RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
CRX-203ENST00000556527 TMPOP42166 694 aaKnown RBP12.78□□□□□ -0.36
CRX-203ENST00000556527 GRAPQ13588 217 aa12.78□□□□□ -0.36
CRX-203ENST00000556527 PDIA6Q15084 440 aa12.78□□□□□ -0.36
CRX-203ENST00000556527 RALBP1Q15311 655 aa12.78□□□□□ -0.36
CRX-203ENST00000556527 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
CRX-203ENST00000556527 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
CRX-203ENST00000556527 RTFDC1Q9BY42 306 aaPredicted RBP12.78□□□□□ -0.36
CRX-203ENST00000556527 TLL2Q9Y6L7 1015 aa12.78□□□□□ -0.36
CRX-203ENST00000556527 CDHR2Q9BYE9 1310 aa12.78□□□□□ -0.36
CRX-203ENST00000556527 H7C1D1 291 aa12.77□□□□□ -0.37
CRX-203ENST00000556527 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.37
CRX-203ENST00000556527 KIAA2012Q0VF49 1180 aa12.77□□□□□ -0.37
CRX-203ENST00000556527 TCIRG1Q13488 830 aa12.77□□□□□ -0.37
CRX-203ENST00000556527 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
CRX-203ENST00000556527 CST9Q5W186 159 aa12.77□□□□□ -0.37
CRX-203ENST00000556527 ABHD8Q96I13 439 aa12.77□□□□□ -0.37
CRX-203ENST00000556527 LTBP1Q14766 1721 aa12.76□□□□□ -0.37
CRX-203ENST00000556527 CA12O43570 354 aa12.76□□□□□ -0.37
CRX-203ENST00000556527 MAP2K2P36507 400 aa12.76□□□□□ -0.37
CRX-203ENST00000556527 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
CRX-203ENST00000556527 LRP10Q7Z4F1 713 aa12.76□□□□□ -0.37
CRX-203ENST00000556527 ZC3H15Q8WU90 426 aaKnown RBP12.76□□□□□ -0.37
CRX-203ENST00000556527 GLIS2Q9BZE0 524 aaPredicted RBP12.76□□□□□ -0.37
CRX-203ENST00000556527 G3V3G9 751 aa12.75□□□□□ -0.37
CRX-203ENST00000556527 C6orf229H3BNL8 230 aa12.75□□□□□ -0.37
CRX-203ENST00000556527 WASHC4Q2M389 1173 aa12.75□□□□□ -0.37
CRX-203ENST00000556527 DCAF8Q5TAQ9 597 aa12.75□□□□□ -0.37
CRX-203ENST00000556527 CDC37L1Q7L3B6 337 aa12.75□□□□□ -0.37
CRX-203ENST00000556527 CCDC146Q8IYE0 955 aa12.75□□□□□ -0.37
CRX-203ENST00000556527 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
CRX-203ENST00000556527 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
CRX-203ENST00000556527 CNOT7Q9UIV1 285 aaKnown RBP12.75□□□□□ -0.37
CRX-203ENST00000556527 NSFL1CQ9UNZ2 370 aaKnown RBP12.75□□□□□ -0.37
CRX-203ENST00000556527 CCDC85CA6NKD9 419 aa12.74□□□□□ -0.37
CRX-203ENST00000556527 AOC2O75106 756 aa12.74□□□□□ -0.37
CRX-203ENST00000556527 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
CRX-203ENST00000556527 SAPCD2Q86UD0 394 aa12.74□□□□□ -0.37
CRX-203ENST00000556527 PLBD2Q8NHP8 589 aa12.74□□□□□ -0.37
CRX-203ENST00000556527 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
CRX-203ENST00000556527 EYA3Q99504 573 aa12.74□□□□□ -0.37
CRX-203ENST00000556527 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
CRX-203ENST00000556527 HSP90B1P14625 803 aaKnown RBP12.73□□□□□ -0.37
CRX-203ENST00000556527 MICALL2Q8IY33 904 aa12.73□□□□□ -0.37
CRX-203ENST00000556527 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
CRX-203ENST00000556527 FAM89AQ96GI7 184 aa12.73□□□□□ -0.37
CRX-203ENST00000556527 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
CRX-203ENST00000556527 HYPKQ9NX55 129 aa12.73□□□□□ -0.37
CRX-203ENST00000556527 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
CRX-203ENST00000556527 MYBBP1AQ9BQG0 1328 aaKnown RBP12.72□□□□□ -0.37
CRX-203ENST00000556527 ATP5J2-PTCD1G3V325 749 aa12.72□□□□□ -0.37
CRX-203ENST00000556527 CHL1O00533 1208 aa12.72□□□□□ -0.37
CRX-203ENST00000556527 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
CRX-203ENST00000556527 HOXB7P09629 217 aa12.72□□□□□ -0.37
CRX-203ENST00000556527 BRPF1P55201 1214 aaPredicted RBP12.72□□□□□ -0.37
CRX-203ENST00000556527 KRT24Q2M2I5 525 aa12.72□□□□□ -0.37
CRX-203ENST00000556527 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
CRX-203ENST00000556527 TRPM4Q8TD43 1214 aa12.72□□□□□ -0.37
CRX-203ENST00000556527 DCPSQ96C86 337 aaKnown RBP12.72□□□□□ -0.37
CRX-203ENST00000556527 PGAP2Q9UHJ9 254 aa12.72□□□□□ -0.37
CRX-203ENST00000556527 ANKRD36CQ5JPF3 1778 aa12.71□□□□□ -0.37
CRX-203ENST00000556527 HUNKP57058 714 aa12.71□□□□□ -0.37
CRX-203ENST00000556527 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
CRX-203ENST00000556527 NOGQ13253 232 aa12.71□□□□□ -0.37
CRX-203ENST00000556527 KRT26Q7Z3Y9 468 aa12.71□□□□□ -0.37
CRX-203ENST00000556527 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.37
CRX-203ENST00000556527 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
CRX-203ENST00000556527 DPF2Q92785 391 aa12.71□□□□□ -0.37
CRX-203ENST00000556527 DBNDD1Q9H9R9 158 aa12.71□□□□□ -0.37
CRX-203ENST00000556527 ZBTB12Q9Y330 459 aaPredicted RBP12.71□□□□□ -0.37
CRX-203ENST00000556527 TRPM7Q96QT4 1865 aa12.71□□□□□ -0.37
CRX-203ENST00000556527 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
CRX-203ENST00000556527 YDJCA8MPS7 323 aa12.7□□□□□ -0.38
CRX-203ENST00000556527 PSMD14O00487 310 aa12.7□□□□□ -0.38
CRX-203ENST00000556527 IRS4O14654 1257 aaPredicted RBP12.7□□□□□ -0.38
CRX-203ENST00000556527 RPS12P25398 132 aaKnown RBP12.7□□□□□ -0.38
CRX-203ENST00000556527 HIRAP54198 1017 aaPredicted RBP12.7□□□□□ -0.38
CRX-203ENST00000556527 FAM161AQ3B820 660 aa12.7□□□□□ -0.38
CRX-203ENST00000556527 TBC1D10BQ4KMP7 808 aaPredicted RBP12.7□□□□□ -0.38
CRX-203ENST00000556527 RBM26Q5T8P6 1007 aaKnown RBP12.7□□□□□ -0.38
CRX-203ENST00000556527 C2orf69Q8N8R5 385 aa12.7□□□□□ -0.38
CRX-203ENST00000556527 ZC3H12CQ9C0D7 883 aaKnown RBP12.7□□□□□ -0.38
CRX-203ENST00000556527 ANKIB1Q9P2G1 1089 aa12.7□□□□□ -0.38
CRX-203ENST00000556527 ECE2O60344 883 aa12.69□□□□□ -0.38
CRX-203ENST00000556527 MLLT1Q03111 559 aaPredicted RBP12.69□□□□□ -0.38
CRX-203ENST00000556527 CALD1Q05682 793 aaKnown RBP12.69□□□□□ -0.38
CRX-203ENST00000556527 SF3B3Q15393 1217 aaKnown RBP12.69□□□□□ -0.38
CRX-203ENST00000556527 DOK7Q18PE1 504 aa12.69□□□□□ -0.38
CRX-203ENST00000556527 DUSP27Q5VZP5 1158 aa12.69□□□□□ -0.38
CRX-203ENST00000556527 SAMD7Q7Z3H4 446 aa12.69□□□□□ -0.38
CRX-203ENST00000556527 SULF1Q8IWU6 871 aa12.69□□□□□ -0.38
CRX-203ENST00000556527 CELF1Q92879 486 aaKnown RBP12.69□□□□□ -0.38
CRX-203ENST00000556527 LAMB2P55268 1798 aa12.69□□□□□ -0.38
CRX-203ENST00000556527 SHTN1A0MZ66 631 aa12.68□□□□□ -0.38
CRX-203ENST00000556527 RPS8P62241 208 aaKnown RBP12.68□□□□□ -0.38
CRX-203ENST00000556527 GPSM2P81274 684 aa12.68□□□□□ -0.38
CRX-203ENST00000556527 DDX10Q13206 875 aaKnown RBP12.68□□□□□ -0.38
CRX-203ENST00000556527 ISCA1Q9BUE6 129 aa12.68□□□□□ -0.38
CRX-203ENST00000556527 GBA2Q9HCG7 927 aaPredicted RBP12.68□□□□□ -0.38
CRX-203ENST00000556527 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms