RNA–Protein interactions for RNA: ENST00000556167.1

PSMA6-212, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-212ENST00000556167 PRPF40BQ6NWY9 871 aaKnown RBP20.55■□□□□ 0.88
PSMA6-212ENST00000556167 UTYO14607 1347 aa20.54■□□□□ 0.88
PSMA6-212ENST00000556167 CTSWP56202 376 aa20.54■□□□□ 0.88
PSMA6-212ENST00000556167 INTS3Q68E01 1043 aaKnown RBP20.54■□□□□ 0.88
PSMA6-212ENST00000556167 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.54■□□□□ 0.88
PSMA6-212ENST00000556167 HDAC5Q9UQL6 1122 aa20.54■□□□□ 0.88
PSMA6-212ENST00000556167 FER1L6Q2WGJ9 1857 aa20.54■□□□□ 0.88
PSMA6-212ENST00000556167 FTSJ3Q8IY81 847 aaKnown RBP20.53■□□□□ 0.88
PSMA6-212ENST00000556167 BBOX1O75936 387 aa20.52■□□□□ 0.88
PSMA6-212ENST00000556167 GRAPQ13588 217 aa20.52■□□□□ 0.88
PSMA6-212ENST00000556167 TMC4Q7Z404 712 aa20.52■□□□□ 0.88
PSMA6-212ENST00000556167 DZIP1LQ8IYY4 767 aaKnown RBP20.52■□□□□ 0.88
PSMA6-212ENST00000556167 GRAPLQ8TC17 118 aaPredicted RBP20.52■□□□□ 0.88
PSMA6-212ENST00000556167 CCDC88AQ3V6T2 1871 aa20.52■□□□□ 0.87
PSMA6-212ENST00000556167 RTL9Q8NET4 1388 aa20.51■□□□□ 0.87
PSMA6-212ENST00000556167 CC2D2BQ6DHV5 1058 aa20.51■□□□□ 0.87
PSMA6-212ENST00000556167 TTLL11Q8NHH1 800 aa20.51■□□□□ 0.87
PSMA6-212ENST00000556167 CLUAP1Q96AJ1 413 aa20.51■□□□□ 0.87
PSMA6-212ENST00000556167 USP44Q9H0E7 712 aa20.51■□□□□ 0.87
PSMA6-212ENST00000556167 TMX4Q9H1E5 349 aaPredicted RBP20.51■□□□□ 0.87
PSMA6-212ENST00000556167 SBF1O95248 1867 aa20.5■□□□□ 0.87
PSMA6-212ENST00000556167 NBPF7P0C2Y1 421 aaPredicted RBP20.5■□□□□ 0.87
PSMA6-212ENST00000556167 GRIPAP1Q4V328 841 aa20.5■□□□□ 0.87
PSMA6-212ENST00000556167 SPEF2Q9C093 1822 aa20.49■□□□□ 0.87
PSMA6-212ENST00000556167 PPEF1O14829 653 aaPredicted RBP20.49■□□□□ 0.87
PSMA6-212ENST00000556167 C21orf2O43822 256 aa20.49■□□□□ 0.87
PSMA6-212ENST00000556167 CSF1RP07333 972 aa20.49■□□□□ 0.87
PSMA6-212ENST00000556167 GOLGB1Q14789 3259 aaKnown RBP20.49■□□□□ 0.87
PSMA6-212ENST00000556167 GNAI3P08754 354 aa20.48■□□□□ 0.87
PSMA6-212ENST00000556167 UBTFL1P0CB47 393 aaPredicted RBP20.48■□□□□ 0.87
PSMA6-212ENST00000556167 CCDC93Q567U6 631 aa20.48■□□□□ 0.87
PSMA6-212ENST00000556167 ARHGAP27Q6ZUM4 889 aa20.48■□□□□ 0.87
PSMA6-212ENST00000556167 C7orf43Q8WVR3 580 aa20.48■□□□□ 0.87
PSMA6-212ENST00000556167 CDC5LQ99459 802 aaKnown RBP20.48■□□□□ 0.87
PSMA6-212ENST00000556167 LRRC37AA6NMS7 1700 aa20.47■□□□□ 0.87
PSMA6-212ENST00000556167 FOXO4P98177 505 aa20.47■□□□□ 0.87
PSMA6-212ENST00000556167 RTKN2Q8IZC4 609 aa20.47■□□□□ 0.87
PSMA6-212ENST00000556167 TMEM57Q8N5G2 664 aa20.47■□□□□ 0.87
PSMA6-212ENST00000556167 SUCLG2Q96I99 432 aa20.47■□□□□ 0.87
PSMA6-212ENST00000556167 TNNQ9UQP3 1299 aa20.47■□□□□ 0.87
PSMA6-212ENST00000556167 DICER1Q9UPY3 1922 aaKnown RBP20.47■□□□□ 0.87
PSMA6-212ENST00000556167 RPS8P62241 208 aaKnown RBP20.46■□□□□ 0.87
PSMA6-212ENST00000556167 SP8Q8IXZ3 490 aa20.46■□□□□ 0.87
PSMA6-212ENST00000556167 CCDC85AQ96PX6 553 aaPredicted RBP20.46■□□□□ 0.87
PSMA6-212ENST00000556167 GREM2Q9H772 168 aa20.46■□□□□ 0.87
PSMA6-212ENST00000556167 ZNF219Q9P2Y4 722 aaPredicted RBP20.46■□□□□ 0.87
PSMA6-212ENST00000556167 ATP6V0A2Q9Y487 856 aa20.46■□□□□ 0.87
PSMA6-212ENST00000556167 LMBR1LQ6UX01 489 aa20.45■□□□□ 0.86
PSMA6-212ENST00000556167 ANKRD18AQ8IVF6 992 aa20.45■□□□□ 0.86
PSMA6-212ENST00000556167 CELF1Q92879 486 aaKnown RBP20.45■□□□□ 0.86
PSMA6-212ENST00000556167 SEC31BQ9NQW1 1179 aa20.45■□□□□ 0.86
PSMA6-212ENST00000556167 CHMP3Q9Y3E7 222 aa20.45■□□□□ 0.86
PSMA6-212ENST00000556167 ANKRD18BA2A2Z9 1011 aa20.44■□□□□ 0.86
PSMA6-212ENST00000556167 ITGA6P23229 1130 aa20.44■□□□□ 0.86
PSMA6-212ENST00000556167 IFIT5Q13325 482 aaKnown RBP20.44■□□□□ 0.86
PSMA6-212ENST00000556167 ITPRIPQ8IWB1 547 aa20.44■□□□□ 0.86
PSMA6-212ENST00000556167 LTBP3Q9NS15 1303 aa20.44■□□□□ 0.86
PSMA6-212ENST00000556167 IGHMBP2P38935 993 aaKnown RBP20.43■□□□□ 0.86
PSMA6-212ENST00000556167 PDE3AQ14432 1141 aa20.43■□□□□ 0.86
PSMA6-212ENST00000556167 CCDC57Q2TAC2 916 aa20.43■□□□□ 0.86
PSMA6-212ENST00000556167 FAM161AQ3B820 660 aa20.43■□□□□ 0.86
PSMA6-212ENST00000556167 RABL6Q3YEC7 729 aaPredicted RBP20.43■□□□□ 0.86
PSMA6-212ENST00000556167 EPHA10Q5JZY3 1008 aa20.43■□□□□ 0.86
PSMA6-212ENST00000556167 KAZALD1Q96I82 304 aa20.43■□□□□ 0.86
PSMA6-212ENST00000556167 MEIS3Q99687 375 aa20.43■□□□□ 0.86
PSMA6-212ENST00000556167 BICC1Q9H694 974 aaKnown RBP20.43■□□□□ 0.86
PSMA6-212ENST00000556167 RLBP1P12271 317 aa20.42■□□□□ 0.86
PSMA6-212ENST00000556167 TAOK3Q9H2K8 898 aa20.42■□□□□ 0.86
PSMA6-212ENST00000556167 CHMP4BQ9H444 224 aaKnown RBP20.42■□□□□ 0.86
PSMA6-212ENST00000556167 PLIN1O60240 522 aa20.41■□□□□ 0.86
PSMA6-212ENST00000556167 FKBP4Q02790 459 aaKnown RBP eCLIP20.41■□□□□ 0.86
PSMA6-212ENST00000556167 PANK1Q8TE04 598 aa20.41■□□□□ 0.86
PSMA6-212ENST00000556167 PSMD1Q99460 953 aa20.41■□□□□ 0.86
PSMA6-212ENST00000556167 MPHOSPH8Q99549 860 aa20.41■□□□□ 0.86
PSMA6-212ENST00000556167 COL4A1P02462 1669 aa20.41■□□□□ 0.86
PSMA6-212ENST00000556167 NFKBIEO00221 500 aa20.4■□□□□ 0.86
PSMA6-212ENST00000556167 TAF7LQ5H9L4 462 aa20.4■□□□□ 0.86
PSMA6-212ENST00000556167 ANKRD44Q8N8A2 993 aa20.4■□□□□ 0.86
PSMA6-212ENST00000556167 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
PSMA6-212ENST00000556167 BSDC1Q9NW68 430 aaPredicted RBP20.4■□□□□ 0.86
PSMA6-212ENST00000556167 GNAI2P04899 355 aa20.39■□□□□ 0.85
PSMA6-212ENST00000556167 LMNB1P20700 586 aa20.39■□□□□ 0.85
PSMA6-212ENST00000556167 MVPQ14764 893 aaKnown RBP20.39■□□□□ 0.85
PSMA6-212ENST00000556167 MPNDQ8N594 471 aa20.39■□□□□ 0.85
PSMA6-212ENST00000556167 SUPT20HQ8NEM7 779 aa20.39■□□□□ 0.85
PSMA6-212ENST00000556167 DDX19BQ9UMR2 479 aa20.39■□□□□ 0.85
PSMA6-212ENST00000556167 LRRFIP2Q9Y608 721 aaKnown RBP20.39■□□□□ 0.85
PSMA6-212ENST00000556167 UTRNP46939 3433 aa20.39■□□□□ 0.85
PSMA6-212ENST00000556167 RRP1P56182 461 aaKnown RBP20.38■□□□□ 0.85
PSMA6-212ENST00000556167 OLFM4Q6UX06 510 aa20.38■□□□□ 0.85
PSMA6-212ENST00000556167 DPP8Q6V1X1 898 aaPredicted RBP20.38■□□□□ 0.85
PSMA6-212ENST00000556167 A0A1B0GUL6 1792 aa20.38■□□□□ 0.85
PSMA6-212ENST00000556167 LTBP1Q14766 1721 aa20.38■□□□□ 0.85
PSMA6-212ENST00000556167 ZBTB7BO15156 539 aaPredicted RBP20.37■□□□□ 0.85
PSMA6-212ENST00000556167 RASSF7Q02833 373 aa20.37■□□□□ 0.85
PSMA6-212ENST00000556167 VPS33BQ9H267 617 aa20.37■□□□□ 0.85
PSMA6-212ENST00000556167 TIAM2Q8IVF5 1701 aa20.36■□□□□ 0.85
PSMA6-212ENST00000556167 RTFDC1Q9BY42 306 aaPredicted RBP20.36■□□□□ 0.85
PSMA6-212ENST00000556167 NSFL1CQ9UNZ2 370 aaKnown RBP20.36■□□□□ 0.85
PSMA6-212ENST00000556167 ANKRD2Q9GZV1 360 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms