RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 PRELPP51888 382 aa21.64■■□□□ 1.05
PSEN1-217ENST00000556533 ZNF784Q8NCA9 323 aaPredicted RBP21.64■■□□□ 1.05
PSEN1-217ENST00000556533 SEC31BQ9NQW1 1179 aa21.64■■□□□ 1.05
PSEN1-217ENST00000556533 ATP6V0A2Q9Y487 856 aa21.64■■□□□ 1.05
PSEN1-217ENST00000556533 ARFGEF1Q9Y6D6 1849 aa21.64■■□□□ 1.05
PSEN1-217ENST00000556533 BCAR3O75815 825 aa21.63■■□□□ 1.05
PSEN1-217ENST00000556533 CTSWP56202 376 aa21.63■■□□□ 1.05
PSEN1-217ENST00000556533 CC2D2BQ6DHV5 1058 aa21.63■■□□□ 1.05
PSEN1-217ENST00000556533 CELF1Q92879 486 aaKnown RBP21.63■■□□□ 1.05
PSEN1-217ENST00000556533 CASP7P55210 303 aa21.62■■□□□ 1.05
PSEN1-217ENST00000556533 FKBP4Q02790 459 aaKnown RBP eCLIP21.62■■□□□ 1.05
PSEN1-217ENST00000556533 FRAT1Q92837 279 aaPredicted RBP21.62■■□□□ 1.05
PSEN1-217ENST00000556533 ZNF277Q9NRM2 450 aaPredicted RBP21.62■■□□□ 1.05
PSEN1-217ENST00000556533 GRM8O00222 908 aa21.61■■□□□ 1.05
PSEN1-217ENST00000556533 RPS8P62241 208 aaKnown RBP21.61■■□□□ 1.05
PSEN1-217ENST00000556533 SP8Q8IXZ3 490 aa21.61■■□□□ 1.05
PSEN1-217ENST00000556533 TTLL11Q8NHH1 800 aa21.61■■□□□ 1.05
PSEN1-217ENST00000556533 API5Q9BZZ5 524 aaKnown RBP21.61■■□□□ 1.05
PSEN1-217ENST00000556533 YTHDC1Q96MU7 727 aaKnown RBP21.6■■□□□ 1.05
PSEN1-217ENST00000556533 GREM2Q9H772 168 aa21.6■■□□□ 1.05
PSEN1-217ENST00000556533 LTBP3Q9NS15 1303 aa21.59■■□□□ 1.05
PSEN1-217ENST00000556533 CHD4Q14839 1912 aa21.59■■□□□ 1.05
PSEN1-217ENST00000556533 BRPF1P55201 1214 aaPredicted RBP21.59■■□□□ 1.05
PSEN1-217ENST00000556533 CACNA1FO60840 1977 aa21.59■■□□□ 1.05
PSEN1-217ENST00000556533 KIF16BQ96L93 1317 aa21.58■■□□□ 1.05
PSEN1-217ENST00000556533 DDX60Q8IY21 1712 aaKnown RBP21.58■■□□□ 1.05
PSEN1-217ENST00000556533 IPO8O15397 1037 aaKnown RBP21.58■■□□□ 1.05
PSEN1-217ENST00000556533 GRIPAP1Q4V328 841 aa21.58■■□□□ 1.05
PSEN1-217ENST00000556533 DPP8Q6V1X1 898 aaPredicted RBP21.58■■□□□ 1.05
PSEN1-217ENST00000556533 TMC4Q7Z404 712 aa21.58■■□□□ 1.05
PSEN1-217ENST00000556533 CHMP3Q9Y3E7 222 aa21.58■■□□□ 1.05
PSEN1-217ENST00000556533 CACNA1SQ13698 1873 aa21.58■■□□□ 1.04
PSEN1-217ENST00000556533 ANKRD18AQ8IVF6 992 aa21.57■■□□□ 1.04
PSEN1-217ENST00000556533 MPNDQ8N594 471 aa21.57■■□□□ 1.04
PSEN1-217ENST00000556533 PSMD1Q99460 953 aa21.57■■□□□ 1.04
PSEN1-217ENST00000556533 PLA2G12BQ9BX93 195 aa21.57■■□□□ 1.04
PSEN1-217ENST00000556533 NBPF7P0C2Y1 421 aaPredicted RBP21.56■■□□□ 1.04
PSEN1-217ENST00000556533 CCT4P50991 539 aaKnown RBP21.56■■□□□ 1.04
PSEN1-217ENST00000556533 CDC5LQ99459 802 aaKnown RBP21.56■■□□□ 1.04
PSEN1-217ENST00000556533 GPBP1L1Q9HC44 474 aaPredicted RBP21.56■■□□□ 1.04
PSEN1-217ENST00000556533 NSFL1CQ9UNZ2 370 aaKnown RBP21.56■■□□□ 1.04
PSEN1-217ENST00000556533 LAMB2P55268 1798 aa21.56■■□□□ 1.04
PSEN1-217ENST00000556533 IARSP41252 1262 aaKnown RBP21.55■■□□□ 1.04
PSEN1-217ENST00000556533 FOXO4P98177 505 aa21.55■■□□□ 1.04
PSEN1-217ENST00000556533 FAM161AQ3B820 660 aa21.55■■□□□ 1.04
PSEN1-217ENST00000556533 EPHA10Q5JZY3 1008 aa21.55■■□□□ 1.04
PSEN1-217ENST00000556533 ARHGAP45Q92619 1136 aa21.55■■□□□ 1.04
PSEN1-217ENST00000556533 CSF1RP07333 972 aa21.54■■□□□ 1.04
PSEN1-217ENST00000556533 ITGA6P23229 1130 aa21.54■■□□□ 1.04
PSEN1-217ENST00000556533 LMBR1LQ6UX01 489 aa21.54■■□□□ 1.04
PSEN1-217ENST00000556533 SUCLG2Q96I99 432 aa21.54■■□□□ 1.04
PSEN1-217ENST00000556533 GPSM2P81274 684 aa21.53■■□□□ 1.04
PSEN1-217ENST00000556533 SUPT20HQ8NEM7 779 aa21.53■■□□□ 1.04
PSEN1-217ENST00000556533 CLUAP1Q96AJ1 413 aa21.53■■□□□ 1.04
PSEN1-217ENST00000556533 USP44Q9H0E7 712 aa21.53■■□□□ 1.04
PSEN1-217ENST00000556533 TNNQ9UQP3 1299 aa21.53■■□□□ 1.04
PSEN1-217ENST00000556533 C6orf229H3BNL8 230 aa21.52■■□□□ 1.04
PSEN1-217ENST00000556533 IGHMBP2P38935 993 aaKnown RBP21.52■■□□□ 1.04
PSEN1-217ENST00000556533 ZKSCAN2Q63HK3 967 aa21.52■■□□□ 1.04
PSEN1-217ENST00000556533 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
PSEN1-217ENST00000556533 ANKIB1Q9P2G1 1089 aa21.52■■□□□ 1.04
PSEN1-217ENST00000556533 ANKRD18BA2A2Z9 1011 aa21.51■■□□□ 1.03
PSEN1-217ENST00000556533 PPIP5K2O43314 1243 aa21.51■■□□□ 1.03
PSEN1-217ENST00000556533 TRIM27P14373 513 aa21.51■■□□□ 1.03
PSEN1-217ENST00000556533 IFIT5Q13325 482 aaKnown RBP21.51■■□□□ 1.03
PSEN1-217ENST00000556533 ATF7IPQ6VMQ6 1270 aa21.51■■□□□ 1.03
PSEN1-217ENST00000556533 JDP2Q8WYK2 163 aa21.51■■□□□ 1.03
PSEN1-217ENST00000556533 UTYO14607 1347 aa21.51■■□□□ 1.03
PSEN1-217ENST00000556533 RTL9Q8NET4 1388 aa21.5■■□□□ 1.03
PSEN1-217ENST00000556533 SNED1Q8TER0 1413 aa21.5■■□□□ 1.03
PSEN1-217ENST00000556533 AOC3Q16853 763 aa21.5■■□□□ 1.03
PSEN1-217ENST00000556533 DPY19L2Q6NUT2 758 aa21.5■■□□□ 1.03
PSEN1-217ENST00000556533 MPHOSPH8Q99549 860 aa21.5■■□□□ 1.03
PSEN1-217ENST00000556533 KDM2BQ8NHM5 1336 aa21.5■■□□□ 1.03
PSEN1-217ENST00000556533 ZC3H4Q9UPT8 1303 aaKnown RBP21.5■■□□□ 1.03
PSEN1-217ENST00000556533 COL4A1P02462 1669 aa21.5■■□□□ 1.03
PSEN1-217ENST00000556533 FER1L6Q2WGJ9 1857 aa21.49■■□□□ 1.03
PSEN1-217ENST00000556533 CCDC57Q2TAC2 916 aa21.49■■□□□ 1.03
PSEN1-217ENST00000556533 TAF7LQ5H9L4 462 aa21.49■■□□□ 1.03
PSEN1-217ENST00000556533 KAZALD1Q96I82 304 aa21.49■■□□□ 1.03
PSEN1-217ENST00000556533 RTFDC1Q9BY42 306 aaPredicted RBP21.49■■□□□ 1.03
PSEN1-217ENST00000556533 BICC1Q9H694 974 aaKnown RBP21.49■■□□□ 1.03
PSEN1-217ENST00000556533 BSDC1Q9NW68 430 aaPredicted RBP21.49■■□□□ 1.03
PSEN1-217ENST00000556533 TAF1P21675 1872 aa21.49■■□□□ 1.03
PSEN1-217ENST00000556533 GLTPD2A6NH11 291 aa21.48■■□□□ 1.03
PSEN1-217ENST00000556533 RIMBP2O15034 1052 aa21.48■■□□□ 1.03
PSEN1-217ENST00000556533 INTS3Q68E01 1043 aaKnown RBP21.48■■□□□ 1.03
PSEN1-217ENST00000556533 NIM1KQ8IY84 436 aa21.48■■□□□ 1.03
PSEN1-217ENST00000556533 GPR101Q96P66 508 aaPredicted RBP21.48■■□□□ 1.03
PSEN1-217ENST00000556533 NMRK2Q9NPI5 230 aa21.48■■□□□ 1.03
PSEN1-217ENST00000556533 POLLQ9UGP5 575 aa21.48■■□□□ 1.03
PSEN1-217ENST00000556533 UFL1O94874 794 aa21.47■■□□□ 1.03
PSEN1-217ENST00000556533 UBTFL1P0CB47 393 aaPredicted RBP21.47■■□□□ 1.03
PSEN1-217ENST00000556533 WASHC4Q2M389 1173 aa21.47■■□□□ 1.03
PSEN1-217ENST00000556533 TBC1D16Q8TBP0 767 aa21.47■■□□□ 1.03
PSEN1-217ENST00000556533 ZNF594Q96JF6 807 aaPredicted RBP21.47■■□□□ 1.03
PSEN1-217ENST00000556533 RRAGCQ9HB90 399 aa21.47■■□□□ 1.03
PSEN1-217ENST00000556533 GGA1Q9UJY5 639 aa21.47■■□□□ 1.03
PSEN1-217ENST00000556533 MINPP1Q9UNW1 487 aa21.47■■□□□ 1.03
PSEN1-217ENST00000556533 SBF1O95248 1867 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms