TAOK3Q9H2K8 898 aa21.84■■□□□ 1.09
PSEN1-218ENST00000556864 C1orf115Q9H7X2 142 aa21.84■■□□□ 1.09
PSEN1-218ENST00000556864 ZBTB40Q9NUA8 1239 aa21.84■■□□□ 1.09
PSEN1-218ENST00000556864 LTBP3Q9NS15 1303 aa21.83■■□□□ 1.09
PSEN1-218ENST00000556864 SRGAP3O43295 1099 aa21.83■■□□□ 1.09
PSEN1-218ENST00000556864 TAF1P21675 1872 aa21.83■■□□□ 1.08
PSEN1-218ENST00000556864 FKBP4Q02790 459 aaKnown RBP eCLIP21.82■■□□□ 1.08
PSEN1-218ENST00000556864 DPP8Q6V1X1 898 aaPredicted RBP21.82■■□□□ 1.08
PSEN1-218ENST00000556864 SUPT20HQ8NEM7 779 aa21.82■■□□□ 1.08
PSEN1-218ENST00000556864 CRBNQ96SW2 442 aa21.82■■□□□ 1.08
PSEN1-218ENST00000556864 CNNM1Q9NRU3 951 aa21.82■■□□□ 1.08
PSEN1-218ENST00000556864 FER1L6Q2WGJ9 1857 aa21.81■■□□□ 1.08
PSEN1-218ENST00000556864 LDHAL6AQ6ZMR3 332 aa21.81■■□□□ 1.08
PSEN1-218ENST00000556864 MPNDQ8N594 471 aa21.81■■□□□ 1.08
PSEN1-218ENST00000556864 PSMD1Q99460 953 aa21.81■■□□□ 1.08
PSEN1-218ENST00000556864 ANKRD2Q9GZV1 360 aa21.81■■□□□ 1.08
PSEN1-218ENST00000556864 XDHP47989 1333 aa21.8■■□□□ 1.08
PSEN1-218ENST00000556864 LTBP1Q14766 1721 aa21.8■■□□□ 1.08
PSEN1-218ENST00000556864 DUOX1Q9NRD9 1551 aa21.8■■□□□ 1.08
PSEN1-218ENST00000556864 NFKBIEO00221 500 aa21.8■■□□□ 1.08
PSEN1-218ENST00000556864 RFX5P48382 616 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms