RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PNMA8AQ86V59 439 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-218ENST00000555628 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
PRKCH-218ENST00000555628 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRKCH-218ENST00000555628 NPR1P16066 1061 aa12.38□□□□□ -0.43
PRKCH-218ENST00000555628 ST5P78524 1137 aa12.38□□□□□ -0.43
PRKCH-218ENST00000555628 GPC2Q8N158 579 aa12.38□□□□□ -0.43
PRKCH-218ENST00000555628 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
PRKCH-218ENST00000555628 SCNN1DP51172 638 aa12.37□□□□□ -0.43
PRKCH-218ENST00000555628 CST9Q5W186 159 aa12.37□□□□□ -0.43
PRKCH-218ENST00000555628 CAPNS2Q96L46 248 aa12.37□□□□□ -0.43
PRKCH-218ENST00000555628 TEX13AQ9BXU3 409 aaPredicted RBP12.37□□□□□ -0.43
PRKCH-218ENST00000555628 ZSWIM6Q9HCJ5 1215 aa12.37□□□□□ -0.43
PRKCH-218ENST00000555628 KCNQ3O43525 872 aa12.36□□□□□ -0.43
PRKCH-218ENST00000555628 IARSP41252 1262 aaKnown RBP12.36□□□□□ -0.43
PRKCH-218ENST00000555628 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
PRKCH-218ENST00000555628 CLEC4GQ6UXB4 293 aa12.36□□□□□ -0.43
PRKCH-218ENST00000555628 DZIP3Q86Y13 1208 aaKnown RBP12.36□□□□□ -0.43
PRKCH-218ENST00000555628 TTC5Q8N0Z6 440 aa12.36□□□□□ -0.43
PRKCH-218ENST00000555628 PSMD1Q99460 953 aa12.36□□□□□ -0.43
PRKCH-218ENST00000555628 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
PRKCH-218ENST00000555628 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
PRKCH-218ENST00000555628 RIC1Q4ADV7 1423 aa12.36□□□□□ -0.43
PRKCH-218ENST00000555628 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
PRKCH-218ENST00000555628 PPP1R15BQ5SWA1 713 aa12.35□□□□□ -0.43
PRKCH-218ENST00000555628 SLC51AQ86UW1 340 aa12.35□□□□□ -0.43
PRKCH-218ENST00000555628 RTKN2Q8IZC4 609 aa12.35□□□□□ -0.43
PRKCH-218ENST00000555628 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
PRKCH-218ENST00000555628 CASP8AP2Q9UKL3 1982 aa12.34□□□□□ -0.43
PRKCH-218ENST00000555628 LAMB4A4D0S4 1761 aa12.34□□□□□ -0.43
PRKCH-218ENST00000555628 PRAMEF22A3QJZ6 481 aa12.34□□□□□ -0.43
PRKCH-218ENST00000555628 CYP4F22Q6NT55 531 aa12.34□□□□□ -0.43
PRKCH-218ENST00000555628 NBPF5PQ86XG9 351 aaPredicted RBP12.34□□□□□ -0.43
PRKCH-218ENST00000555628 CDAN1Q8IWY9 1227 aa12.34□□□□□ -0.43
PRKCH-218ENST00000555628 FMNL2Q96PY5 1086 aa12.34□□□□□ -0.43
PRKCH-218ENST00000555628 ABT1Q9ULW3 272 aaKnown RBP12.34□□□□□ -0.43
PRKCH-218ENST00000555628 ZNF330Q9Y3S2 320 aaPredicted RBP12.34□□□□□ -0.43
PRKCH-218ENST00000555628 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
PRKCH-218ENST00000555628 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
PRKCH-218ENST00000555628 CCDC85CA6NKD9 419 aa12.33□□□□□ -0.44
PRKCH-218ENST00000555628 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
PRKCH-218ENST00000555628 TRAF5O00463 557 aa12.33□□□□□ -0.44
PRKCH-218ENST00000555628 HSPA5P11021 654 aaKnown RBP12.33□□□□□ -0.44
PRKCH-218ENST00000555628 PIP4K2AP48426 406 aaPredicted RBP12.33□□□□□ -0.44
PRKCH-218ENST00000555628 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
PRKCH-218ENST00000555628 SYNE4Q8N205 404 aa12.33□□□□□ -0.44
PRKCH-218ENST00000555628 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
PRKCH-218ENST00000555628 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
PRKCH-218ENST00000555628 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
PRKCH-218ENST00000555628 GNAT3A8MTJ3 354 aa12.32□□□□□ -0.44
PRKCH-218ENST00000555628 EPS15P42566 896 aa12.32□□□□□ -0.44
PRKCH-218ENST00000555628 ECE1P42892 770 aa12.32□□□□□ -0.44
PRKCH-218ENST00000555628 TEFQ10587 303 aa12.32□□□□□ -0.44
PRKCH-218ENST00000555628 MCOLN1Q9GZU1 580 aa12.32□□□□□ -0.44
PRKCH-218ENST00000555628 TSKSQ9UJT2 592 aa12.32□□□□□ -0.44
PRKCH-218ENST00000555628 PER1O15534 1290 aaPredicted RBP12.31□□□□□ -0.44
PRKCH-218ENST00000555628 DIAPH1O60610 1272 aaKnown RBP12.31□□□□□ -0.44
PRKCH-218ENST00000555628 AOC2O75106 756 aa12.31□□□□□ -0.44
PRKCH-218ENST00000555628 NUDT7P0C024 238 aa12.31□□□□□ -0.44
PRKCH-218ENST00000555628 MAP2K2P36507 400 aa12.31□□□□□ -0.44
PRKCH-218ENST00000555628 MFSD10Q14728 455 aa12.31□□□□□ -0.44
PRKCH-218ENST00000555628 SAPCD2Q86UD0 394 aa12.31□□□□□ -0.44
PRKCH-218ENST00000555628 PTCD2Q8WV60 388 aaKnown RBP12.31□□□□□ -0.44
PRKCH-218ENST00000555628 DDX27Q96GQ7 796 aaKnown RBP12.31□□□□□ -0.44
PRKCH-218ENST00000555628 KNSTRNQ9Y448 316 aa12.31□□□□□ -0.44
PRKCH-218ENST00000555628 NUP98P52948 1817 aa12.3□□□□□ -0.44
PRKCH-218ENST00000555628 MKI67P46013 3256 aaKnown RBP12.3□□□□□ -0.44
PRKCH-218ENST00000555628 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-218ENST00000555628 EIF4G2P78344 907 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRKCH-218ENST00000555628 HLFQ16534 295 aa12.3□□□□□ -0.44
PRKCH-218ENST00000555628 USP50Q70EL3 339 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-218ENST00000555628 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
PRKCH-218ENST00000555628 HHIPL1Q96JK4 782 aa12.3□□□□□ -0.44
PRKCH-218ENST00000555628 NIP7Q9Y221 180 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRKCH-218ENST00000555628 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-218ENST00000555628 HTTP42858 3142 aa12.29□□□□□ -0.44
PRKCH-218ENST00000555628 NPHP1O15259 732 aa12.29□□□□□ -0.44
PRKCH-218ENST00000555628 CA12O43570 354 aa12.29□□□□□ -0.44
PRKCH-218ENST00000555628 BRPF1P55201 1214 aaPredicted RBP12.29□□□□□ -0.44
PRKCH-218ENST00000555628 TPTE2Q6XPS3 522 aa12.29□□□□□ -0.44
PRKCH-218ENST00000555628 TSHZ2Q9NRE2 1034 aa12.29□□□□□ -0.44
PRKCH-218ENST00000555628 PGAP2Q9UHJ9 254 aa12.29□□□□□ -0.44
PRKCH-218ENST00000555628 ZNF652Q9Y2D9 606 aa12.29□□□□□ -0.44
PRKCH-218ENST00000555628 KIF7Q2M1P5 1343 aa12.29□□□□□ -0.44
PRKCH-218ENST00000555628 ALDH1B1P30837 517 aa12.28□□□□□ -0.44
PRKCH-218ENST00000555628 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
PRKCH-218ENST00000555628 BTBD11A6QL63 1104 aa12.27□□□□□ -0.45
PRKCH-218ENST00000555628 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.45
PRKCH-218ENST00000555628 CC2D2BQ6DHV5 1058 aa12.27□□□□□ -0.45
PRKCH-218ENST00000555628 JDP2Q8WYK2 163 aa12.27□□□□□ -0.45
PRKCH-218ENST00000555628 ZIC5Q96T25 663 aa12.27□□□□□ -0.45
PRKCH-218ENST00000555628 GPRC5DQ9NZD1 345 aa12.27□□□□□ -0.45
PRKCH-218ENST00000555628 GJA3Q9Y6H8 435 aa12.27□□□□□ -0.45
PRKCH-218ENST00000555628 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
PRKCH-218ENST00000555628 NPC1L1Q9UHC9 1359 aa12.27□□□□□ -0.45
PRKCH-218ENST00000555628 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
PRKCH-218ENST00000555628 SNRPA1P09661 255 aaKnown RBP12.26□□□□□ -0.45
PRKCH-218ENST00000555628 LMOD1P29536 600 aaPredicted RBP12.26□□□□□ -0.45
PRKCH-218ENST00000555628 EIF6P56537 245 aaKnown RBP12.26□□□□□ -0.45
PRKCH-218ENST00000555628 OXER1Q8TDS5 423 aa12.26□□□□□ -0.45
PRKCH-218ENST00000555628 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms