RNA–Protein interactions for RNA: ENST00000555322.5

RPGRIP1-207, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-207ENST00000555322 HMGB2P26583 209 aaKnown RBP11.12□□□□□ -0.63
RPGRIP1-207ENST00000555322 CLEC4GQ6UXB4 293 aa11.12□□□□□ -0.63
RPGRIP1-207ENST00000555322 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
RPGRIP1-207ENST00000555322 DIAPH3Q9NSV4 1193 aa11.12□□□□□ -0.63
RPGRIP1-207ENST00000555322 AKAP2Q9Y2D5 859 aa11.12□□□□□ -0.63
RPGRIP1-207ENST00000555322 TFCP2Q12800 502 aa11.12□□□□□ -0.63
RPGRIP1-207ENST00000555322 MEX3CQ5U5Q3 659 aaKnown RBP11.12□□□□□ -0.63
RPGRIP1-207ENST00000555322 ACSBG1Q96GR2 724 aa11.12□□□□□ -0.63
RPGRIP1-207ENST00000555322 GJD4Q96KN9 370 aaPredicted RBP11.12□□□□□ -0.63
RPGRIP1-207ENST00000555322 TRPC5Q9UL62 973 aaPredicted RBP11.12□□□□□ -0.63
RPGRIP1-207ENST00000555322 PDE8AO60658 829 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 CAMTA2O94983 1202 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 SLC4A3P48751 1232 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 CTSWP56202 376 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 ITPK1Q13572 414 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 HLFQ16534 295 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 ZNF330Q9Y3S2 320 aaPredicted RBP11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 IFIT5Q13325 482 aaKnown RBP11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 KLHDC4Q8TBB5 520 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 ANO2Q9NQ90 1003 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 DBNLQ9UJU6 430 aaKnown RBP11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 ARAP2Q8WZ64 1704 aa11.11□□□□□ -0.63
RPGRIP1-207ENST00000555322 HSPA4P34932 840 aa11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 HAUS7Q99871 368 aa11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 CHMP5Q9NZZ3 219 aa11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 COL24A1Q17RW2 1714 aa11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 DDIT3P35638 169 aa11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 RTL5Q5HYW3 569 aaPredicted RBP11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 CCDC8Q9H0W5 538 aaPredicted RBP11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 AFF2P51816 1311 aa11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 UBN2Q6ZU65 1347 aa11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 SH3TC1Q8TE82 1336 aa11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 RIC1Q4ADV7 1423 aa11.1□□□□□ -0.63
RPGRIP1-207ENST00000555322 SBF2Q86WG5 1849 aa11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 ANKRD18BA2A2Z9 1011 aa11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 IRS4O14654 1257 aaPredicted RBP11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 HSPA1LP34931 641 aa11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 JARID2Q92833 1246 aaPredicted RBP11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 LSG1Q9H089 658 aaKnown RBP11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 TLR7Q9NYK1 1049 aaKnown RBP11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 CEP126Q9P2H0 1117 aa11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 TRMT112Q9UI30 125 aaKnown RBP11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 MED23Q9ULK4 1368 aa11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 DDX60Q8IY21 1712 aaKnown RBP11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 LRRFIP1Q32MZ4 808 aaKnown RBP11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 TTLL11Q8NHH1 800 aa11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 KCNB2Q92953 911 aa11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 FAM89AQ96GI7 184 aa11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 UTP14AQ9BVJ6 771 aaKnown RBP11.09□□□□□ -0.63
RPGRIP1-207ENST00000555322 TAF7LQ5H9L4 462 aa11.08□□□□□ -0.64
RPGRIP1-207ENST00000555322 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.08□□□□□ -0.64
RPGRIP1-207ENST00000555322 MYH14Q7Z406 1995 aaKnown RBP11.08□□□□□ -0.64
RPGRIP1-207ENST00000555322 KCNQ2O43526 872 aa11.08□□□□□ -0.64
RPGRIP1-207ENST00000555322 ZNF512BQ96KM6 892 aaPredicted RBP11.08□□□□□ -0.64
RPGRIP1-207ENST00000555322 FSD1Q9BTV5 496 aa11.08□□□□□ -0.64
RPGRIP1-207ENST00000555322 MROH5Q6ZUA9 1318 aa11.07□□□□□ -0.64
RPGRIP1-207ENST00000555322 GPTP24298 496 aa11.07□□□□□ -0.64
RPGRIP1-207ENST00000555322 LINC00116Q8NCU8 138 aa11.07□□□□□ -0.64
RPGRIP1-207ENST00000555322 DBNDD2Q9BQY9 259 aa11.07□□□□□ -0.64
RPGRIP1-207ENST00000555322 TBC1D2BQ9UPU7 963 aa11.07□□□□□ -0.64
RPGRIP1-207ENST00000555322 TAF1LQ8IZX4 1826 aa11.07□□□□□ -0.64
RPGRIP1-207ENST00000555322 CCDC171Q6TFL3 1326 aa11.07□□□□□ -0.64
RPGRIP1-207ENST00000555322 NTSR2O95665 410 aa11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 MAP4K4O95819 1239 aaPredicted RBP11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 ITGA6P23229 1130 aa11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 TM6SF1Q9BZW5 370 aa11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 CWC22Q9HCG8 908 aaKnown RBP11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 A0A1B0GUL7 405 aa11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 RPS6KA4O75676 772 aa11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 CWC27Q6UX04 472 aaKnown RBP11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 KBTBD3Q8NAB2 608 aa11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 BOLA2Q9H3K6 86 aa11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 RIPOR2Q9Y4F9 1068 aa11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 C4BP0C0L5 1744 aa11.06□□□□□ -0.64
RPGRIP1-207ENST00000555322 A0A0G2JS52 829 aa11.05□□□□□ -0.64
RPGRIP1-207ENST00000555322 NFKBIBQ15653 356 aa11.05□□□□□ -0.64
RPGRIP1-207ENST00000555322 CCDC152Q4G0S7 254 aa11.05□□□□□ -0.64
RPGRIP1-207ENST00000555322 LRRC24Q50LG9 513 aa11.05□□□□□ -0.64
RPGRIP1-207ENST00000555322 CCDC158Q5M9N0 1113 aa11.05□□□□□ -0.64
RPGRIP1-207ENST00000555322 HMG20BQ9P0W2 317 aa11.05□□□□□ -0.64
RPGRIP1-207ENST00000555322 SUSD4Q5VX71 490 aa11.05□□□□□ -0.64
RPGRIP1-207ENST00000555322 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
RPGRIP1-207ENST00000555322 SLKQ9H2G2 1235 aaPredicted RBP11.05□□□□□ -0.64
RPGRIP1-207ENST00000555322 GREM2Q9H772 168 aa11.05□□□□□ -0.64
RPGRIP1-207ENST00000555322 HSP90AA1P07900 732 aaKnown RBP11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 ADRA2BP18089 450 aa11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 NMIQ13287 307 aaPredicted RBP11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 RNF20Q5VTR2 975 aa11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 VGLL2Q8N8G2 317 aa11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 MAP4K1Q92918 833 aa11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 NYXQ9GZU5 481 aa11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 HELLSQ9NRZ9 838 aa11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 PAG1Q9NWQ8 432 aa11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 NARFQ9UHQ1 456 aa11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 CD2BP2O95400 341 aaKnown RBP11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 ZFYP08048 801 aaPredicted RBP11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 PTMSP20962 102 aa11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 LDHAL6AQ6ZMR3 332 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms