RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 FNBP4Q8N3X1 1017 aaPredicted RBP9.86□□□□□ -0.83
LINC00641-202ENST00000555688 KCTD12Q96CX2 325 aaKnown RBP9.86□□□□□ -0.83
LINC00641-202ENST00000555688 RWDD1Q9H446 243 aaPredicted RBP9.86□□□□□ -0.83
LINC00641-202ENST00000555688 LGR6Q9HBX8 967 aa9.86□□□□□ -0.83
LINC00641-202ENST00000555688 SLAIN2Q9P270 581 aa9.86□□□□□ -0.83
LINC00641-202ENST00000555688 RGS12O14924 1447 aa9.86□□□□□ -0.83
LINC00641-202ENST00000555688 DESI1Q6ICB0 168 aa9.86□□□□□ -0.83
LINC00641-202ENST00000555688 API5Q9BZZ5 524 aaKnown RBP9.86□□□□□ -0.83
LINC00641-202ENST00000555688 SOS2Q07890 1332 aaPredicted RBP9.85□□□□□ -0.83
LINC00641-202ENST00000555688 AMOTQ4VCS5 1084 aa9.85□□□□□ -0.83
LINC00641-202ENST00000555688 PLEKHO1Q53GL0 409 aaPredicted RBP9.85□□□□□ -0.83
LINC00641-202ENST00000555688 AKAP4Q5JQC9 854 aa9.85□□□□□ -0.83
LINC00641-202ENST00000555688 BLOC1S3Q6QNY0 202 aa9.85□□□□□ -0.83
LINC00641-202ENST00000555688 RNF19BQ6ZMZ0 732 aa9.85□□□□□ -0.83
LINC00641-202ENST00000555688 TSC1Q92574 1164 aa9.85□□□□□ -0.83
LINC00641-202ENST00000555688 RGS3P49796 1198 aa9.84□□□□□ -0.83
LINC00641-202ENST00000555688 THAP11Q96EK4 314 aa9.84□□□□□ -0.83
LINC00641-202ENST00000555688 GJD4Q96KN9 370 aaPredicted RBP9.84□□□□□ -0.83
LINC00641-202ENST00000555688 USB1Q9BQ65 265 aaKnown RBP9.84□□□□□ -0.83
LINC00641-202ENST00000555688 PDZRN3Q9UPQ7 1066 aa9.84□□□□□ -0.83
LINC00641-202ENST00000555688 FMNL1O95466 1100 aaPredicted RBP9.83□□□□□ -0.84
LINC00641-202ENST00000555688 INTS3Q68E01 1043 aaKnown RBP9.83□□□□□ -0.84
LINC00641-202ENST00000555688 ZNF530Q6P9A1 599 aaPredicted RBP9.83□□□□□ -0.84
LINC00641-202ENST00000555688 CPDO75976 1380 aa9.83□□□□□ -0.84
LINC00641-202ENST00000555688 PTPRCP08575 1304 aa9.83□□□□□ -0.84
LINC00641-202ENST00000555688 C8orf34Q49A92 452 aa9.83□□□□□ -0.84
LINC00641-202ENST00000555688 G2E3Q7L622 706 aa9.83□□□□□ -0.84
LINC00641-202ENST00000555688 SMC5Q8IY18 1101 aa9.83□□□□□ -0.84
LINC00641-202ENST00000555688 GDPD2Q9HCC8 539 aa9.83□□□□□ -0.84
LINC00641-202ENST00000555688 SOS1Q07889 1333 aaPredicted RBP9.82□□□□□ -0.84
LINC00641-202ENST00000555688 FAM208AQ9UK61 1670 aaKnown RBP9.82□□□□□ -0.84
LINC00641-202ENST00000555688 RNMTO43148 476 aaKnown RBP9.82□□□□□ -0.84
LINC00641-202ENST00000555688 CHRNA2Q15822 529 aa9.82□□□□□ -0.84
LINC00641-202ENST00000555688 MPRIPQ6WCQ1 1025 aa9.82□□□□□ -0.84
LINC00641-202ENST00000555688 SIRT2Q8IXJ6 389 aa9.82□□□□□ -0.84
LINC00641-202ENST00000555688 LRRN4Q8WUT4 740 aa9.82□□□□□ -0.84
LINC00641-202ENST00000555688 HMX1Q9NP08 348 aaPredicted RBP9.82□□□□□ -0.84
LINC00641-202ENST00000555688 ABCC6O95255 1503 aa9.82□□□□□ -0.84
LINC00641-202ENST00000555688 EIF4A1P60842 406 aaKnown RBP9.81□□□□□ -0.84
LINC00641-202ENST00000555688 CHMP4BQ9H444 224 aaKnown RBP9.81□□□□□ -0.84
LINC00641-202ENST00000555688 NDUFB9Q9Y6M9 179 aa9.81□□□□□ -0.84
LINC00641-202ENST00000555688 VIRMAQ69YN4 1812 aaKnown RBP9.81□□□□□ -0.84
LINC00641-202ENST00000555688 ADAMTS7Q9UKP4 1686 aa9.81□□□□□ -0.84
LINC00641-202ENST00000555688 KDM3BQ7LBC6 1761 aa9.81□□□□□ -0.84
LINC00641-202ENST00000555688 CACNA1FO60840 1977 aa9.81□□□□□ -0.84
LINC00641-202ENST00000555688 KCNQ3O43525 872 aa9.8□□□□□ -0.84
LINC00641-202ENST00000555688 TRIM34Q9BYJ4 488 aa9.8□□□□□ -0.84
LINC00641-202ENST00000555688 TBC1D2BQ9UPU7 963 aa9.8□□□□□ -0.84
LINC00641-202ENST00000555688 OVOS2A0A0G2JMS6 1433 aa9.8□□□□□ -0.84
LINC00641-202ENST00000555688 CCDC30Q5VVM6 783 aa9.8□□□□□ -0.84
LINC00641-202ENST00000555688 C1orf115Q9H7X2 142 aa9.8□□□□□ -0.84
LINC00641-202ENST00000555688 NLRP2Q9NX02 1062 aa9.8□□□□□ -0.84
LINC00641-202ENST00000555688 C1orf141Q5JVX7 400 aa9.79□□□□□ -0.84
LINC00641-202ENST00000555688 LYPD8Q6UX82 237 aa9.79□□□□□ -0.84
LINC00641-202ENST00000555688 MEGF6O75095 1541 aa9.79□□□□□ -0.84
LINC00641-202ENST00000555688 SIPA1L3O60292 1781 aaPredicted RBP9.79□□□□□ -0.84
LINC00641-202ENST00000555688 HEG1Q9ULI3 1381 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 NHSL1Q5SYE7 1610 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 BTBD11A6QL63 1104 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 PLEKHG2Q9H7P9 1386 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 F6X3S4 739 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 HOXB7P09629 217 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 ABL2P42684 1182 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 COPS2P61201 443 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 NUCB1Q02818 461 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 TEFQ10587 303 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 MSS51Q4VC12 460 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 RAPGEF4Q8WZA2 1011 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 STK31Q9BXU1 1019 aa9.78□□□□□ -0.84
LINC00641-202ENST00000555688 ZNF330Q9Y3S2 320 aaPredicted RBP9.78□□□□□ -0.84
LINC00641-202ENST00000555688 CSB-PGBD3P0DP91 1061 aa9.77□□□□□ -0.85
LINC00641-202ENST00000555688 PHKG2P15735 406 aa9.77□□□□□ -0.85
LINC00641-202ENST00000555688 TATP17735 454 aaPredicted RBP9.77□□□□□ -0.85
LINC00641-202ENST00000555688 PTPN5P54829 565 aa9.77□□□□□ -0.85
LINC00641-202ENST00000555688 ARXQ96QS3 562 aa9.77□□□□□ -0.85
LINC00641-202ENST00000555688 ABCA3Q99758 1704 aa9.76□□□□□ -0.85
LINC00641-202ENST00000555688 KDM6AO15550 1401 aaPredicted RBP9.76□□□□□ -0.85
LINC00641-202ENST00000555688 JUNDP17535 347 aa9.76□□□□□ -0.85
LINC00641-202ENST00000555688 HDGFL1Q5TGJ6 251 aa9.76□□□□□ -0.85
LINC00641-202ENST00000555688 GCC1Q96CN9 775 aa9.76□□□□□ -0.85
LINC00641-202ENST00000555688 SPSB2Q99619 263 aa9.76□□□□□ -0.85
LINC00641-202ENST00000555688 MEIS3Q99687 375 aa9.76□□□□□ -0.85
LINC00641-202ENST00000555688 SCN11AQ9UI33 1791 aa9.76□□□□□ -0.85
LINC00641-202ENST00000555688 ATP10DQ9P241 1426 aa9.76□□□□□ -0.85
LINC00641-202ENST00000555688 CYP27B1O15528 508 aa9.75□□□□□ -0.85
LINC00641-202ENST00000555688 ZPR1O75312 459 aa9.75□□□□□ -0.85
LINC00641-202ENST00000555688 CCT4P50991 539 aaKnown RBP9.75□□□□□ -0.85
LINC00641-202ENST00000555688 ANKRD44Q8N8A2 993 aa9.75□□□□□ -0.85
LINC00641-202ENST00000555688 IPO9Q96P70 1041 aaKnown RBP9.75□□□□□ -0.85
LINC00641-202ENST00000555688 PHAXQ9H814 394 aaKnown RBP9.75□□□□□ -0.85
LINC00641-202ENST00000555688 PRDM11Q9NQV5 511 aa9.75□□□□□ -0.85
LINC00641-202ENST00000555688 SPG7Q9UQ90 795 aa9.75□□□□□ -0.85
LINC00641-202ENST00000555688 PKD1L3Q7Z443 1732 aa9.75□□□□□ -0.85
LINC00641-202ENST00000555688 WDR17Q8IZU2 1322 aa9.75□□□□□ -0.85
LINC00641-202ENST00000555688 GIGYF1O75420 1035 aaPredicted RBP9.75□□□□□ -0.85
LINC00641-202ENST00000555688 ANP32AP39687 249 aaKnown RBP9.75□□□□□ -0.85
LINC00641-202ENST00000555688 CEP85Q6P2H3 762 aa9.75□□□□□ -0.85
LINC00641-202ENST00000555688 CHD1LQ86WJ1 897 aa9.75□□□□□ -0.85
LINC00641-202ENST00000555688 RPAP2Q8IXW5 612 aaPredicted RBP9.75□□□□□ -0.85
LINC00641-202ENST00000555688 IFNL2Q8IZJ0 200 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms