RNA–Protein interactions for RNA: ENST00000555414.5

APEX1-210, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-210ENST00000555414 SYNE4Q8N205 404 aa14.41□□□□□ -0.1
APEX1-210ENST00000555414 TTLL11Q8NHH1 800 aa14.41□□□□□ -0.1
APEX1-210ENST00000555414 KDM2BQ8NHM5 1336 aa14.41□□□□□ -0.1
APEX1-210ENST00000555414 ANKRD18BA2A2Z9 1011 aa14.41□□□□□ -0.1
APEX1-210ENST00000555414 QSER1Q2KHR3 1735 aa14.4□□□□□ -0.1
APEX1-210ENST00000555414 SF3B3Q15393 1217 aaKnown RBP14.4□□□□□ -0.1
APEX1-210ENST00000555414 MSL1Q68DK7 614 aa14.4□□□□□ -0.1
APEX1-210ENST00000555414 PRR5LQ6MZQ0 368 aa14.4□□□□□ -0.1
APEX1-210ENST00000555414 COPRSQ9NQ92 184 aa14.4□□□□□ -0.1
APEX1-210ENST00000555414 FBXO3Q9UK99 471 aa14.4□□□□□ -0.1
APEX1-210ENST00000555414 NOP58Q9Y2X3 529 aaKnown RBP14.4□□□□□ -0.1
APEX1-210ENST00000555414 DDR1Q08345 913 aa14.39□□□□□ -0.11
APEX1-210ENST00000555414 R3HDM1Q15032 1099 aaKnown RBP14.39□□□□□ -0.11
APEX1-210ENST00000555414 ANKRD45Q5TZF3 282 aa14.39□□□□□ -0.11
APEX1-210ENST00000555414 CDC5LQ99459 802 aaKnown RBP14.39□□□□□ -0.11
APEX1-210ENST00000555414 ITGA6P23229 1130 aa14.38□□□□□ -0.11
APEX1-210ENST00000555414 POLD1P28340 1107 aa14.38□□□□□ -0.11
APEX1-210ENST00000555414 PDE6BP35913 854 aa14.38□□□□□ -0.11
APEX1-210ENST00000555414 BRIP1Q9BX63 1249 aa14.38□□□□□ -0.11
APEX1-210ENST00000555414 LRRCC1Q9C099 1032 aa14.38□□□□□ -0.11
APEX1-210ENST00000555414 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
APEX1-210ENST00000555414 PDZRN3Q9UPQ7 1066 aa14.38□□□□□ -0.11
APEX1-210ENST00000555414 RTL9Q8NET4 1388 aa14.38□□□□□ -0.11
APEX1-210ENST00000555414 RIC1Q4ADV7 1423 aa14.37□□□□□ -0.11
APEX1-210ENST00000555414 IGHMBP2P38935 993 aaKnown RBP14.37□□□□□ -0.11
APEX1-210ENST00000555414 NUCB1Q02818 461 aa14.37□□□□□ -0.11
APEX1-210ENST00000555414 FAM161AQ3B820 660 aa14.37□□□□□ -0.11
APEX1-210ENST00000555414 DDX46Q7L014 1031 aaKnown RBP14.37□□□□□ -0.11
APEX1-210ENST00000555414 RPGRQ92834 1020 aaKnown RBP14.37□□□□□ -0.11
APEX1-210ENST00000555414 KIF1BPQ96EK5 621 aa14.37□□□□□ -0.11
APEX1-210ENST00000555414 GREM2Q9H772 168 aa14.37□□□□□ -0.11
APEX1-210ENST00000555414 EXOC6BQ9Y2D4 811 aa14.37□□□□□ -0.11
APEX1-210ENST00000555414 TUBGCP6Q96RT7 1819 aa14.36□□□□□ -0.11
APEX1-210ENST00000555414 COL24A1Q17RW2 1714 aa14.36□□□□□ -0.11
APEX1-210ENST00000555414 CIAO1O76071 339 aa14.36□□□□□ -0.11
APEX1-210ENST00000555414 IL15P40933 162 aaPredicted RBP14.36□□□□□ -0.11
APEX1-210ENST00000555414 RFX5P48382 616 aaPredicted RBP14.36□□□□□ -0.11
APEX1-210ENST00000555414 PTPN12Q05209 780 aaKnown RBP14.36□□□□□ -0.11
APEX1-210ENST00000555414 LDHAL6AQ6ZMR3 332 aa14.36□□□□□ -0.11
APEX1-210ENST00000555414 CHD1LQ86WJ1 897 aa14.36□□□□□ -0.11
APEX1-210ENST00000555414 RBM17Q96I25 401 aaKnown RBP14.36□□□□□ -0.11
APEX1-210ENST00000555414 CCDC85AQ96PX6 553 aaPredicted RBP14.36□□□□□ -0.11
APEX1-210ENST00000555414 MPHOSPH8Q99549 860 aa14.36□□□□□ -0.11
APEX1-210ENST00000555414 ABCC12Q96J65 1359 aa14.35□□□□□ -0.11
APEX1-210ENST00000555414 EYA2O00167 538 aa14.35□□□□□ -0.11
APEX1-210ENST00000555414 APBB1O00213 710 aa14.35□□□□□ -0.11
APEX1-210ENST00000555414 ANKRD18AQ8IVF6 992 aa14.35□□□□□ -0.11
APEX1-210ENST00000555414 SIL1Q9H173 461 aa14.35□□□□□ -0.11
APEX1-210ENST00000555414 CNNM1Q9NRU3 951 aa14.35□□□□□ -0.11
APEX1-210ENST00000555414 PA2G4Q9UQ80 394 aaKnown RBP14.35□□□□□ -0.11
APEX1-210ENST00000555414 CLASRPQ8N2M8 674 aaKnown RBP14.34□□□□□ -0.11
APEX1-210ENST00000555414 CCDC24Q8N4L8 307 aa14.34□□□□□ -0.11
APEX1-210ENST00000555414 RHPN1Q8TCX5 695 aa14.34□□□□□ -0.11
APEX1-210ENST00000555414 KLRG2A4D1S0 409 aaPredicted RBP14.33□□□□□ -0.11
APEX1-210ENST00000555414 ZBTB7AO95365 584 aa14.33□□□□□ -0.11
APEX1-210ENST00000555414 KLHDC4Q8TBB5 520 aa14.33□□□□□ -0.11
APEX1-210ENST00000555414 PDGFDQ9GZP0 370 aaPredicted RBP14.33□□□□□ -0.11
APEX1-210ENST00000555414 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.11
APEX1-210ENST00000555414 H0YIN7 160 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 ALDH1B1P30837 517 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 RPS8P62241 208 aaKnown RBP14.32□□□□□ -0.12
APEX1-210ENST00000555414 CRY2Q49AN0 593 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 ZNF594Q96JF6 807 aaPredicted RBP14.32□□□□□ -0.12
APEX1-210ENST00000555414 AKAP2Q9Y2D5 859 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 MROH5Q6ZUA9 1318 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 BBOX1O75936 387 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 NPR1P16066 1061 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 C3orf67Q6ZVT6 689 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 TMC4Q7Z404 712 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 CRAMP1Q96RY5 1269 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 LNPKQ9C0E8 428 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 TMX4Q9H1E5 349 aaPredicted RBP14.32□□□□□ -0.12
APEX1-210ENST00000555414 SEC31BQ9NQW1 1179 aa14.32□□□□□ -0.12
APEX1-210ENST00000555414 BSDC1Q9NW68 430 aaPredicted RBP14.32□□□□□ -0.12
APEX1-210ENST00000555414 ATF5Q9Y2D1 282 aaPredicted RBP14.32□□□□□ -0.12
APEX1-210ENST00000555414 LAMB2P55268 1798 aa14.31□□□□□ -0.12
APEX1-210ENST00000555414 PSDA5PKW4 1024 aaPredicted RBP14.31□□□□□ -0.12
APEX1-210ENST00000555414 IFIT2P09913 472 aaKnown RBP14.31□□□□□ -0.12
APEX1-210ENST00000555414 HOXA10P31260 410 aaPredicted RBP14.31□□□□□ -0.12
APEX1-210ENST00000555414 METTL24Q5JXM2 366 aa14.31□□□□□ -0.12
APEX1-210ENST00000555414 MASTLQ96GX5 879 aa14.31□□□□□ -0.12
APEX1-210ENST00000555414 MYH3P11055 1940 aa14.3□□□□□ -0.12
APEX1-210ENST00000555414 GRAPQ13588 217 aa14.3□□□□□ -0.12
APEX1-210ENST00000555414 ATG9AQ7Z3C6 839 aa14.3□□□□□ -0.12
APEX1-210ENST00000555414 DDX60Q8IY21 1712 aaKnown RBP14.3□□□□□ -0.12
APEX1-210ENST00000555414 GRAPLQ8TC17 118 aaPredicted RBP14.3□□□□□ -0.12
APEX1-210ENST00000555414 GPATCH3Q96I76 525 aa14.3□□□□□ -0.12
APEX1-210ENST00000555414 BCL11AQ9H165 835 aa14.3□□□□□ -0.12
APEX1-210ENST00000555414 GPR108Q9NPR9 543 aa14.3□□□□□ -0.12
APEX1-210ENST00000555414 RIPOR2Q9Y4F9 1068 aa14.3□□□□□ -0.12
APEX1-210ENST00000555414 SMARCA5O60264 1052 aaPredicted RBP14.29□□□□□ -0.12
APEX1-210ENST00000555414 SASH1O94885 1247 aa14.29□□□□□ -0.12
APEX1-210ENST00000555414 TFCP2Q12800 502 aa14.29□□□□□ -0.12
APEX1-210ENST00000555414 LRRC24Q50LG9 513 aa14.29□□□□□ -0.12
APEX1-210ENST00000555414 STYK1Q6J9G0 422 aa14.29□□□□□ -0.12
APEX1-210ENST00000555414 C2CD5Q86YS7 1000 aa14.29□□□□□ -0.12
APEX1-210ENST00000555414 ANKRD2Q9GZV1 360 aa14.29□□□□□ -0.12
APEX1-210ENST00000555414 SPON1Q9HCB6 807 aa14.29□□□□□ -0.12
APEX1-210ENST00000555414 IL1RAPL2Q9NP60 686 aa14.29□□□□□ -0.12
APEX1-210ENST00000555414 NRXN2Q9P2S2 1712 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms