RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 PTPN12Q05209 780 aaKnown RBP6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 TAF1CQ15572 869 aaPredicted RBP6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 HS2ST1Q7LGA3 356 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 C1orf127Q8N9H9 656 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 DHX38Q92620 1227 aaKnown RBP6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 GPAMQ9HCL2 828 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 SRA1Q9HD15 236 aaKnown RBP6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 NPHS2Q9NP85 383 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 FAM8A1Q9UBU6 413 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 INPP5FQ9Y2H2 1132 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 USP17L7P0C7H9 530 aa6.23□□□□□ -1.41
SPTLC2-204ENST00000556264 DNAJA1P31689 397 aaKnown RBP6.23□□□□□ -1.41
SPTLC2-204ENST00000556264 TYRO3Q06418 890 aa6.23□□□□□ -1.41
SPTLC2-204ENST00000556264 MMRN1Q13201 1228 aa6.23□□□□□ -1.41
SPTLC2-204ENST00000556264 MRPL14Q6P1L8 145 aaKnown RBP6.23□□□□□ -1.41
SPTLC2-204ENST00000556264 GALNT12Q8IXK2 581 aa6.23□□□□□ -1.41
SPTLC2-204ENST00000556264 DNAJC2Q99543 621 aaKnown RBP6.23□□□□□ -1.41
SPTLC2-204ENST00000556264 BCO2Q9BYV7 579 aa6.23□□□□□ -1.41
SPTLC2-204ENST00000556264 CHRDQ9H2X0 955 aa6.23□□□□□ -1.41
SPTLC2-204ENST00000556264 ABI2Q9NYB9 513 aaPredicted RBP6.23□□□□□ -1.41
SPTLC2-204ENST00000556264 SMARCA5O60264 1052 aaPredicted RBP6.22□□□□□ -1.41
SPTLC2-204ENST00000556264 GTF2F1P35269 517 aaKnown RBP eCLIP6.22□□□□□ -1.41
SPTLC2-204ENST00000556264 TTC39BQ5VTQ0 682 aaPredicted RBP6.22□□□□□ -1.41
SPTLC2-204ENST00000556264 DPH6Q7L8W6 267 aa6.22□□□□□ -1.41
SPTLC2-204ENST00000556264 NLRP13Q86W25 1043 aa6.22□□□□□ -1.41
SPTLC2-204ENST00000556264 PMEPA1Q969W9 287 aa6.22□□□□□ -1.41
SPTLC2-204ENST00000556264 ZCCHC2Q9C0B9 1178 aaKnown RBP6.22□□□□□ -1.41
SPTLC2-204ENST00000556264 SRCIN1Q9C0H9 1055 aa6.22□□□□□ -1.41
SPTLC2-204ENST00000556264 RUBCNLQ9H714 662 aa6.22□□□□□ -1.41
SPTLC2-204ENST00000556264 EGFRP00533 1210 aa6.21□□□□□ -1.42
SPTLC2-204ENST00000556264 CES1P23141 567 aa6.21□□□□□ -1.42
SPTLC2-204ENST00000556264 ST13P50502 369 aaKnown RBP6.21□□□□□ -1.42
SPTLC2-204ENST00000556264 ARID5AQ03989 594 aa6.21□□□□□ -1.42
SPTLC2-204ENST00000556264 SCARF1Q14162 830 aa6.21□□□□□ -1.42
SPTLC2-204ENST00000556264 PGBD3Q8N328 593 aa6.21□□□□□ -1.42
SPTLC2-204ENST00000556264 GMLQ99445 158 aa6.21□□□□□ -1.42
SPTLC2-204ENST00000556264 CRISPLD1Q9H336 500 aa6.21□□□□□ -1.42
SPTLC2-204ENST00000556264 SUV39H2Q9H5I1 410 aa6.21□□□□□ -1.42
SPTLC2-204ENST00000556264 BRD7Q9NPI1 651 aa6.21□□□□□ -1.42
SPTLC2-204ENST00000556264 SASH3O75995 380 aa6.2□□□□□ -1.42
SPTLC2-204ENST00000556264 F11P03951 625 aa6.2□□□□□ -1.42
SPTLC2-204ENST00000556264 GRM2Q14416 872 aa6.2□□□□□ -1.42
SPTLC2-204ENST00000556264 VPS37DQ86XT2 251 aa6.2□□□□□ -1.42
SPTLC2-204ENST00000556264 GAS2L1Q99501 681 aaPredicted RBP6.2□□□□□ -1.42
SPTLC2-204ENST00000556264 COPRSQ9NQ92 184 aa6.2□□□□□ -1.42
SPTLC2-204ENST00000556264 PPP4R2Q9NY27 417 aa6.2□□□□□ -1.42
SPTLC2-204ENST00000556264 SOS2Q07890 1332 aaPredicted RBP6.2□□□□□ -1.42
SPTLC2-204ENST00000556264 CYP2E1P05181 493 aaPredicted RBP6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 KRT25Q7Z3Z0 450 aa6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 NLRP8Q86W28 1048 aa6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 PUS7Q96PZ0 661 aaKnown RBP6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 LNPKQ9C0E8 428 aa6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 EHD4Q9H223 541 aa6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 C11orf16Q9NQ32 467 aa6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 LATS2Q9NRM7 1088 aa6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 KCNH4Q9UQ05 1017 aa6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 DYRK1BQ9Y463 629 aa6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.19□□□□□ -1.42
SPTLC2-204ENST00000556264 BMP1P13497 986 aa6.18□□□□□ -1.42
SPTLC2-204ENST00000556264 TARSP26639 723 aaKnown RBP6.18□□□□□ -1.42
SPTLC2-204ENST00000556264 GSTT1P30711 240 aa6.18□□□□□ -1.42
SPTLC2-204ENST00000556264 SAMD5Q5TGI4 173 aa6.18□□□□□ -1.42
SPTLC2-204ENST00000556264 KIAA0319Q5VV43 1072 aa6.18□□□□□ -1.42
SPTLC2-204ENST00000556264 ERMP1Q7Z2K6 904 aa6.18□□□□□ -1.42
SPTLC2-204ENST00000556264 SPATA32Q96LK8 384 aa6.18□□□□□ -1.42
SPTLC2-204ENST00000556264 KANSL3Q9P2N6 904 aa6.18□□□□□ -1.42
SPTLC2-204ENST00000556264 A0A1W2PP55 124 aa6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 HMGB1P09429 215 aaKnown RBP6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 EDN3P14138 238 aa6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 SFSWAPQ12872 951 aaKnown RBP6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 PAK2Q13177 524 aa6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 EFHC2Q5JST6 749 aa6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 GLIS3Q8NEA6 775 aa6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 ARMC5Q96C12 935 aa6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 KBTBD4Q9NVX7 518 aa6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 CUEDC1Q9NWM3 386 aaPredicted RBP6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 TTF2Q9UNY4 1162 aaKnown RBP6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 PDZRN3Q9UPQ7 1066 aa6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 TRAK1Q9UPV9 953 aa6.17□□□□□ -1.42
SPTLC2-204ENST00000556264 FAM187AA6NFU0 413 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 MMP20O60882 483 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 VEGFBP49765 207 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 FCGRTP55899 365 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 KCNQ4P56696 695 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 CCINQ13939 588 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 PEAR1Q5VY43 1037 aaPredicted RBP6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 GIMAP6Q6P9H5 292 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 TRIM46Q7Z4K8 759 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 MCF2L2Q86YR7 1114 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 PMFBP1Q8TBY8 1022 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 ZFP42Q96MM3 310 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 NOC4LQ9BVI4 516 aaKnown RBP6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 GSX2Q9BZM3 304 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 DNMT3LQ9UJW3 386 aa6.16□□□□□ -1.42
SPTLC2-204ENST00000556264 PHF20L1A8MW92 1017 aa6.15□□□□□ -1.42
SPTLC2-204ENST00000556264 POTECB2RU33 542 aa6.15□□□□□ -1.42
SPTLC2-204ENST00000556264 F6X3S4 739 aa6.15□□□□□ -1.42
SPTLC2-204ENST00000556264 ATXN7O15265 892 aaPredicted RBP6.15□□□□□ -1.42
SPTLC2-204ENST00000556264 HSP90B1P14625 803 aaKnown RBP6.15□□□□□ -1.42
SPTLC2-204ENST00000556264 ATF4P18848 351 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms