RNA–Protein interactions for RNA: ENST00000555704.5

KLHDC1-204, Transcript of kelch domain containing 1, humanhuman

TSL 1 (best)

Gene KLHDC1, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1-204ENST00000555704 GRAPQ13588 217 aa32.07■■■□□ 2.72
KLHDC1-204ENST00000555704 GRAPLQ8TC17 118 aaPredicted RBP32.07■■■□□ 2.72
KLHDC1-204ENST00000555704 FER1L6Q2WGJ9 1857 aa32.06■■■□□ 2.72
KLHDC1-204ENST00000555704 CTSWP56202 376 aa32.06■■■□□ 2.72
KLHDC1-204ENST00000555704 PLA2G12BQ9BX93 195 aa32.05■■■□□ 2.72
KLHDC1-204ENST00000555704 GRM8O00222 908 aa32.04■■■□□ 2.72
KLHDC1-204ENST00000555704 CELF1Q92879 486 aaKnown RBP32.04■■■□□ 2.72
KLHDC1-204ENST00000555704 CCDC85AQ96PX6 553 aaPredicted RBP32.04■■■□□ 2.72
KLHDC1-204ENST00000555704 CCDC152Q4G0S7 254 aa32.03■■■□□ 2.72
KLHDC1-204ENST00000555704 API5Q9BZZ5 524 aaKnown RBP32.03■■■□□ 2.72
KLHDC1-204ENST00000555704 LTBP3Q9NS15 1303 aa32.03■■■□□ 2.72
KLHDC1-204ENST00000555704 TAF1P21675 1872 aa32.03■■■□□ 2.72
KLHDC1-204ENST00000555704 C9orf131Q5VYM1 1079 aa32.02■■■□□ 2.72
KLHDC1-204ENST00000555704 TTLL11Q8NHH1 800 aa32.02■■■□□ 2.72
KLHDC1-204ENST00000555704 TAOK3Q9H2K8 898 aa32.02■■■□□ 2.72
KLHDC1-204ENST00000555704 SEC31BQ9NQW1 1179 aa32.02■■■□□ 2.72
KLHDC1-204ENST00000555704 BBOX1O75936 387 aa32.01■■■□□ 2.72
KLHDC1-204ENST00000555704 ARHGAP45Q92619 1136 aa32.01■■■□□ 2.72
KLHDC1-204ENST00000555704 ATP6V0A2Q9Y487 856 aa32.01■■■□□ 2.72
KLHDC1-204ENST00000555704 C9orf78Q9NZ63 289 aaPredicted RBP32■■■□□ 2.71
KLHDC1-204ENST00000555704 RNF181Q9P0P0 153 aa32■■■□□ 2.71
KLHDC1-204ENST00000555704 CC2D2BQ6DHV5 1058 aa32■■■□□ 2.71
KLHDC1-204ENST00000555704 RTKN2Q8IZC4 609 aa32■■■□□ 2.71
KLHDC1-204ENST00000555704 SBF1O95248 1867 aa31.99■■■□□ 2.71
KLHDC1-204ENST00000555704 MYH3P11055 1940 aa31.99■■■□□ 2.71
KLHDC1-204ENST00000555704 LMNB1P20700 586 aa31.99■■■□□ 2.71
KLHDC1-204ENST00000555704 GREM2Q9H772 168 aa31.99■■■□□ 2.71
KLHDC1-204ENST00000555704 UTYO14607 1347 aa31.99■■■□□ 2.71
KLHDC1-204ENST00000555704 RTL9Q8NET4 1388 aa31.98■■■□□ 2.71
KLHDC1-204ENST00000555704 NBPF7P0C2Y1 421 aaPredicted RBP31.98■■■□□ 2.71
KLHDC1-204ENST00000555704 FKBP4Q02790 459 aaKnown RBP eCLIP31.98■■■□□ 2.71
KLHDC1-204ENST00000555704 FRAT1Q92837 279 aaPredicted RBP31.98■■■□□ 2.71
KLHDC1-204ENST00000555704 YTHDC1Q96MU7 727 aaKnown RBP31.98■■■□□ 2.71
KLHDC1-204ENST00000555704 LRRC37AA6NMS7 1700 aa31.98■■■□□ 2.71
KLHDC1-204ENST00000555704 TRIM27P14373 513 aa31.97■■■□□ 2.71
KLHDC1-204ENST00000555704 TNNQ9UQP3 1299 aa31.97■■■□□ 2.71
KLHDC1-204ENST00000555704 FOXO4P98177 505 aa31.96■■■□□ 2.71
KLHDC1-204ENST00000555704 SP8Q8IXZ3 490 aa31.96■■■□□ 2.71
KLHDC1-204ENST00000555704 CSF1RP07333 972 aa31.95■■■□□ 2.71
KLHDC1-204ENST00000555704 CCT4P50991 539 aaKnown RBP31.95■■■□□ 2.71
KLHDC1-204ENST00000555704 EPHA10Q5JZY3 1008 aa31.95■■■□□ 2.71
KLHDC1-204ENST00000555704 ATF7IPQ6VMQ6 1270 aa31.95■■■□□ 2.71
KLHDC1-204ENST00000555704 TMC4Q7Z404 712 aa31.95■■■□□ 2.71
KLHDC1-204ENST00000555704 IPO8O15397 1037 aaKnown RBP31.94■■■□□ 2.7
KLHDC1-204ENST00000555704 RPS8P62241 208 aaKnown RBP31.94■■■□□ 2.7
KLHDC1-204ENST00000555704 FAM161AQ3B820 660 aa31.94■■■□□ 2.7
KLHDC1-204ENST00000555704 SUCLG2Q96I99 432 aa31.94■■■□□ 2.7
KLHDC1-204ENST00000555704 PSMD1Q99460 953 aa31.94■■■□□ 2.7
KLHDC1-204ENST00000555704 KAZALD1Q96I82 304 aa31.93■■■□□ 2.7
KLHDC1-204ENST00000555704 USP44Q9H0E7 712 aa31.93■■■□□ 2.7
KLHDC1-204ENST00000555704 GRIPAP1Q4V328 841 aa31.92■■■□□ 2.7
KLHDC1-204ENST00000555704 ZNF784Q8NCA9 323 aaPredicted RBP31.92■■■□□ 2.7
KLHDC1-204ENST00000555704 ZNF277Q9NRM2 450 aaPredicted RBP31.92■■■□□ 2.7
KLHDC1-204ENST00000555704 TMX4Q9H1E5 349 aaPredicted RBP31.92■■■□□ 2.7
KLHDC1-204ENST00000555704 TIAM2Q8IVF5 1701 aa31.91■■■□□ 2.7
KLHDC1-204ENST00000555704 ZKSCAN2Q63HK3 967 aa31.91■■■□□ 2.7
KLHDC1-204ENST00000555704 CDC5LQ99459 802 aaKnown RBP31.91■■■□□ 2.7
KLHDC1-204ENST00000555704 DUOX1Q9NRD9 1551 aa31.91■■■□□ 2.7
KLHDC1-204ENST00000555704 ITGA6P23229 1130 aa31.9■■■□□ 2.7
KLHDC1-204ENST00000555704 INTS3Q68E01 1043 aaKnown RBP31.9■■■□□ 2.7
KLHDC1-204ENST00000555704 ANKRD18AQ8IVF6 992 aa31.9■■■□□ 2.7
KLHDC1-204ENST00000555704 LMBR1LQ6UX01 489 aa31.89■■■□□ 2.7
KLHDC1-204ENST00000555704 CLUAP1Q96AJ1 413 aa31.89■■■□□ 2.7
KLHDC1-204ENST00000555704 MPNDQ8N594 471 aa31.88■■■□□ 2.69
KLHDC1-204ENST00000555704 CCDC88AQ3V6T2 1871 aa31.88■■■□□ 2.69
KLHDC1-204ENST00000555704 DPP8Q6V1X1 898 aaPredicted RBP31.87■■■□□ 2.69
KLHDC1-204ENST00000555704 RTFDC1Q9BY42 306 aaPredicted RBP31.87■■■□□ 2.69
KLHDC1-204ENST00000555704 ZC3H4Q9UPT8 1303 aaKnown RBP31.86■■■□□ 2.69
KLHDC1-204ENST00000555704 LTBP1Q14766 1721 aa31.86■■■□□ 2.69
KLHDC1-204ENST00000555704 IARSP41252 1262 aaKnown RBP31.86■■■□□ 2.69
KLHDC1-204ENST00000555704 BICC1Q9H694 974 aaKnown RBP31.86■■■□□ 2.69
KLHDC1-204ENST00000555704 COL4A5P29400 1685 aa31.85■■■□□ 2.69
KLHDC1-204ENST00000555704 CHMP3Q9Y3E7 222 aa31.85■■■□□ 2.69
KLHDC1-204ENST00000555704 GPSM2P81274 684 aa31.84■■■□□ 2.69
KLHDC1-204ENST00000555704 RCAN3Q9UKA8 241 aa31.84■■■□□ 2.69
KLHDC1-204ENST00000555704 DICER1Q9UPY3 1922 aaKnown RBP31.84■■■□□ 2.69
KLHDC1-204ENST00000555704 RABL6Q3YEC7 729 aaPredicted RBP31.83■■■□□ 2.69
KLHDC1-204ENST00000555704 ANKRD44Q8N8A2 993 aa31.83■■■□□ 2.69
KLHDC1-204ENST00000555704 BSDC1Q9NW68 430 aaPredicted RBP31.83■■■□□ 2.69
KLHDC1-204ENST00000555704 NSFL1CQ9UNZ2 370 aaKnown RBP31.83■■■□□ 2.69
KLHDC1-204ENST00000555704 SPEF2Q9C093 1822 aa31.83■■■□□ 2.69
KLHDC1-204ENST00000555704 ANKRD18BA2A2Z9 1011 aa31.83■■■□□ 2.69
KLHDC1-204ENST00000555704 IFIT5Q13325 482 aaKnown RBP31.83■■■□□ 2.69
KLHDC1-204ENST00000555704 ZNF526Q8TF50 670 aaPredicted RBP31.83■■■□□ 2.69
KLHDC1-204ENST00000555704 MEIS3Q99687 375 aa31.83■■■□□ 2.69
KLHDC1-204ENST00000555704 IGHMBP2P38935 993 aaKnown RBP31.82■■■□□ 2.68
KLHDC1-204ENST00000555704 TMEM57Q8N5G2 664 aa31.82■■■□□ 2.68
KLHDC1-204ENST00000555704 UBTFL1P0CB47 393 aaPredicted RBP31.81■■■□□ 2.68
KLHDC1-204ENST00000555704 SUPT20HQ8NEM7 779 aa31.81■■■□□ 2.68
KLHDC1-204ENST00000555704 PODXL2Q9NZ53 605 aa31.8■■■□□ 2.68
KLHDC1-204ENST00000555704 RLBP1P12271 317 aa31.79■■■□□ 2.68
KLHDC1-204ENST00000555704 AOC3Q16853 763 aa31.79■■■□□ 2.68
KLHDC1-204ENST00000555704 POLLQ9UGP5 575 aa31.79■■■□□ 2.68
KLHDC1-204ENST00000555704 PPIP5K2O43314 1243 aa31.78■■■□□ 2.68
KLHDC1-204ENST00000555704 CCDC57Q2TAC2 916 aa31.78■■■□□ 2.68
KLHDC1-204ENST00000555704 FTSJ3Q8IY81 847 aaKnown RBP31.78■■■□□ 2.68
KLHDC1-204ENST00000555704 DZIP1LQ8IYY4 767 aaKnown RBP31.78■■■□□ 2.68
KLHDC1-204ENST00000555704 LARGE2Q8N3Y3 721 aa31.78■■■□□ 2.68
KLHDC1-204ENST00000555704 MINPP1Q9UNW1 487 aa31.78■■■□□ 2.68
KLHDC1-204ENST00000555704 TBC1D16Q8TBP0 767 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms