RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 ABCC2Q92887 1545 aa8.51□□□□□ -1.05
ATXN3-233ENST00000555816 COL9A3Q14050 684 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-233ENST00000555816 PCSK7Q16549 785 aa8.51□□□□□ -1.05
ATXN3-233ENST00000555816 RTN1Q16799 776 aa8.51□□□□□ -1.05
ATXN3-233ENST00000555816 C20orf204Q6ZNR8 217 aa8.51□□□□□ -1.05
ATXN3-233ENST00000555816 SCG3Q8WXD2 468 aaKnown RBP8.51□□□□□ -1.05
ATXN3-233ENST00000555816 HSH2DQ96JZ2 352 aa8.51□□□□□ -1.05
ATXN3-233ENST00000555816 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-233ENST00000555816 BIVM-ERCC5R4GMW8 1640 aa8.51□□□□□ -1.05
ATXN3-233ENST00000555816 A6NJR5 290 aa8.5□□□□□ -1.05
ATXN3-233ENST00000555816 LILRB5O75023 590 aa8.5□□□□□ -1.05
ATXN3-233ENST00000555816 XP32Q5T750 250 aa8.5□□□□□ -1.05
ATXN3-233ENST00000555816 KIF27Q86VH2 1401 aa8.49□□□□□ -1.05
ATXN3-233ENST00000555816 ALBP02768 609 aa8.49□□□□□ -1.05
ATXN3-233ENST00000555816 IGFBP4P22692 258 aa8.49□□□□□ -1.05
ATXN3-233ENST00000555816 DOC2BQ14184 412 aa8.49□□□□□ -1.05
ATXN3-233ENST00000555816 HINFPQ9BQA5 517 aa8.49□□□□□ -1.05
ATXN3-233ENST00000555816 PPP1R12CQ9BZL4 782 aa8.49□□□□□ -1.05
ATXN3-233ENST00000555816 CARMIL1Q5VZK9 1371 aa8.48□□□□□ -1.05
ATXN3-233ENST00000555816 GLI2P10070 1586 aa8.48□□□□□ -1.05
ATXN3-233ENST00000555816 UACAQ9BZF9 1416 aa8.48□□□□□ -1.05
ATXN3-233ENST00000555816 FAM196BA6NMK8 535 aa8.48□□□□□ -1.05
ATXN3-233ENST00000555816 C9orf172C9J069 976 aa8.48□□□□□ -1.05
ATXN3-233ENST00000555816 TGFBR3LH3BV60 316 aa8.48□□□□□ -1.05
ATXN3-233ENST00000555816 NID1P14543 1247 aa8.48□□□□□ -1.05
ATXN3-233ENST00000555816 EPB42P16452 691 aa8.48□□□□□ -1.05
ATXN3-233ENST00000555816 PTK7Q13308 1070 aa8.48□□□□□ -1.05
ATXN3-233ENST00000555816 CALR3Q96L12 384 aaKnown RBP8.48□□□□□ -1.05
ATXN3-233ENST00000555816 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
ATXN3-233ENST00000555816 CCINQ13939 588 aa8.47□□□□□ -1.05
ATXN3-233ENST00000555816 KANK4Q5T7N3 995 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-233ENST00000555816 BHMTQ93088 406 aa8.47□□□□□ -1.05
ATXN3-233ENST00000555816 CLUAP1Q96AJ1 413 aa8.47□□□□□ -1.05
ATXN3-233ENST00000555816 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
ATXN3-233ENST00000555816 SEMA6BQ9H3T3 888 aa8.47□□□□□ -1.05
ATXN3-233ENST00000555816 VRTNQ9H8Y1 702 aa8.47□□□□□ -1.05
ATXN3-233ENST00000555816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.47□□□□□ -1.05
ATXN3-233ENST00000555816 TEX14Q8IWB6 1497 aa8.46□□□□□ -1.05
ATXN3-233ENST00000555816 ANKMY2Q8IV38 441 aa8.46□□□□□ -1.06
ATXN3-233ENST00000555816 UBE2OQ9C0C9 1292 aaKnown RBP8.46□□□□□ -1.06
ATXN3-233ENST00000555816 TSPOAP1O95153 1857 aa8.46□□□□□ -1.06
ATXN3-233ENST00000555816 EPRSP07814 1512 aaKnown RBP8.45□□□□□ -1.06
ATXN3-233ENST00000555816 HECW2Q9P2P5 1572 aa8.45□□□□□ -1.06
ATXN3-233ENST00000555816 NRG1Q02297 640 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-233ENST00000555816 DPYDQ12882 1025 aa8.45□□□□□ -1.06
ATXN3-233ENST00000555816 TRAPPC3LQ5T215 181 aa8.45□□□□□ -1.06
ATXN3-233ENST00000555816 RAB44Q7Z6P3 723 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-233ENST00000555816 Q8N3U1 123 aa8.45□□□□□ -1.06
ATXN3-233ENST00000555816 PNMA5Q96PV4 448 aa8.45□□□□□ -1.06
ATXN3-233ENST00000555816 DMGDHQ9UI17 866 aaKnown RBP8.45□□□□□ -1.06
ATXN3-233ENST00000555816 MAP3K6O95382 1288 aa8.44□□□□□ -1.06
ATXN3-233ENST00000555816 ELNP15502 786 aa8.44□□□□□ -1.06
ATXN3-233ENST00000555816 RAC1P63000 192 aa8.44□□□□□ -1.06
ATXN3-233ENST00000555816 NGLY1Q96IV0 654 aa8.44□□□□□ -1.06
ATXN3-233ENST00000555816 SLC6A14Q9UN76 642 aa8.44□□□□□ -1.06
ATXN3-233ENST00000555816 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-233ENST00000555816 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
ATXN3-233ENST00000555816 FOXO3O43524 673 aa8.43□□□□□ -1.06
ATXN3-233ENST00000555816 CRTC2Q53ET0 693 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-233ENST00000555816 NKAPLQ5M9Q1 402 aa8.43□□□□□ -1.06
ATXN3-233ENST00000555816 KDM5BQ9UGL1 1544 aa8.43□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L15C9J2P7 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L10C9JJH3 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L13C9JLJ4 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L12C9JPN9 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L11C9JVI0 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L21D6R901 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L18D6R9N7 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L22D6RA61 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L17D6RBQ6 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L19D6RCP7 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L20D6RJB6 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 USP17L24Q0WX57 530 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 RSPO4Q2I0M5 234 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-233ENST00000555816 C8orf86Q6ZUL3 223 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 DNAJB12Q9NXW2 375 aaKnown RBP8.42□□□□□ -1.06
ATXN3-233ENST00000555816 FRRS1LQ9P0K9 344 aa8.42□□□□□ -1.06
ATXN3-233ENST00000555816 CD109Q6YHK3 1445 aa8.41□□□□□ -1.06
ATXN3-233ENST00000555816 RGS9O75916 674 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-233ENST00000555816 ARID4AP29374 1257 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-233ENST00000555816 INPP5BP32019 993 aa8.41□□□□□ -1.06
ATXN3-233ENST00000555816 ILDR2Q71H61 639 aa8.41□□□□□ -1.06
ATXN3-233ENST00000555816 DTWD1Q8N5C7 304 aa8.41□□□□□ -1.06
ATXN3-233ENST00000555816 TTC9Q92623 222 aa8.41□□□□□ -1.06
ATXN3-233ENST00000555816 LENG1Q96BZ8 264 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-233ENST00000555816 MYO19Q96H55 970 aa8.41□□□□□ -1.06
ATXN3-233ENST00000555816 JPH1Q9HDC5 661 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-233ENST00000555816 TPSG1Q9NRR2 321 aa8.41□□□□□ -1.06
ATXN3-233ENST00000555816 A0A0A0MRY4 1105 aa8.4□□□□□ -1.06
ATXN3-233ENST00000555816 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
ATXN3-233ENST00000555816 H2AFB2P0C5Z0 115 aa8.4□□□□□ -1.06
ATXN3-233ENST00000555816 LMOD1P29536 600 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-233ENST00000555816 WEE1P30291 646 aa8.4□□□□□ -1.06
ATXN3-233ENST00000555816 ADGRE1Q14246 886 aa8.4□□□□□ -1.06
ATXN3-233ENST00000555816 GRIK4Q16099 956 aa8.4□□□□□ -1.06
ATXN3-233ENST00000555816 C11orf91Q3C1V1 193 aa8.4□□□□□ -1.06
ATXN3-233ENST00000555816 IGFLR1Q9H665 355 aa8.4□□□□□ -1.06
ATXN3-233ENST00000555816 BCS1LQ9Y276 419 aa8.4□□□□□ -1.06
ATXN3-233ENST00000555816 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.07
ATXN3-233ENST00000555816 FAM229AH3BQW9 127 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms