RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 MRC1P22897 1456 aa12.64□□□□□ -0.39
MTHFD1-210ENST00000555252 KDM6AO15550 1401 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 ZC3H6P61129 1189 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 PLCB2Q00722 1185 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 FOXD4L6Q3SYB3 417 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 FOXD4L3Q6VB84 417 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 PLA2G4DQ86XP0 818 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 MPNDQ8N594 471 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 TDRD7Q8NHU6 1098 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 DCAF5Q96JK2 942 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 METTL22Q9BUU2 404 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 BICC1Q9H694 974 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 SNRKQ9NRH2 765 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 COL15A1P39059 1388 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 RGPD5Q99666 1765 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 CCDC66A2RUB6 948 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 PRAMEF22A3QJZ6 481 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 SNRPA1P09661 255 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 GJB2P29033 226 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 TYRO3Q06418 890 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 CCDC112Q8NEF3 446 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 KAZALD1Q96I82 304 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 MRVI1Q9Y6F6 885 aa12.63□□□□□ -0.39
MTHFD1-210ENST00000555252 NEURL1BA8MQ27 555 aa12.62□□□□□ -0.39
MTHFD1-210ENST00000555252 IGKV5-2P06315 115 aa12.62□□□□□ -0.39
MTHFD1-210ENST00000555252 PTGS1P23219 599 aa12.62□□□□□ -0.39
MTHFD1-210ENST00000555252 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-210ENST00000555252 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-210ENST00000555252 SLFNL1Q499Z3 407 aa12.62□□□□□ -0.39
MTHFD1-210ENST00000555252 RNF20Q5VTR2 975 aa12.62□□□□□ -0.39
MTHFD1-210ENST00000555252 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
MTHFD1-210ENST00000555252 PA2G4Q9UQ80 394 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-210ENST00000555252 SASH1O94885 1247 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 TNNT1P13805 278 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 GCKRQ14397 625 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 ZNF771Q7L3S4 317 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 SPC24Q8NBT2 197 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 KCND1Q9NSA2 647 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 COL18A1P39060 1754 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 ZNF75DP51815 510 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 ZSCAN25Q6NSZ9 544 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 RASEFQ8IZ41 740 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 ZNF397Q8NF99 534 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 XAGE3Q8WTP9 111 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 ZSWIM6Q9HCJ5 1215 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 CYP46A1Q9Y6A2 500 aa12.61□□□□□ -0.39
MTHFD1-210ENST00000555252 FAM177BA6PVY3 158 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 KIF2AO00139 706 aaPredicted RBP12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 CSB-PGBD3P0DP91 1061 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 PSMA5P28066 241 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 SARM1Q6SZW1 724 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 CCDC186Q7Z3E2 898 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 KRT222Q8N1A0 295 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 ALDH8A1Q9H2A2 487 aaPredicted RBP12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 TNS3Q68CZ2 1445 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 C5P01031 1676 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 CPDO75976 1380 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 MEGF6O75095 1541 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 CASTP20810 708 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 FGD1P98174 961 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 SLC39A6Q13433 755 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 NECTIN1Q15223 517 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 ANKRD13DQ6ZTN6 518 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 COPS6Q7L5N1 327 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 KIF18AQ8NI77 898 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 EAF2Q96CJ1 260 aaPredicted RBP12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 MYD88Q99836 296 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 TNMDQ9H2S6 317 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 COPRSQ9NQ92 184 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 PDRG1Q9NUG6 133 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 FAM53CQ9NYF3 392 aa12.6□□□□□ -0.39
MTHFD1-210ENST00000555252 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
MTHFD1-210ENST00000555252 TMEM94Q12767 1356 aa12.59□□□□□ -0.39
MTHFD1-210ENST00000555252 SLFN14P0C7P3 912 aa12.59□□□□□ -0.39
MTHFD1-210ENST00000555252 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
MTHFD1-210ENST00000555252 MAP4K1Q92918 833 aa12.59□□□□□ -0.39
MTHFD1-210ENST00000555252 CLSTN2Q9H4D0 955 aa12.59□□□□□ -0.39
MTHFD1-210ENST00000555252 CBX8Q9HC52 389 aa12.59□□□□□ -0.39
MTHFD1-210ENST00000555252 STRCQ7RTU9 1775 aa12.59□□□□□ -0.39
MTHFD1-210ENST00000555252 RFX7Q2KHR2 1363 aa12.59□□□□□ -0.39
MTHFD1-210ENST00000555252 MYL6BP14649 208 aa12.58□□□□□ -0.39
MTHFD1-210ENST00000555252 PTH1RQ03431 593 aa12.58□□□□□ -0.39
MTHFD1-210ENST00000555252 ANKRD1Q15327 319 aa12.58□□□□□ -0.39
MTHFD1-210ENST00000555252 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.39
MTHFD1-210ENST00000555252 TTC6Q86TZ1 520 aa12.58□□□□□ -0.39
MTHFD1-210ENST00000555252 CCDC83Q8IWF9 413 aa12.58□□□□□ -0.39
MTHFD1-210ENST00000555252 ZNF496Q96IT1 587 aaPredicted RBP12.58□□□□□ -0.39
MTHFD1-210ENST00000555252 JAKMIP1Q96N16 626 aaKnown RBP12.58□□□□□ -0.39
MTHFD1-210ENST00000555252 TRIM5Q9C035 493 aa12.58□□□□□ -0.39
MTHFD1-210ENST00000555252 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.4
MTHFD1-210ENST00000555252 LRP10Q7Z4F1 713 aa12.58□□□□□ -0.4
MTHFD1-210ENST00000555252 DRC7Q8IY82 874 aa12.58□□□□□ -0.4
MTHFD1-210ENST00000555252 MRFAP1L1Q96HT8 127 aa12.58□□□□□ -0.4
MTHFD1-210ENST00000555252 C16orf45Q96MC5 204 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms