RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 DUOX1Q9NRD9 1551 aa7.97□□□□□ -1.13
PRKCH-214ENST00000555233 POLRMTO00411 1230 aaKnown RBP7.96□□□□□ -1.14
PRKCH-214ENST00000555233 PHF14O94880 888 aa7.96□□□□□ -1.14
PRKCH-214ENST00000555233 CT47B1P0C2W7 299 aaPredicted RBP7.96□□□□□ -1.14
PRKCH-214ENST00000555233 EIF2S2P20042 333 aaKnown RBP7.96□□□□□ -1.14
PRKCH-214ENST00000555233 NFIXQ14938 502 aa7.96□□□□□ -1.14
PRKCH-214ENST00000555233 USPL1Q5W0Q7 1092 aa7.96□□□□□ -1.14
PRKCH-214ENST00000555233 TBC1D9BQ66K14 1250 aa7.96□□□□□ -1.14
PRKCH-214ENST00000555233 COPS6Q7L5N1 327 aa7.96□□□□□ -1.14
PRKCH-214ENST00000555233 ZNF34Q8IZ26 560 aa7.96□□□□□ -1.14
PRKCH-214ENST00000555233 PHF12Q96QT6 1004 aa7.96□□□□□ -1.14
PRKCH-214ENST00000555233 DBF4Q9UBU7 674 aaPredicted RBP7.96□□□□□ -1.14
PRKCH-214ENST00000555233 TBC1D2BQ9UPU7 963 aa7.96□□□□□ -1.14
PRKCH-214ENST00000555233 RTCBQ9Y3I0 505 aaKnown RBP7.96□□□□□ -1.14
PRKCH-214ENST00000555233 ABCC4O15439 1325 aa7.96□□□□□ -1.14
PRKCH-214ENST00000555233 DICER1Q9UPY3 1922 aaKnown RBP7.95□□□□□ -1.14
PRKCH-214ENST00000555233 SPDYE16A6NNV3 312 aaPredicted RBP7.95□□□□□ -1.14
PRKCH-214ENST00000555233 ERVV-1B6SEH8 477 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 TRAK2O60296 914 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 BCAR3O75815 825 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 MYL6BP14649 208 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 CASP7P55210 303 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 ALDH1L2Q3SY69 923 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 GIGYF2Q6Y7W6 1299 aaKnown RBP7.95□□□□□ -1.14
PRKCH-214ENST00000555233 SLC51AQ86UW1 340 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 DZIP3Q86Y13 1208 aaKnown RBP7.95□□□□□ -1.14
PRKCH-214ENST00000555233 SLC16A10Q8TF71 515 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 CCDC102AQ96A19 550 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 BCL2L13Q9BXK5 485 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 TFCP2L1Q9NZI6 479 aa7.95□□□□□ -1.14
PRKCH-214ENST00000555233 PSME4Q14997 1843 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 CHD4Q14839 1912 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 ZBTB7AO95365 584 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 NTSR2O95665 410 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 RLBP1P12271 317 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 MAP2K5Q13163 448 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 TRIM28Q13263 835 aaKnown RBP7.94□□□□□ -1.14
PRKCH-214ENST00000555233 PPP1R15BQ5SWA1 713 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 CCDC30Q5VVM6 783 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 MSL1Q68DK7 614 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 IFNL1Q8IU54 200 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 KCTD17Q8N5Z5 321 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 PLBD2Q8NHP8 589 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 ZNF428Q96B54 188 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 MTFR1LQ9H019 292 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 HYPKQ9NX55 129 aa7.94□□□□□ -1.14
PRKCH-214ENST00000555233 ARAP2Q8WZ64 1704 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 F6X3S4 739 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 GPR37O15354 613 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 ST18O60284 1047 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 AMHR2Q16671 573 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 TRAPPC3LQ5T215 181 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 BEND3Q5T5X7 828 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 CLEC4GQ6UXB4 293 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 C3orf67Q6ZVT6 689 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 NLRP10Q86W26 655 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 PARP9Q8IXQ6 854 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 SYNE4Q8N205 404 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 CLUAP1Q96AJ1 413 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 KAZALD1Q96I82 304 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 ZBTB3Q9H5J0 574 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 GOPCQ9HD26 462 aa7.93□□□□□ -1.14
PRKCH-214ENST00000555233 SCN9AQ15858 1988 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 KLRG2A4D1S0 409 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-214ENST00000555233 PI4KAP2A4QPH2 592 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 DPYSL4O14531 572 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 MMP10P09238 476 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 TRIM27P14373 513 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 KCNA3P22001 575 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 SUSD4Q5VX71 490 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 PRR5LQ6MZQ0 368 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 KSR2Q6VAB6 950 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 PI4KAP1Q8N8J0 262 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 FLAD1Q8NFF5 587 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 MS4A4AQ96JQ5 239 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 PCMTD1Q96MG8 357 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-214ENST00000555233 METTL22Q9BUU2 404 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-214ENST00000555233 UTYO14607 1347 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 COL4A5P29400 1685 aa7.92□□□□□ -1.14
PRKCH-214ENST00000555233 NEURL1BA8MQ27 555 aa7.91□□□□□ -1.14
PRKCH-214ENST00000555233 TCIRG1Q13488 830 aa7.91□□□□□ -1.14
PRKCH-214ENST00000555233 TTLL12Q14166 644 aaPredicted RBP7.91□□□□□ -1.14
PRKCH-214ENST00000555233 CWF19L2Q2TBE0 894 aaKnown RBP7.91□□□□□ -1.14
PRKCH-214ENST00000555233 C20orf194Q5TEA3 1177 aa7.91□□□□□ -1.14
PRKCH-214ENST00000555233 ANKRD13DQ6ZTN6 518 aa7.91□□□□□ -1.14
PRKCH-214ENST00000555233 YTHDC1Q96MU7 727 aaKnown RBP7.91□□□□□ -1.14
PRKCH-214ENST00000555233 MAP3K2Q9Y2U5 619 aa7.91□□□□□ -1.14
PRKCH-214ENST00000555233 TIAM2Q8IVF5 1701 aa7.9□□□□□ -1.14
PRKCH-214ENST00000555233 PTPRCP08575 1304 aa7.9□□□□□ -1.14
PRKCH-214ENST00000555233 A0A087WZG4 1122 aa7.9□□□□□ -1.14
PRKCH-214ENST00000555233 RFC4P35249 363 aa7.9□□□□□ -1.14
PRKCH-214ENST00000555233 AIMP1Q12904 312 aaKnown RBP7.9□□□□□ -1.14
PRKCH-214ENST00000555233 CRY2Q49AN0 593 aa7.9□□□□□ -1.14
PRKCH-214ENST00000555233 DNAAF4Q8WXU2 420 aa7.9□□□□□ -1.14
PRKCH-214ENST00000555233 CCDC97Q96F63 343 aaPredicted RBP7.9□□□□□ -1.14
PRKCH-214ENST00000555233 ATP5J2-PTCD1G3V325 749 aa7.89□□□□□ -1.15
PRKCH-214ENST00000555233 H7C1W4 665 aa7.89□□□□□ -1.15
PRKCH-214ENST00000555233 GPTP24298 496 aa7.89□□□□□ -1.15
PRKCH-214ENST00000555233 EPHA10Q5JZY3 1008 aa7.89□□□□□ -1.15
PRKCH-214ENST00000555233 SLC10A5Q5PT55 438 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms