RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 NRG1Q02297 640 aaPredicted RBP9.47□□□□□ -0.89
PCNX4-212ENST00000556360 DTWD1Q8N5C7 304 aa9.47□□□□□ -0.89
PCNX4-212ENST00000556360 LPIN3Q9BQK8 851 aa9.47□□□□□ -0.89
PCNX4-212ENST00000556360 MICAL2O94851 1124 aa9.46□□□□□ -0.9
PCNX4-212ENST00000556360 GRIK5Q16478 980 aa9.46□□□□□ -0.9
PCNX4-212ENST00000556360 TTC9Q92623 222 aa9.46□□□□□ -0.9
PCNX4-212ENST00000556360 ZBTB42B2RXF5 422 aa9.45□□□□□ -0.9
PCNX4-212ENST00000556360 GPLD1P80108 840 aa9.45□□□□□ -0.9
PCNX4-212ENST00000556360 C11orf91Q3C1V1 193 aa9.45□□□□□ -0.9
PCNX4-212ENST00000556360 DHX32Q7L7V1 743 aaKnown RBP9.45□□□□□ -0.9
PCNX4-212ENST00000556360 FAM35AQ86V20 835 aa9.45□□□□□ -0.9
PCNX4-212ENST00000556360 IFT43Q96FT9 208 aa9.45□□□□□ -0.9
PCNX4-212ENST00000556360 SSBP4Q9BWG4 385 aaPredicted RBP9.45□□□□□ -0.9
PCNX4-212ENST00000556360 EGFRP00533 1210 aa9.44□□□□□ -0.9
PCNX4-212ENST00000556360 MSL1Q68DK7 614 aa9.44□□□□□ -0.9
PCNX4-212ENST00000556360 SHISA2Q6UWI4 295 aa9.44□□□□□ -0.9
PCNX4-212ENST00000556360 OPLAHO14841 1288 aa9.43□□□□□ -0.9
PCNX4-212ENST00000556360 PRSS36Q5K4E3 855 aa9.43□□□□□ -0.9
PCNX4-212ENST00000556360 PERM1Q5SV97 790 aa9.43□□□□□ -0.9
PCNX4-212ENST00000556360 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-212ENST00000556360 KRTAP4-8Q9BYQ9 185 aa9.43□□□□□ -0.9
PCNX4-212ENST00000556360 CPB1P15086 417 aa9.42□□□□□ -0.9
PCNX4-212ENST00000556360 TARSP26639 723 aaKnown RBP9.42□□□□□ -0.9
PCNX4-212ENST00000556360 NRLP54845 237 aa9.42□□□□□ -0.9
PCNX4-212ENST00000556360 FBXO11Q86XK2 927 aa9.42□□□□□ -0.9
PCNX4-212ENST00000556360 FAM200AQ8TCP9 573 aa9.42□□□□□ -0.9
PCNX4-212ENST00000556360 VTI1AQ96AJ9 217 aa9.42□□□□□ -0.9
PCNX4-212ENST00000556360 LRFN2Q9ULH4 789 aa9.42□□□□□ -0.9
PCNX4-212ENST00000556360 HOXD8P13378 290 aaPredicted RBP9.41□□□□□ -0.9
PCNX4-212ENST00000556360 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCNX4-212ENST00000556360 RARAP10276 462 aa9.4□□□□□ -0.9
PCNX4-212ENST00000556360 PLAURQ03405 335 aa9.4□□□□□ -0.9
PCNX4-212ENST00000556360 SWI5Q1ZZU3 235 aa9.4□□□□□ -0.9
PCNX4-212ENST00000556360 RTCBQ9Y3I0 505 aaKnown RBP9.4□□□□□ -0.9
PCNX4-212ENST00000556360 SASH3O75995 380 aa9.39□□□□□ -0.91
PCNX4-212ENST00000556360 KRT25Q7Z3Z0 450 aa9.39□□□□□ -0.91
PCNX4-212ENST00000556360 TLR7Q9NYK1 1049 aaKnown RBP9.39□□□□□ -0.91
PCNX4-212ENST00000556360 ARID4AP29374 1257 aaPredicted RBP9.38□□□□□ -0.91
PCNX4-212ENST00000556360 FKBP5Q13451 457 aaPredicted RBP9.38□□□□□ -0.91
PCNX4-212ENST00000556360 ELOAQ14241 798 aaKnown RBP9.38□□□□□ -0.91
PCNX4-212ENST00000556360 ELMSAN1Q6PJG2 1045 aa9.38□□□□□ -0.91
PCNX4-212ENST00000556360 WFDC8Q8IUA0 241 aa9.38□□□□□ -0.91
PCNX4-212ENST00000556360 NOVA2Q9UNW9 492 aaKnown RBP9.38□□□□□ -0.91
PCNX4-212ENST00000556360 ACIN1Q9UKV3 1341 aaKnown RBP9.37□□□□□ -0.91
PCNX4-212ENST00000556360 OCLNQ16625 522 aa9.37□□□□□ -0.91
PCNX4-212ENST00000556360 COX20Q5RI15 118 aa9.37□□□□□ -0.91
PCNX4-212ENST00000556360 ARTNQ5T4W7 220 aa9.37□□□□□ -0.91
PCNX4-212ENST00000556360 TREML1Q86YW5 311 aa9.37□□□□□ -0.91
PCNX4-212ENST00000556360 USP21Q9UK80 565 aa9.37□□□□□ -0.91
PCNX4-212ENST00000556360 KCNMB2Q9Y691 235 aa9.37□□□□□ -0.91
PCNX4-212ENST00000556360 XYLBO75191 536 aa9.36□□□□□ -0.91
PCNX4-212ENST00000556360 SOX18P35713 384 aa9.36□□□□□ -0.91
PCNX4-212ENST00000556360 MLLT1Q03111 559 aaPredicted RBP9.36□□□□□ -0.91
PCNX4-212ENST00000556360 COL26A1Q96A83 441 aa9.36□□□□□ -0.91
PCNX4-212ENST00000556360 DEAF1O75398 565 aaPredicted RBP9.35□□□□□ -0.91
PCNX4-212ENST00000556360 FAM69CQ0P6D2 419 aa9.35□□□□□ -0.91
PCNX4-212ENST00000556360 IGF2-ASQ6U949 168 aa9.35□□□□□ -0.91
PCNX4-212ENST00000556360 WFDC12Q8WWY7 111 aa9.35□□□□□ -0.91
PCNX4-212ENST00000556360 TP53INP1Q96A56 240 aa9.35□□□□□ -0.91
PCNX4-212ENST00000556360 SMG9Q9H0W8 520 aaKnown RBP9.35□□□□□ -0.91
PCNX4-212ENST00000556360 ZNF777Q9ULD5 760 aaPredicted RBP9.35□□□□□ -0.91
PCNX4-212ENST00000556360 ZMIZ1Q9ULJ6 1067 aa9.35□□□□□ -0.91
PCNX4-212ENST00000556360 SCO2A0A1W2PP80 73 aa9.34□□□□□ -0.91
PCNX4-212ENST00000556360 DLL1O00548 723 aa9.34□□□□□ -0.91
PCNX4-212ENST00000556360 RFX1P22670 979 aa9.34□□□□□ -0.91
PCNX4-212ENST00000556360 ZFP64Q9NPA5 681 aa9.34□□□□□ -0.91
PCNX4-212ENST00000556360 USP20Q9Y2K6 914 aa9.34□□□□□ -0.91
PCNX4-212ENST00000556360 NOS3P29474 1203 aa9.33□□□□□ -0.92
PCNX4-212ENST00000556360 SRPK2P78362 688 aaKnown RBP9.33□□□□□ -0.92
PCNX4-212ENST00000556360 ETFBKMTQ8IXQ9 262 aa9.33□□□□□ -0.92
PCNX4-212ENST00000556360 RGL4Q8IZJ4 473 aa9.33□□□□□ -0.92
PCNX4-212ENST00000556360 MMP20O60882 483 aa9.32□□□□□ -0.92
PCNX4-212ENST00000556360 PSAPP07602 524 aa9.32□□□□□ -0.92
PCNX4-212ENST00000556360 EIF2AK2P19525 551 aaKnown RBP9.32□□□□□ -0.92
PCNX4-212ENST00000556360 CDCA8Q53HL2 280 aa9.32□□□□□ -0.92
PCNX4-212ENST00000556360 PLD4Q96BZ4 506 aa9.32□□□□□ -0.92
PCNX4-212ENST00000556360 PRIMPOLQ96LW4 560 aa9.32□□□□□ -0.92
PCNX4-212ENST00000556360 SRA1Q9HD15 236 aaKnown RBP9.32□□□□□ -0.92
PCNX4-212ENST00000556360 LOC102724428A0A0B4J2F2 783 aa9.31□□□□□ -0.92
PCNX4-212ENST00000556360 SIK1P57059 783 aa9.31□□□□□ -0.92
PCNX4-212ENST00000556360 LRP8Q14114 963 aa9.31□□□□□ -0.92
PCNX4-212ENST00000556360 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
PCNX4-212ENST00000556360 HFE2Q6ZVN8 426 aa9.31□□□□□ -0.92
PCNX4-212ENST00000556360 CMTR1Q8N1G2 835 aaKnown RBP9.31□□□□□ -0.92
PCNX4-212ENST00000556360 PSMG3-AS1Q96PY0 264 aa9.31□□□□□ -0.92
PCNX4-212ENST00000556360 IREB2P48200 963 aaKnown RBP9.3□□□□□ -0.92
PCNX4-212ENST00000556360 SAP130Q9H0E3 1048 aa9.3□□□□□ -0.92
PCNX4-212ENST00000556360 TNFRSF10BO14763 440 aa9.29□□□□□ -0.92
PCNX4-212ENST00000556360 PRMT3O60678 531 aa9.29□□□□□ -0.92
PCNX4-212ENST00000556360 BRD2P25440 801 aaKnown RBP9.29□□□□□ -0.92
PCNX4-212ENST00000556360 TRIP4Q15650 581 aaPredicted RBP9.29□□□□□ -0.92
PCNX4-212ENST00000556360 STK32AQ8WU08 396 aa9.29□□□□□ -0.92
PCNX4-212ENST00000556360 MEGF10Q96KG7 1140 aa9.29□□□□□ -0.92
PCNX4-212ENST00000556360 J3QW42 95 aa9.28□□□□□ -0.92
PCNX4-212ENST00000556360 FAM26DQ5JW98 314 aa9.28□□□□□ -0.92
PCNX4-212ENST00000556360 NLRP13Q86W25 1043 aa9.28□□□□□ -0.92
PCNX4-212ENST00000556360 MAP4K3Q8IVH8 894 aa9.28□□□□□ -0.92
PCNX4-212ENST00000556360 DZIP1LQ8IYY4 767 aaKnown RBP9.28□□□□□ -0.92
PCNX4-212ENST00000556360 CACTIN-AS1Q8N1I8 211 aa9.28□□□□□ -0.92
PCNX4-212ENST00000556360 TMEM130Q8N3G9 435 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms