RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 IRX6P78412 446 aaPredicted RBP8.83□□□□□ -1
SLIRP-204ENST00000555890 SLFN5Q08AF3 891 aa8.83□□□□□ -1
SLIRP-204ENST00000555890 CIAPIN1Q6FI81 312 aa8.83□□□□□ -1
SLIRP-204ENST00000555890 GPCPD1Q9NPB8 672 aa8.83□□□□□ -1
SLIRP-204ENST00000555890 HCN4Q9Y3Q4 1203 aa8.83□□□□□ -1
SLIRP-204ENST00000555890 MUC3AQ02505 3323 aa8.83□□□□□ -1
SLIRP-204ENST00000555890 LY75O60449 1722 aa8.83□□□□□ -1
SLIRP-204ENST00000555890 BRCA2P51587 3418 aa8.82□□□□□ -1
SLIRP-204ENST00000555890 SOX1O00570 391 aaPredicted RBP8.82□□□□□ -1
SLIRP-204ENST00000555890 CCDC27Q2M243 656 aa8.82□□□□□ -1
SLIRP-204ENST00000555890 WDR63Q8IWG1 891 aa8.82□□□□□ -1
SLIRP-204ENST00000555890 WWC1Q8IX03 1113 aa8.82□□□□□ -1
SLIRP-204ENST00000555890 DACH1Q9UI36 760 aa8.82□□□□□ -1
SLIRP-204ENST00000555890 PIK3C2AO00443 1686 aa8.81□□□□□ -1
SLIRP-204ENST00000555890 RAD21O60216 631 aa8.81□□□□□ -1
SLIRP-204ENST00000555890 RRP1P56182 461 aaKnown RBP8.81□□□□□ -1
SLIRP-204ENST00000555890 KCTD2Q14681 263 aa8.81□□□□□ -1
SLIRP-204ENST00000555890 DALRD3Q5D0E6 543 aaKnown RBP8.81□□□□□ -1
SLIRP-204ENST00000555890 AKAP4Q5JQC9 854 aa8.81□□□□□ -1
SLIRP-204ENST00000555890 DUSP27Q5VZP5 1158 aa8.81□□□□□ -1
SLIRP-204ENST00000555890 TRMT2AQ8IZ69 625 aaKnown RBP8.81□□□□□ -1
SLIRP-204ENST00000555890 PIM2Q9P1W9 311 aa8.81□□□□□ -1
SLIRP-204ENST00000555890 KDM6AO15550 1401 aaPredicted RBP8.8□□□□□ -1
SLIRP-204ENST00000555890 A0A1W2PPC1 479 aa8.8□□□□□ -1
SLIRP-204ENST00000555890 SSTR3P32745 418 aaPredicted RBP8.8□□□□□ -1
SLIRP-204ENST00000555890 AMIGO3Q86WK7 504 aa8.8□□□□□ -1
SLIRP-204ENST00000555890 CNTROBQ8N137 903 aa8.8□□□□□ -1
SLIRP-204ENST00000555890 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.8□□□□□ -1
SLIRP-204ENST00000555890 EMILIN1Q9Y6C2 1016 aa8.8□□□□□ -1
SLIRP-204ENST00000555890 USP31Q70CQ4 1352 aa8.8□□□□□ -1
SLIRP-204ENST00000555890 IQCA1LA6NCM1 817 aa8.79□□□□□ -1
SLIRP-204ENST00000555890 MDM2Q00987 491 aaPredicted RBP8.79□□□□□ -1
SLIRP-204ENST00000555890 PLEKHF1Q96S99 279 aa8.79□□□□□ -1
SLIRP-204ENST00000555890 MYH16Q9H6N6 1097 aa8.79□□□□□ -1
SLIRP-204ENST00000555890 MTMR10Q9NXD2 777 aa8.79□□□□□ -1
SLIRP-204ENST00000555890 SAGE1Q9NXZ1 904 aa8.79□□□□□ -1
SLIRP-204ENST00000555890 SERPINA10Q9UK55 444 aa8.79□□□□□ -1
SLIRP-204ENST00000555890 RRP7AQ9Y3A4 280 aaKnown RBP8.79□□□□□ -1
SLIRP-204ENST00000555890 NFAT5O94916 1531 aa8.79□□□□□ -1
SLIRP-204ENST00000555890 ERBB3P21860 1342 aa8.79□□□□□ -1
SLIRP-204ENST00000555890 USP54Q70EL1 1684 aa8.78□□□□□ -1
SLIRP-204ENST00000555890 CSB-PGBD3P0DP91 1061 aa8.78□□□□□ -1
SLIRP-204ENST00000555890 FBLN1P23142 703 aa8.78□□□□□ -1
SLIRP-204ENST00000555890 IL13P35225 146 aa8.78□□□□□ -1
SLIRP-204ENST00000555890 TMPOP42166 694 aaKnown RBP8.78□□□□□ -1
SLIRP-204ENST00000555890 RASSF7Q02833 373 aa8.78□□□□□ -1
SLIRP-204ENST00000555890 RRS1Q15050 365 aaKnown RBP8.78□□□□□ -1
SLIRP-204ENST00000555890 CCDC97Q96F63 343 aaPredicted RBP8.78□□□□□ -1
SLIRP-204ENST00000555890 EPAS1Q99814 870 aa8.78□□□□□ -1
SLIRP-204ENST00000555890 NPDC1Q9NQX5 325 aaPredicted RBP8.78□□□□□ -1
SLIRP-204ENST00000555890 DDX21Q9NR30 783 aaKnown RBP eCLIP8.78□□□□□ -1
SLIRP-204ENST00000555890 KIAA1551Q9HCM1 1747 aa8.77□□□□□ -1
SLIRP-204ENST00000555890 IL2RBP14784 551 aa8.77□□□□□ -1.01
SLIRP-204ENST00000555890 MRE11P49959 708 aa8.77□□□□□ -1.01
SLIRP-204ENST00000555890 TMEM92Q6UXU6 159 aa8.77□□□□□ -1.01
SLIRP-204ENST00000555890 SMIM5Q71RC9 77 aa8.77□□□□□ -1.01
SLIRP-204ENST00000555890 ZNF710Q8N1W2 664 aa8.77□□□□□ -1.01
SLIRP-204ENST00000555890 PTCD2Q8WV60 388 aaKnown RBP8.77□□□□□ -1.01
SLIRP-204ENST00000555890 PRO3102Q9H379 93 aa8.77□□□□□ -1.01
SLIRP-204ENST00000555890 IL16Q14005 1332 aa8.77□□□□□ -1.01
SLIRP-204ENST00000555890 KIF24Q5T7B8 1368 aa8.76□□□□□ -1.01
SLIRP-204ENST00000555890 KCNA3P22001 575 aa8.76□□□□□ -1.01
SLIRP-204ENST00000555890 HMGB2P26583 209 aaKnown RBP8.76□□□□□ -1.01
SLIRP-204ENST00000555890 PRKAR2BP31323 418 aa8.76□□□□□ -1.01
SLIRP-204ENST00000555890 RIPK4P57078 832 aa8.76□□□□□ -1.01
SLIRP-204ENST00000555890 CALD1Q05682 793 aaKnown RBP8.76□□□□□ -1.01
SLIRP-204ENST00000555890 MAP3K11Q16584 847 aa8.76□□□□□ -1.01
SLIRP-204ENST00000555890 INTS3Q68E01 1043 aaKnown RBP8.76□□□□□ -1.01
SLIRP-204ENST00000555890 Q7L0L9 218 aa8.76□□□□□ -1.01
SLIRP-204ENST00000555890 TAF1DQ9H5J8 278 aaPredicted RBP8.76□□□□□ -1.01
SLIRP-204ENST00000555890 CCNL1Q9UK58 526 aaPredicted RBP8.76□□□□□ -1.01
SLIRP-204ENST00000555890 TLL2Q9Y6L7 1015 aa8.76□□□□□ -1.01
SLIRP-204ENST00000555890 SPDYE5A6NIY4 337 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 MAP3K7O43318 606 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 PHF14O94880 888 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 HMOX1P09601 288 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 AMPHP49418 695 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 LMOD3Q0VAK6 560 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 NFE2L2Q16236 605 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 EAPPQ56P03 285 aaPredicted RBP8.75□□□□□ -1.01
SLIRP-204ENST00000555890 FBXO46Q6PJ61 603 aaPredicted RBP8.75□□□□□ -1.01
SLIRP-204ENST00000555890 KCNH5Q8NCM2 988 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 NECTIN2Q92692 538 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 CCDC136Q96JN2 1154 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 TRAIPQ9BWF2 469 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 CDHR5Q9HBB8 845 aa8.75□□□□□ -1.01
SLIRP-204ENST00000555890 FLT4P35916 1363 aa8.74□□□□□ -1.01
SLIRP-204ENST00000555890 TOGARAM1Q9Y4F4 1720 aa8.74□□□□□ -1.01
SLIRP-204ENST00000555890 LAMA2P24043 3122 aaKnown RBP8.74□□□□□ -1.01
SLIRP-204ENST00000555890 CT47B1P0C2W7 299 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-204ENST00000555890 HOXB1P14653 301 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-204ENST00000555890 EIF4A2Q14240 407 aaKnown RBP8.74□□□□□ -1.01
SLIRP-204ENST00000555890 PROCA1Q8NCQ7 364 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-204ENST00000555890 DDX54Q8TDD1 881 aaKnown RBP8.74□□□□□ -1.01
SLIRP-204ENST00000555890 POM121Q96HA1 1249 aa8.74□□□□□ -1.01
SLIRP-204ENST00000555890 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
SLIRP-204ENST00000555890 FAM217BQ9NTX9 383 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-204ENST00000555890 NLRP2Q9NX02 1062 aa8.74□□□□□ -1.01
SLIRP-204ENST00000555890 TAF1LQ8IZX4 1826 aa8.74□□□□□ -1.01
SLIRP-204ENST00000555890 MAP3K19Q56UN5 1328 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms