RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 LINS1Q8NG48 757 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 ISCA1Q9BUE6 129 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 UTP14AQ9BVJ6 771 aaKnown RBP9.57□□□□□ -0.88
PCNX4-211ENST00000555929 MTFR1LQ9H019 292 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
PCNX4-211ENST00000555929 COG6Q9Y2V7 657 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 ALDH1L1O75891 902 aa9.56□□□□□ -0.88
PCNX4-211ENST00000555929 MKRN3Q13064 507 aaKnown RBP9.56□□□□□ -0.88
PCNX4-211ENST00000555929 GCKRQ14397 625 aa9.56□□□□□ -0.88
PCNX4-211ENST00000555929 LCE2DQ5TA82 110 aaPredicted RBP9.56□□□□□ -0.88
PCNX4-211ENST00000555929 TPTE2Q6XPS3 522 aa9.56□□□□□ -0.88
PCNX4-211ENST00000555929 NUTM1Q86Y26 1132 aa9.56□□□□□ -0.88
PCNX4-211ENST00000555929 CCDC191Q8NCU4 936 aa9.56□□□□□ -0.88
PCNX4-211ENST00000555929 FAM89AQ96GI7 184 aa9.56□□□□□ -0.88
PCNX4-211ENST00000555929 UBN2Q6ZU65 1347 aa9.56□□□□□ -0.88
PCNX4-211ENST00000555929 POLRMTO00411 1230 aaKnown RBP9.55□□□□□ -0.88
PCNX4-211ENST00000555929 ST5P78524 1137 aa9.55□□□□□ -0.88
PCNX4-211ENST00000555929 DDR1Q08345 913 aa9.55□□□□□ -0.88
PCNX4-211ENST00000555929 INTS3Q68E01 1043 aaKnown RBP9.55□□□□□ -0.88
PCNX4-211ENST00000555929 UBE3BQ7Z3V4 1068 aa9.55□□□□□ -0.88
PCNX4-211ENST00000555929 SYNE4Q8N205 404 aa9.55□□□□□ -0.88
PCNX4-211ENST00000555929 CNBD1Q8NA66 436 aa9.55□□□□□ -0.88
PCNX4-211ENST00000555929 NYXQ9GZU5 481 aa9.55□□□□□ -0.88
PCNX4-211ENST00000555929 SPON1Q9HCB6 807 aa9.55□□□□□ -0.88
PCNX4-211ENST00000555929 CIZ1Q9ULV3 898 aaPredicted RBP9.55□□□□□ -0.88
PCNX4-211ENST00000555929 ABCC4O15439 1325 aa9.55□□□□□ -0.88
PCNX4-211ENST00000555929 CARMIL3Q8ND23 1372 aa9.54□□□□□ -0.88
PCNX4-211ENST00000555929 UBR3Q6ZT12 1888 aa9.54□□□□□ -0.88
PCNX4-211ENST00000555929 RGL2O15211 777 aa9.54□□□□□ -0.88
PCNX4-211ENST00000555929 HCLS1P14317 486 aaPredicted RBP9.54□□□□□ -0.88
PCNX4-211ENST00000555929 TRIM28Q13263 835 aaKnown RBP9.54□□□□□ -0.88
PCNX4-211ENST00000555929 PDE3AQ14432 1141 aa9.54□□□□□ -0.88
PCNX4-211ENST00000555929 ERFEQ4G0M1 354 aa9.54□□□□□ -0.88
PCNX4-211ENST00000555929 GRM8O00222 908 aa9.53□□□□□ -0.88
PCNX4-211ENST00000555929 IRS4O14654 1257 aaPredicted RBP9.53□□□□□ -0.88
PCNX4-211ENST00000555929 NTSR2O95665 410 aa9.53□□□□□ -0.88
PCNX4-211ENST00000555929 PCCAP05165 728 aaPredicted RBP9.53□□□□□ -0.88
PCNX4-211ENST00000555929 NEFLP07196 543 aa9.53□□□□□ -0.88
PCNX4-211ENST00000555929 NBPF7P0C2Y1 421 aaPredicted RBP9.53□□□□□ -0.88
PCNX4-211ENST00000555929 UBTFL1P0CB47 393 aaPredicted RBP9.53□□□□□ -0.88
PCNX4-211ENST00000555929 PSEN1P49768 467 aa9.53□□□□□ -0.88
PCNX4-211ENST00000555929 MVPQ14764 893 aaKnown RBP9.53□□□□□ -0.88
PCNX4-211ENST00000555929 PRR5LQ6MZQ0 368 aa9.53□□□□□ -0.88
PCNX4-211ENST00000555929 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
PCNX4-211ENST00000555929 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
PCNX4-211ENST00000555929 CRBNQ96SW2 442 aa9.53□□□□□ -0.88
PCNX4-211ENST00000555929 USP44Q9H0E7 712 aa9.53□□□□□ -0.88
PCNX4-211ENST00000555929 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.53□□□□□ -0.88
PCNX4-211ENST00000555929 ATP10DQ9P241 1426 aa9.53□□□□□ -0.88
PCNX4-211ENST00000555929 SH3TC1Q8TE82 1336 aa9.53□□□□□ -0.88
PCNX4-211ENST00000555929 H7C1W4 665 aa9.52□□□□□ -0.89
PCNX4-211ENST00000555929 GNAI3P08754 354 aa9.52□□□□□ -0.89
PCNX4-211ENST00000555929 IFNLR1Q8IU57 520 aaPredicted RBP9.52□□□□□ -0.89
PCNX4-211ENST00000555929 MEIS3Q99687 375 aa9.52□□□□□ -0.89
PCNX4-211ENST00000555929 C1orf115Q9H7X2 142 aa9.52□□□□□ -0.89
PCNX4-211ENST00000555929 DDX19BQ9UMR2 479 aa9.52□□□□□ -0.89
PCNX4-211ENST00000555929 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
PCNX4-211ENST00000555929 RNF123Q5XPI4 1314 aa9.52□□□□□ -0.89
PCNX4-211ENST00000555929 HSP90B1P14625 803 aaKnown RBP9.51□□□□□ -0.89
PCNX4-211ENST00000555929 EXOC6Q8TAG9 804 aa9.51□□□□□ -0.89
PCNX4-211ENST00000555929 SUCLG2Q96I99 432 aa9.51□□□□□ -0.89
PCNX4-211ENST00000555929 NLRP3Q96P20 1036 aa9.51□□□□□ -0.89
PCNX4-211ENST00000555929 CHMP4BQ9H444 224 aaKnown RBP9.51□□□□□ -0.89
PCNX4-211ENST00000555929 LRRFIP2Q9Y608 721 aaKnown RBP9.51□□□□□ -0.89
PCNX4-211ENST00000555929 TUBGCP6Q96RT7 1819 aa9.5□□□□□ -0.89
PCNX4-211ENST00000555929 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
PCNX4-211ENST00000555929 GNAI2P04899 355 aa9.5□□□□□ -0.89
PCNX4-211ENST00000555929 PTGER2P43116 358 aa9.5□□□□□ -0.89
PCNX4-211ENST00000555929 PDAP1Q13442 181 aaKnown RBP9.5□□□□□ -0.89
PCNX4-211ENST00000555929 HDAC5Q9UQL6 1122 aa9.5□□□□□ -0.89
PCNX4-211ENST00000555929 C4AP0C0L4 1744 aa9.5□□□□□ -0.89
PCNX4-211ENST00000555929 PXDNLA1KZ92 1463 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 SNPHO15079 494 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 PDE8AO60658 829 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 PDE6BP35913 854 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 CASP7P55210 303 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 EPHA10Q5JZY3 1008 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 LMBR1LQ6UX01 489 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 C3orf67Q6ZVT6 689 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 C2CD5Q86YS7 1000 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 ZNF622Q969S3 477 aaKnown RBP eCLIP9.49□□□□□ -0.89
PCNX4-211ENST00000555929 L3MBTL3Q96JM7 780 aaPredicted RBP9.49□□□□□ -0.89
PCNX4-211ENST00000555929 BRIP1Q9BX63 1249 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 BICC1Q9H694 974 aaKnown RBP9.49□□□□□ -0.89
PCNX4-211ENST00000555929 WWC3Q9ULE0 1092 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 CDHR2Q9BYE9 1310 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 ABCC12Q96J65 1359 aa9.49□□□□□ -0.89
PCNX4-211ENST00000555929 SCN7AQ01118 1682 aa9.48□□□□□ -0.89
PCNX4-211ENST00000555929 A0A0G2JLW4 131 aa9.48□□□□□ -0.89
PCNX4-211ENST00000555929 H0YIN7 160 aa9.48□□□□□ -0.89
PCNX4-211ENST00000555929 CHRNA5P30532 468 aa9.48□□□□□ -0.89
PCNX4-211ENST00000555929 SLC10A5Q5PT55 438 aa9.48□□□□□ -0.89
PCNX4-211ENST00000555929 RPGRQ92834 1020 aaKnown RBP9.48□□□□□ -0.89
PCNX4-211ENST00000555929 BCORQ6W2J9 1755 aa9.47□□□□□ -0.89
PCNX4-211ENST00000555929 ARFGEF2Q9Y6D5 1785 aa9.47□□□□□ -0.89
PCNX4-211ENST00000555929 CTSWP56202 376 aa9.47□□□□□ -0.89
PCNX4-211ENST00000555929 FOXO4P98177 505 aa9.47□□□□□ -0.89
PCNX4-211ENST00000555929 CCDC152Q4G0S7 254 aa9.47□□□□□ -0.89
PCNX4-211ENST00000555929 TAF7LQ5H9L4 462 aa9.47□□□□□ -0.89
PCNX4-211ENST00000555929 DDX46Q7L014 1031 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms