RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 DDNO94850 711 aaPredicted RBP27.63■■■□□ 2.01
SYNE2-218ENST00000555241 TMC4Q7Z404 712 aa27.63■■■□□ 2.01
SYNE2-218ENST00000555241 SLC51AQ86UW1 340 aa27.63■■■□□ 2.01
SYNE2-218ENST00000555241 SP8Q8IXZ3 490 aa27.63■■■□□ 2.01
SYNE2-218ENST00000555241 FZD9O00144 591 aa27.62■■■□□ 2.01
SYNE2-218ENST00000555241 PCCAP05165 728 aaPredicted RBP27.62■■■□□ 2.01
SYNE2-218ENST00000555241 JDP2Q8WYK2 163 aa27.62■■■□□ 2.01
SYNE2-218ENST00000555241 COL4A5P29400 1685 aa27.62■■■□□ 2.01
SYNE2-218ENST00000555241 G2E3Q7L622 706 aa27.61■■■□□ 2.01
SYNE2-218ENST00000555241 ZNF521Q96K83 1311 aa27.61■■■□□ 2.01
SYNE2-218ENST00000555241 ZNF541Q9H0D2 1346 aa27.61■■■□□ 2.01
SYNE2-218ENST00000555241 NEXNQ0ZGT2 675 aa27.6■■■□□ 2.01
SYNE2-218ENST00000555241 SMC1BQ8NDV3 1235 aa27.6■■■□□ 2.01
SYNE2-218ENST00000555241 L3MBTL3Q96JM7 780 aaPredicted RBP27.6■■■□□ 2.01
SYNE2-218ENST00000555241 FLIIQ13045 1269 aa27.59■■■□□ 2.01
SYNE2-218ENST00000555241 SUPT20HQ8NEM7 779 aa27.59■■■□□ 2.01
SYNE2-218ENST00000555241 VPS33BQ9H267 617 aa27.59■■■□□ 2.01
SYNE2-218ENST00000555241 IGKV5-2P06315 115 aa27.58■■■□□ 2.01
SYNE2-218ENST00000555241 LARGE2Q8N3Y3 721 aa27.58■■■□□ 2.01
SYNE2-218ENST00000555241 RTFDC1Q9BY42 306 aaPredicted RBP27.58■■■□□ 2.01
SYNE2-218ENST00000555241 COL4A1P02462 1669 aa27.57■■■□□ 2
SYNE2-218ENST00000555241 IQCA1LA6NCM1 817 aa27.57■■■□□ 2
SYNE2-218ENST00000555241 APLP1P51693 650 aa27.57■■■□□ 2
SYNE2-218ENST00000555241 DPP8Q6V1X1 898 aaPredicted RBP27.57■■■□□ 2
SYNE2-218ENST00000555241 MPNDQ8N594 471 aa27.57■■■□□ 2
SYNE2-218ENST00000555241 CDHR2Q9BYE9 1310 aa27.57■■■□□ 2
SYNE2-218ENST00000555241 PDE8AO60658 829 aa27.56■■■□□ 2
SYNE2-218ENST00000555241 CELF1Q92879 486 aaKnown RBP27.56■■■□□ 2
SYNE2-218ENST00000555241 DUOX1Q9NRD9 1551 aa27.56■■■□□ 2
SYNE2-218ENST00000555241 CCER2I3L3R5 266 aa27.55■■■□□ 2
SYNE2-218ENST00000555241 PPIP5K2O43314 1243 aa27.55■■■□□ 2
SYNE2-218ENST00000555241 FKBP5Q13451 457 aaPredicted RBP27.55■■■□□ 2
SYNE2-218ENST00000555241 GPC2Q8N158 579 aa27.55■■■□□ 2
SYNE2-218ENST00000555241 LTBP1Q14766 1721 aa27.55■■■□□ 2
SYNE2-218ENST00000555241 NEURL1BA8MQ27 555 aa27.54■■■□□ 2
SYNE2-218ENST00000555241 EIF6P56537 245 aaKnown RBP27.54■■■□□ 2
SYNE2-218ENST00000555241 AOC3Q16853 763 aa27.53■■■□□ 2
SYNE2-218ENST00000555241 CWF19L2Q2TBE0 894 aaKnown RBP27.53■■■□□ 2
SYNE2-218ENST00000555241 CCDC152Q4G0S7 254 aa27.53■■■□□ 2
SYNE2-218ENST00000555241 NIM1KQ8IY84 436 aa27.53■■■□□ 2
SYNE2-218ENST00000555241 DNAAF4Q8WXU2 420 aa27.52■■■□□ 2
SYNE2-218ENST00000555241 JARID2Q92833 1246 aaPredicted RBP27.52■■■□□ 2
SYNE2-218ENST00000555241 RPS8P62241 208 aaKnown RBP27.51■■□□□ 1.99
SYNE2-218ENST00000555241 SPEF2Q9C093 1822 aa27.51■■□□□ 1.99
SYNE2-218ENST00000555241 KIAA2012Q0VF49 1180 aa27.5■■□□□ 1.99
SYNE2-218ENST00000555241 TAF1DQ9H5J8 278 aaPredicted RBP27.5■■□□□ 1.99
SYNE2-218ENST00000555241 HACL1Q9UJ83 578 aa27.5■■□□□ 1.99
SYNE2-218ENST00000555241 SEC31BQ9NQW1 1179 aa27.49■■□□□ 1.99
SYNE2-218ENST00000555241 ADAMTSL1Q8N6G6 1762 aa27.49■■□□□ 1.99
SYNE2-218ENST00000555241 LINS1Q8NG48 757 aa27.48■■□□□ 1.99
SYNE2-218ENST00000555241 NSFL1CQ9UNZ2 370 aaKnown RBP27.48■■□□□ 1.99
SYNE2-218ENST00000555241 E9PSI1 815 aa27.47■■□□□ 1.99
SYNE2-218ENST00000555241 H7C1W4 665 aa27.47■■□□□ 1.99
SYNE2-218ENST00000555241 CTSWP56202 376 aa27.47■■□□□ 1.99
SYNE2-218ENST00000555241 GCKRQ14397 625 aa27.47■■□□□ 1.99
SYNE2-218ENST00000555241 ZNRF3Q9ULT6 936 aa27.47■■□□□ 1.99
SYNE2-218ENST00000555241 GJA3Q9Y6H8 435 aa27.47■■□□□ 1.99
SYNE2-218ENST00000555241 CHADLQ6NUI6 762 aa27.46■■□□□ 1.99
SYNE2-218ENST00000555241 POTEIP0CG38 1075 aa27.45■■□□□ 1.98
SYNE2-218ENST00000555241 POTEJP0CG39 1038 aa27.45■■□□□ 1.98
SYNE2-218ENST00000555241 EPHX2P34913 555 aa27.45■■□□□ 1.98
SYNE2-218ENST00000555241 UBE3BQ7Z3V4 1068 aa27.45■■□□□ 1.98
SYNE2-218ENST00000555241 LDHDQ86WU2 507 aa27.45■■□□□ 1.98
SYNE2-218ENST00000555241 CCDC85AQ96PX6 553 aaPredicted RBP27.45■■□□□ 1.98
SYNE2-218ENST00000555241 GPSM2P81274 684 aa27.44■■□□□ 1.98
SYNE2-218ENST00000555241 TTLL11Q8NHH1 800 aa27.44■■□□□ 1.98
SYNE2-218ENST00000555241 RTL9Q8NET4 1388 aa27.44■■□□□ 1.98
SYNE2-218ENST00000555241 PNMA8AQ86V59 439 aaPredicted RBP27.43■■□□□ 1.98
SYNE2-218ENST00000555241 PLA2G12BQ9BX93 195 aa27.43■■□□□ 1.98
SYNE2-218ENST00000555241 LMOD1P29536 600 aaPredicted RBP27.42■■□□□ 1.98
SYNE2-218ENST00000555241 CXCL9Q07325 125 aa27.42■■□□□ 1.98
SYNE2-218ENST00000555241 WASHC4Q2M389 1173 aa27.42■■□□□ 1.98
SYNE2-218ENST00000555241 ANKRD18AQ8IVF6 992 aa27.42■■□□□ 1.98
SYNE2-218ENST00000555241 CDC5LQ99459 802 aaKnown RBP27.42■■□□□ 1.98
SYNE2-218ENST00000555241 PODXL2Q9NZ53 605 aa27.42■■□□□ 1.98
SYNE2-218ENST00000555241 POLLQ9UGP5 575 aa27.42■■□□□ 1.98
SYNE2-218ENST00000555241 F6X3S4 739 aa27.41■■□□□ 1.98
SYNE2-218ENST00000555241 C6orf229H3BNL8 230 aa27.41■■□□□ 1.98
SYNE2-218ENST00000555241 SCNN1DP51172 638 aa27.41■■□□□ 1.98
SYNE2-218ENST00000555241 CASP7P55210 303 aa27.41■■□□□ 1.98
SYNE2-218ENST00000555241 SLFN5Q08AF3 891 aa27.41■■□□□ 1.98
SYNE2-218ENST00000555241 EAPPQ56P03 285 aaPredicted RBP27.41■■□□□ 1.98
SYNE2-218ENST00000555241 EYA3Q99504 573 aa27.41■■□□□ 1.98
SYNE2-218ENST00000555241 BEND3Q5T5X7 828 aa27.4■■□□□ 1.98
SYNE2-218ENST00000555241 DNAJC5GQ8N7S2 189 aa27.4■■□□□ 1.98
SYNE2-218ENST00000555241 TBC1D16Q8TBP0 767 aa27.4■■□□□ 1.98
SYNE2-218ENST00000555241 GREM2Q9H772 168 aa27.4■■□□□ 1.98
SYNE2-218ENST00000555241 CIAPIN1Q6FI81 312 aa27.39■■□□□ 1.98
SYNE2-218ENST00000555241 HTRA3P83110 453 aa27.38■■□□□ 1.97
SYNE2-218ENST00000555241 ANKIB1Q9P2G1 1089 aa27.38■■□□□ 1.97
SYNE2-218ENST00000555241 PSME4Q14997 1843 aa27.38■■□□□ 1.97
SYNE2-218ENST00000555241 YDJCA8MPS7 323 aa27.37■■□□□ 1.97
SYNE2-218ENST00000555241 TNIP1Q15025 636 aa27.37■■□□□ 1.97
SYNE2-218ENST00000555241 SCN9AQ15858 1988 aa27.37■■□□□ 1.97
SYNE2-218ENST00000555241 RIMBP2O15034 1052 aa27.36■■□□□ 1.97
SYNE2-218ENST00000555241 EPS15P42566 896 aa27.36■■□□□ 1.97
SYNE2-218ENST00000555241 GGA1Q9UJY5 639 aa27.36■■□□□ 1.97
SYNE2-218ENST00000555241 CLEC11AQ9Y240 323 aa27.36■■□□□ 1.97
SYNE2-218ENST00000555241 XDHP47989 1333 aa27.36■■□□□ 1.97
SYNE2-218ENST00000555241 RAD17O75943 681 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms