RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ADARB2Q9NS39 739 aaKnown RBP10.08□□□□□ -0.8
PTCSC3-201ENST00000556013 PGAP2Q9UHJ9 254 aa10.08□□□□□ -0.8
PTCSC3-201ENST00000556013 GJA3Q9Y6H8 435 aa10.08□□□□□ -0.8
PTCSC3-201ENST00000556013 CNTNAP1P78357 1384 aa10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 RASSF10A6NK89 507 aa10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 DDX58O95786 925 aaKnown RBP10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 HSPA1AP0DMV8 641 aaKnown RBP10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 HSPA1BP0DMV9 641 aaKnown RBP10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 ZEB1P37275 1124 aaPredicted RBP10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 CXCL9Q07325 125 aa10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 GOLGA2Q08379 1002 aa10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 DEFB115Q30KQ5 88 aa10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 CCDC30Q5VVM6 783 aa10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 CIAPIN1Q6FI81 312 aa10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 RIC3Q7Z5B4 369 aa10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 ZBTB38Q8NAP3 1195 aaPredicted RBP10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 GPRC5DQ9NZD1 345 aa10.07□□□□□ -0.8
PTCSC3-201ENST00000556013 CACNA1SQ13698 1873 aa10.06□□□□□ -0.8
PTCSC3-201ENST00000556013 IRS4O14654 1257 aaPredicted RBP10.06□□□□□ -0.8
PTCSC3-201ENST00000556013 TCERG1O14776 1098 aaKnown RBP10.06□□□□□ -0.8
PTCSC3-201ENST00000556013 EPS15P42566 896 aa10.06□□□□□ -0.8
PTCSC3-201ENST00000556013 RPS8P62241 208 aaKnown RBP10.06□□□□□ -0.8
PTCSC3-201ENST00000556013 AOC3Q16853 763 aa10.06□□□□□ -0.8
PTCSC3-201ENST00000556013 COL13A1Q5TAT6 717 aaPredicted RBP10.06□□□□□ -0.8
PTCSC3-201ENST00000556013 DPF2Q92785 391 aa10.06□□□□□ -0.8
PTCSC3-201ENST00000556013 FAM89AQ96GI7 184 aa10.06□□□□□ -0.8
PTCSC3-201ENST00000556013 ATP5J2-PTCD1G3V325 749 aa10.05□□□□□ -0.8
PTCSC3-201ENST00000556013 PCCAP05165 728 aaPredicted RBP10.05□□□□□ -0.8
PTCSC3-201ENST00000556013 MAP1SQ66K74 1059 aaPredicted RBP10.05□□□□□ -0.8
PTCSC3-201ENST00000556013 EYA3Q99504 573 aa10.05□□□□□ -0.8
PTCSC3-201ENST00000556013 PRDM10Q9NQV6 1147 aa10.05□□□□□ -0.8
PTCSC3-201ENST00000556013 PODXL2Q9NZ53 605 aa10.05□□□□□ -0.8
PTCSC3-201ENST00000556013 MKRN1Q9UHC7 482 aaKnown RBP10.05□□□□□ -0.8
PTCSC3-201ENST00000556013 ANKRD36CQ5JPF3 1778 aa10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 H7C1D1 291 aa10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 PDE8AO60658 829 aa10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 VEGFBP49765 207 aa10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 MAP2K1Q02750 393 aaPredicted RBP10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 WASHC4Q2M389 1173 aa10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 C8orf58Q8NAV2 365 aa10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 CELF1Q92879 486 aaKnown RBP10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 METTL22Q9BUU2 404 aaPredicted RBP10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 PHAXQ9H814 394 aaKnown RBP10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 WBP1LQ9NX94 342 aa10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 NSFL1CQ9UNZ2 370 aaKnown RBP10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 IL16Q14005 1332 aa10.04□□□□□ -0.8
PTCSC3-201ENST00000556013 ADAMTSL1Q8N6G6 1762 aa10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 ELL2O00472 640 aaPredicted RBP10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 RPS12P25398 132 aaKnown RBP10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 ECE1P42892 770 aa10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 CCDC152Q4G0S7 254 aa10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 KSR2Q6VAB6 950 aa10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 CDC37L1Q7L3B6 337 aa10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 TNS4Q8IZW8 715 aa10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 HHIPL1Q96JK4 782 aa10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 BCL2L13Q9BXK5 485 aa10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 ZC3H12CQ9C0D7 883 aaKnown RBP10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 CWC25Q9NXE8 425 aaPredicted RBP10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 CNOT7Q9UIV1 285 aaKnown RBP10.03□□□□□ -0.8
PTCSC3-201ENST00000556013 COL4A5P29400 1685 aa10.02□□□□□ -0.8
PTCSC3-201ENST00000556013 CTCFP49711 727 aaPredicted RBP10.02□□□□□ -0.81
PTCSC3-201ENST00000556013 GMPSP49915 693 aaPredicted RBP10.02□□□□□ -0.81
PTCSC3-201ENST00000556013 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
PTCSC3-201ENST00000556013 MYD88Q99836 296 aa10.02□□□□□ -0.81
PTCSC3-201ENST00000556013 POLLQ9UGP5 575 aa10.02□□□□□ -0.81
PTCSC3-201ENST00000556013 WDR33Q9C0J8 1336 aaKnown RBP10.02□□□□□ -0.81
PTCSC3-201ENST00000556013 YDJCA8MPS7 323 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 C6orf229H3BNL8 230 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 RAD17O75943 681 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 MAP2K2P36507 400 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 MMP14P50281 582 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 NEXNQ0ZGT2 675 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 CST9Q5W186 159 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 WDR63Q8IWG1 891 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 TBC1D16Q8TBP0 767 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 AIDAQ96BJ3 306 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 STK31Q9BXU1 1019 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 TLL2Q9Y6L7 1015 aa10.01□□□□□ -0.81
PTCSC3-201ENST00000556013 PI4KAP2A4QPH2 592 aa10□□□□□ -0.81
PTCSC3-201ENST00000556013 VIL1P09327 827 aaKnown RBP10□□□□□ -0.81
PTCSC3-201ENST00000556013 HIRAP54198 1017 aaPredicted RBP10□□□□□ -0.81
PTCSC3-201ENST00000556013 GPSM2P81274 684 aa10□□□□□ -0.81
PTCSC3-201ENST00000556013 PODNQ7Z5L7 613 aa10□□□□□ -0.81
PTCSC3-201ENST00000556013 TSPYL6Q8N831 410 aa10□□□□□ -0.81
PTCSC3-201ENST00000556013 PI4KAP1Q8N8J0 262 aa10□□□□□ -0.81
PTCSC3-201ENST00000556013 CDC5LQ99459 802 aaKnown RBP10□□□□□ -0.81
PTCSC3-201ENST00000556013 ABT1Q9ULW3 272 aaKnown RBP10□□□□□ -0.81
PTCSC3-201ENST00000556013 MAP3K2Q9Y2U5 619 aa10□□□□□ -0.81
PTCSC3-201ENST00000556013 H7C1W4 665 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 PSMD14O00487 310 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 FOXN1O15353 648 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 ANP32CO43423 234 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 ATP2B4P23634 1241 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 TWISTNBQ3B726 338 aaPredicted RBP9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 RTL5Q5HYW3 569 aaPredicted RBP9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 SAPCD2Q86UD0 394 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 SLC51AQ86UW1 340 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 ANKRD18AQ8IVF6 992 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 TTLL11Q8NHH1 800 aa9.99□□□□□ -0.81
PTCSC3-201ENST00000556013 GPR101Q96P66 508 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms