RNA–Protein interactions for RNA: ENST00000555225.5

SDR39U1-210, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-210ENST00000555225 UBE3BQ7Z3V4 1068 aa23.81■■□□□ 1.4
SDR39U1-210ENST00000555225 CRAMP1Q96RY5 1269 aa23.81■■□□□ 1.4
SDR39U1-210ENST00000555225 RBM46Q8TBY0 533 aaKnown RBP23.8■■□□□ 1.4
SDR39U1-210ENST00000555225 JARID2Q92833 1246 aaPredicted RBP23.8■■□□□ 1.4
SDR39U1-210ENST00000555225 DLEC1Q9Y238 1755 aa23.79■■□□□ 1.4
SDR39U1-210ENST00000555225 TRIM27P14373 513 aa23.79■■□□□ 1.4
SDR39U1-210ENST00000555225 C3orf67Q6ZVT6 689 aa23.79■■□□□ 1.4
SDR39U1-210ENST00000555225 CASP7P55210 303 aa23.78■■□□□ 1.4
SDR39U1-210ENST00000555225 DDX46Q7L014 1031 aaKnown RBP23.78■■□□□ 1.4
SDR39U1-210ENST00000555225 PLA2G12BQ9BX93 195 aa23.78■■□□□ 1.4
SDR39U1-210ENST00000555225 ABCC4O15439 1325 aa23.78■■□□□ 1.4
SDR39U1-210ENST00000555225 MS4A1P11836 297 aa23.77■■□□□ 1.4
SDR39U1-210ENST00000555225 CCDC152Q4G0S7 254 aa23.77■■□□□ 1.4
SDR39U1-210ENST00000555225 INTS3Q68E01 1043 aaKnown RBP23.77■■□□□ 1.4
SDR39U1-210ENST00000555225 UTYO14607 1347 aa23.77■■□□□ 1.4
SDR39U1-210ENST00000555225 COL11A2P13942 1736 aaPredicted RBP23.76■■□□□ 1.39
SDR39U1-210ENST00000555225 TIAM2Q8IVF5 1701 aa23.76■■□□□ 1.39
SDR39U1-210ENST00000555225 PRPF40BQ6NWY9 871 aaKnown RBP23.76■■□□□ 1.39
SDR39U1-210ENST00000555225 RNF181Q9P0P0 153 aa23.76■■□□□ 1.39
SDR39U1-210ENST00000555225 CTSWP56202 376 aa23.75■■□□□ 1.39
SDR39U1-210ENST00000555225 SOGA3Q5TF21 947 aa23.75■■□□□ 1.39
SDR39U1-210ENST00000555225 HDAC5Q9UQL6 1122 aa23.75■■□□□ 1.39
SDR39U1-210ENST00000555225 DDX60Q8IY21 1712 aaKnown RBP23.74■■□□□ 1.39
SDR39U1-210ENST00000555225 BBOX1O75936 387 aa23.74■■□□□ 1.39
SDR39U1-210ENST00000555225 FTSJ3Q8IY81 847 aaKnown RBP23.74■■□□□ 1.39
SDR39U1-210ENST00000555225 DZIP1LQ8IYY4 767 aaKnown RBP23.74■■□□□ 1.39
SDR39U1-210ENST00000555225 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.74■■□□□ 1.39
SDR39U1-210ENST00000555225 USP44Q9H0E7 712 aa23.74■■□□□ 1.39
SDR39U1-210ENST00000555225 LAMB2P55268 1798 aa23.73■■□□□ 1.39
SDR39U1-210ENST00000555225 NBPF7P0C2Y1 421 aaPredicted RBP23.73■■□□□ 1.39
SDR39U1-210ENST00000555225 TTLL11Q8NHH1 800 aa23.73■■□□□ 1.39
SDR39U1-210ENST00000555225 CLUAP1Q96AJ1 413 aa23.73■■□□□ 1.39
SDR39U1-210ENST00000555225 KLRG1Q96E93 195 aa23.73■■□□□ 1.39
SDR39U1-210ENST00000555225 GRAPQ13588 217 aa23.72■■□□□ 1.39
SDR39U1-210ENST00000555225 TMC4Q7Z404 712 aa23.72■■□□□ 1.39
SDR39U1-210ENST00000555225 GRAPLQ8TC17 118 aaPredicted RBP23.72■■□□□ 1.39
SDR39U1-210ENST00000555225 TMX4Q9H1E5 349 aaPredicted RBP23.72■■□□□ 1.39
SDR39U1-210ENST00000555225 PCNTO95613 3336 aa23.71■■□□□ 1.39
SDR39U1-210ENST00000555225 KDM2BQ8NHM5 1336 aa23.71■■□□□ 1.39
SDR39U1-210ENST00000555225 C21orf2O43822 256 aa23.71■■□□□ 1.39
SDR39U1-210ENST00000555225 CSF1RP07333 972 aa23.71■■□□□ 1.39
SDR39U1-210ENST00000555225 RASSF7Q02833 373 aa23.71■■□□□ 1.39
SDR39U1-210ENST00000555225 CC2D2BQ6DHV5 1058 aa23.71■■□□□ 1.39
SDR39U1-210ENST00000555225 C16orf71Q8IYS4 520 aaPredicted RBP23.71■■□□□ 1.39
SDR39U1-210ENST00000555225 JMYQ8N9B5 988 aa23.71■■□□□ 1.39
SDR39U1-210ENST00000555225 RTL9Q8NET4 1388 aa23.7■■□□□ 1.38
SDR39U1-210ENST00000555225 FSTL1Q12841 308 aa23.7■■□□□ 1.38
SDR39U1-210ENST00000555225 GRIPAP1Q4V328 841 aa23.7■■□□□ 1.38
SDR39U1-210ENST00000555225 C7orf43Q8WVR3 580 aa23.7■■□□□ 1.38
SDR39U1-210ENST00000555225 TNNQ9UQP3 1299 aa23.7■■□□□ 1.38
SDR39U1-210ENST00000555225 PPEF1O14829 653 aaPredicted RBP23.69■■□□□ 1.38
SDR39U1-210ENST00000555225 FOXO4P98177 505 aa23.69■■□□□ 1.38
SDR39U1-210ENST00000555225 RRAGCQ9HB90 399 aa23.69■■□□□ 1.38
SDR39U1-210ENST00000555225 GNAI3P08754 354 aa23.68■■□□□ 1.38
SDR39U1-210ENST00000555225 UBTFL1P0CB47 393 aaPredicted RBP23.68■■□□□ 1.38
SDR39U1-210ENST00000555225 PRELPP51888 382 aa23.68■■□□□ 1.38
SDR39U1-210ENST00000555225 RPS8P62241 208 aaKnown RBP23.68■■□□□ 1.38
SDR39U1-210ENST00000555225 COL13A1Q5TAT6 717 aaPredicted RBP23.68■■□□□ 1.38
SDR39U1-210ENST00000555225 TMEM57Q8N5G2 664 aa23.68■■□□□ 1.38
SDR39U1-210ENST00000555225 CDC5LQ99459 802 aaKnown RBP23.68■■□□□ 1.38
SDR39U1-210ENST00000555225 ZNF219Q9P2Y4 722 aaPredicted RBP23.68■■□□□ 1.38
SDR39U1-210ENST00000555225 CCDC93Q567U6 631 aa23.67■■□□□ 1.38
SDR39U1-210ENST00000555225 SP8Q8IXZ3 490 aa23.67■■□□□ 1.38
SDR39U1-210ENST00000555225 RTKN2Q8IZC4 609 aa23.67■■□□□ 1.38
SDR39U1-210ENST00000555225 SUCLG2Q96I99 432 aa23.67■■□□□ 1.38
SDR39U1-210ENST00000555225 CCDC85AQ96PX6 553 aaPredicted RBP23.67■■□□□ 1.38
SDR39U1-210ENST00000555225 GREM2Q9H772 168 aa23.67■■□□□ 1.38
SDR39U1-210ENST00000555225 ATP6V0A2Q9Y487 856 aa23.67■■□□□ 1.38
SDR39U1-210ENST00000555225 LMBR1LQ6UX01 489 aa23.66■■□□□ 1.38
SDR39U1-210ENST00000555225 CELF1Q92879 486 aaKnown RBP23.66■■□□□ 1.38
SDR39U1-210ENST00000555225 SEC31BQ9NQW1 1179 aa23.66■■□□□ 1.38
SDR39U1-210ENST00000555225 SLX4Q8IY92 1834 aa23.66■■□□□ 1.38
SDR39U1-210ENST00000555225 PDE3AQ14432 1141 aa23.65■■□□□ 1.38
SDR39U1-210ENST00000555225 EPHA10Q5JZY3 1008 aa23.65■■□□□ 1.38
SDR39U1-210ENST00000555225 ANKRD18AQ8IVF6 992 aa23.65■■□□□ 1.38
SDR39U1-210ENST00000555225 KAZALD1Q96I82 304 aa23.65■■□□□ 1.38
SDR39U1-210ENST00000555225 CCDC88AQ3V6T2 1871 aa23.64■■□□□ 1.38
SDR39U1-210ENST00000555225 ANKRD18BA2A2Z9 1011 aa23.64■■□□□ 1.37
SDR39U1-210ENST00000555225 ITGA6P23229 1130 aa23.64■■□□□ 1.37
SDR39U1-210ENST00000555225 IFIT5Q13325 482 aaKnown RBP23.64■■□□□ 1.37
SDR39U1-210ENST00000555225 RABL6Q3YEC7 729 aaPredicted RBP23.64■■□□□ 1.37
SDR39U1-210ENST00000555225 ITPRIPQ8IWB1 547 aa23.64■■□□□ 1.37
SDR39U1-210ENST00000555225 CHMP3Q9Y3E7 222 aa23.64■■□□□ 1.37
SDR39U1-210ENST00000555225 PLIN1O60240 522 aa23.63■■□□□ 1.37
SDR39U1-210ENST00000555225 RLBP1P12271 317 aa23.63■■□□□ 1.37
SDR39U1-210ENST00000555225 CCDC57Q2TAC2 916 aa23.63■■□□□ 1.37
SDR39U1-210ENST00000555225 PANK1Q8TE04 598 aa23.63■■□□□ 1.37
SDR39U1-210ENST00000555225 MEIS3Q99687 375 aa23.63■■□□□ 1.37
SDR39U1-210ENST00000555225 BICC1Q9H694 974 aaKnown RBP23.63■■□□□ 1.37
SDR39U1-210ENST00000555225 IGHMBP2P38935 993 aaKnown RBP23.62■■□□□ 1.37
SDR39U1-210ENST00000555225 FAM161AQ3B820 660 aa23.62■■□□□ 1.37
SDR39U1-210ENST00000555225 MYH3P11055 1940 aa23.62■■□□□ 1.37
SDR39U1-210ENST00000555225 LTBP3Q9NS15 1303 aa23.61■■□□□ 1.37
SDR39U1-210ENST00000555225 ZC3H4Q9UPT8 1303 aaKnown RBP23.61■■□□□ 1.37
SDR39U1-210ENST00000555225 SMC1BQ8NDV3 1235 aa23.61■■□□□ 1.37
SDR39U1-210ENST00000555225 CHMP4BQ9H444 224 aaKnown RBP23.61■■□□□ 1.37
SDR39U1-210ENST00000555225 BSDC1Q9NW68 430 aaPredicted RBP23.61■■□□□ 1.37
SDR39U1-210ENST00000555225 GNAI2P04899 355 aa23.6■■□□□ 1.37
SDR39U1-210ENST00000555225 ANKRD44Q8N8A2 993 aa23.6■■□□□ 1.37
SDR39U1-210ENST00000555225 PSMD1Q99460 953 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms