RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 ZSCAN31Q96LW9 406 aaPredicted RBP6.48□□□□□ -1.37
GPHN-213ENST00000556501 JAKMIP1Q96N16 626 aaKnown RBP6.48□□□□□ -1.37
GPHN-213ENST00000556501 SGIP1Q9BQI5 828 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 ZSWIM6Q9HCJ5 1215 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 SH2B1Q9NRF2 756 aaPredicted RBP6.48□□□□□ -1.37
GPHN-213ENST00000556501 RBM27Q9P2N5 1060 aaKnown RBP6.48□□□□□ -1.37
GPHN-213ENST00000556501 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.48□□□□□ -1.37
GPHN-213ENST00000556501 RBM8AQ9Y5S9 174 aaKnown RBP6.48□□□□□ -1.37
GPHN-213ENST00000556501 USP16Q9Y5T5 823 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 CYP46A1Q9Y6A2 500 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 ZNF609O15014 1411 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 TCHHQ07283 1943 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 LAMA4Q16363 1823 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 SOS2Q07890 1332 aaPredicted RBP6.48□□□□□ -1.37
GPHN-213ENST00000556501 A0A0D9SFI3 127 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 ERVV-2B6SEH9 535 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 LARGE1O95461 756 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 ZSCAN22P10073 491 aaPredicted RBP6.47□□□□□ -1.37
GPHN-213ENST00000556501 ZKSCAN1P17029 563 aaPredicted RBP6.47□□□□□ -1.37
GPHN-213ENST00000556501 ATP5JP18859 108 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 PTPN12Q05209 780 aaKnown RBP6.47□□□□□ -1.37
GPHN-213ENST00000556501 TNNI3KQ59H18 835 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 FOXD4L5Q5VV16 416 aaPredicted RBP6.47□□□□□ -1.37
GPHN-213ENST00000556501 CREB3L3Q68CJ9 461 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 PRPF40BQ6NWY9 871 aaKnown RBP6.47□□□□□ -1.37
GPHN-213ENST00000556501 LRSAM1Q6UWE0 723 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 UBE3BQ7Z3V4 1068 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 FOXD4L4Q8WXT5 416 aaPredicted RBP6.47□□□□□ -1.37
GPHN-213ENST00000556501 MAP4K1Q92918 833 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 SYAP1Q96A49 352 aaPredicted RBP6.47□□□□□ -1.37
GPHN-213ENST00000556501 CHAMP1Q96JM3 812 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 FAM227BQ96M60 508 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 FSD1Q9BTV5 496 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 BCL11BQ9C0K0 894 aaPredicted RBP6.47□□□□□ -1.37
GPHN-213ENST00000556501 CCDC8Q9H0W5 538 aaPredicted RBP6.47□□□□□ -1.37
GPHN-213ENST00000556501 SIL1Q9H173 461 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 ALDH8A1Q9H2A2 487 aaPredicted RBP6.47□□□□□ -1.37
GPHN-213ENST00000556501 PRDM11Q9NQV5 511 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 PDRG1Q9NUG6 133 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 TMEM63CQ9P1W3 806 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 FPGT-TNNI3KV9GXZ4 949 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 ITGB4P16144 1822 aa6.47□□□□□ -1.37
GPHN-213ENST00000556501 COL14A1Q05707 1796 aaKnown RBP6.46□□□□□ -1.37
GPHN-213ENST00000556501 MYH15Q9Y2K3 1946 aa6.46□□□□□ -1.37
GPHN-213ENST00000556501 PALLDQ8WX93 1383 aa6.46□□□□□ -1.37
GPHN-213ENST00000556501 ESPNB1AK53 854 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 NBPF26B4DH59 902 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 H7C1W4 665 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 HAX1O00165 279 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 SLC27A2O14975 620 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 STX6O43752 255 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 CPA1P15085 419 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 PSMA5P28066 241 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 ST3GAL1Q11201 340 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 TFCP2Q12800 502 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 ADCK5Q3MIX3 580 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 TSGA10IPQ3SY00 556 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 NBPF14Q5TI25 921 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 RNF20Q5VTR2 975 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 USPL1Q5W0Q7 1092 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 NBPF10Q6P3W6 841 aaKnown RBP6.46□□□□□ -1.38
GPHN-213ENST00000556501 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.46□□□□□ -1.38
GPHN-213ENST00000556501 TICAM2Q86XR7 235 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 DDX60Q8IY21 1712 aaKnown RBP6.46□□□□□ -1.38
GPHN-213ENST00000556501 NBPF15Q8N660 670 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 KLHDC4Q8TBB5 520 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 ZCRB1Q8TBF4 217 aaKnown RBP6.46□□□□□ -1.38
GPHN-213ENST00000556501 ANP32BQ92688 251 aaKnown RBP6.46□□□□□ -1.38
GPHN-213ENST00000556501 FAM212AQ96EL1 285 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 PDLIM2Q96JY6 352 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 CARD10Q9BWT7 1032 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 RBSNQ9H1K0 784 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 HMG20BQ9P0W2 317 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 DBNLQ9UJU6 430 aaKnown RBP6.46□□□□□ -1.38
GPHN-213ENST00000556501 NSFL1CQ9UNZ2 370 aaKnown RBP6.46□□□□□ -1.38
GPHN-213ENST00000556501 SMC3Q9UQE7 1217 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 STK24Q9Y6E0 443 aa6.46□□□□□ -1.38
GPHN-213ENST00000556501 MYH7P12883 1935 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 A0A087WZG4 1122 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 SYCE3A1L190 88 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 PHF14O94880 888 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 F13A1P00488 732 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 PDIA4P13667 645 aaKnown RBP6.45□□□□□ -1.38
GPHN-213ENST00000556501 SYT1P21579 422 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 RPS6KB1P23443 525 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 KCNJ4P48050 445 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 PIP4K2AP48426 406 aaPredicted RBP6.45□□□□□ -1.38
GPHN-213ENST00000556501 PRIM1P49642 420 aaKnown RBP6.45□□□□□ -1.38
GPHN-213ENST00000556501 FOXO4P98177 505 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 HS1BP3Q53T59 392 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 CCDC83Q8IWF9 413 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 TRIM44Q96DX7 344 aaPredicted RBP6.45□□□□□ -1.38
GPHN-213ENST00000556501 BOLA2Q9H3K6 86 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 GPR108Q9NPR9 543 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 CWC25Q9NXE8 425 aaPredicted RBP6.45□□□□□ -1.38
GPHN-213ENST00000556501 ATP6V1DQ9Y5K8 247 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 LRP5O75197 1615 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 COL22A1Q8NFW1 1626 aaPredicted RBP6.45□□□□□ -1.38
GPHN-213ENST00000556501 SH3TC1Q8TE82 1336 aa6.45□□□□□ -1.38
GPHN-213ENST00000556501 ARAP2Q8WZ64 1704 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms