RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 LAMB2P55268 1798 aa11.73□□□□□ -0.53
PRKCH-213ENST00000555185 CNGB1Q14028 1251 aaPredicted RBP11.73□□□□□ -0.53
PRKCH-213ENST00000555185 GRIPAP1Q4V328 841 aa11.73□□□□□ -0.53
PRKCH-213ENST00000555185 DPP8Q6V1X1 898 aaPredicted RBP11.73□□□□□ -0.53
PRKCH-213ENST00000555185 MCM10Q7L590 875 aa11.73□□□□□ -0.53
PRKCH-213ENST00000555185 RASAL3Q86YV0 1011 aa11.73□□□□□ -0.53
PRKCH-213ENST00000555185 CDHR2Q9BYE9 1310 aa11.73□□□□□ -0.53
PRKCH-213ENST00000555185 ZBTB3Q9H5J0 574 aa11.73□□□□□ -0.53
PRKCH-213ENST00000555185 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
PRKCH-213ENST00000555185 HTTP42858 3142 aa11.72□□□□□ -0.53
PRKCH-213ENST00000555185 COL3A1P02461 1466 aaPredicted RBP11.72□□□□□ -0.53
PRKCH-213ENST00000555185 NTSR2O95665 410 aa11.72□□□□□ -0.53
PRKCH-213ENST00000555185 KIAA2012Q0VF49 1180 aa11.72□□□□□ -0.53
PRKCH-213ENST00000555185 DCTN1Q14203 1278 aa11.72□□□□□ -0.53
PRKCH-213ENST00000555185 TNIP1Q15025 636 aa11.72□□□□□ -0.53
PRKCH-213ENST00000555185 RTFDC1Q9BY42 306 aaPredicted RBP11.72□□□□□ -0.53
PRKCH-213ENST00000555185 TMX4Q9H1E5 349 aaPredicted RBP11.72□□□□□ -0.53
PRKCH-213ENST00000555185 MIS18AQ9NYP9 233 aa11.72□□□□□ -0.53
PRKCH-213ENST00000555185 KIAA0100Q14667 2235 aaKnown RBP11.72□□□□□ -0.53
PRKCH-213ENST00000555185 DUOX1Q9NRD9 1551 aa11.71□□□□□ -0.53
PRKCH-213ENST00000555185 MAP3K15Q6ZN16 1313 aa11.71□□□□□ -0.53
PRKCH-213ENST00000555185 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
PRKCH-213ENST00000555185 PSMD14O00487 310 aa11.71□□□□□ -0.53
PRKCH-213ENST00000555185 RGL2O15211 777 aa11.71□□□□□ -0.53
PRKCH-213ENST00000555185 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.53
PRKCH-213ENST00000555185 CC2D1BQ5T0F9 858 aaKnown RBP11.71□□□□□ -0.53
PRKCH-213ENST00000555185 MOB2Q70IA6 237 aa11.71□□□□□ -0.53
PRKCH-213ENST00000555185 MPNDQ8N594 471 aa11.71□□□□□ -0.53
PRKCH-213ENST00000555185 SUPT20HQ8NEM7 779 aa11.71□□□□□ -0.53
PRKCH-213ENST00000555185 DCPSQ96C86 337 aaKnown RBP11.71□□□□□ -0.53
PRKCH-213ENST00000555185 SCAF8Q9UPN6 1271 aaKnown RBP11.71□□□□□ -0.53
PRKCH-213ENST00000555185 TRIOBPQ9H2D6 2365 aa11.71□□□□□ -0.54
PRKCH-213ENST00000555185 MYL6BP14649 208 aa11.7□□□□□ -0.54
PRKCH-213ENST00000555185 PKN2Q16513 984 aaKnown RBP11.7□□□□□ -0.54
PRKCH-213ENST00000555185 CDCA5Q96FF9 252 aa11.7□□□□□ -0.54
PRKCH-213ENST00000555185 VPS33BQ9H267 617 aa11.7□□□□□ -0.54
PRKCH-213ENST00000555185 DBNDD1Q9H9R9 158 aa11.7□□□□□ -0.54
PRKCH-213ENST00000555185 KCNQ5Q9NR82 932 aa11.7□□□□□ -0.54
PRKCH-213ENST00000555185 GGA3Q9NZ52 723 aa11.7□□□□□ -0.54
PRKCH-213ENST00000555185 RRP7AQ9Y3A4 280 aaKnown RBP11.7□□□□□ -0.54
PRKCH-213ENST00000555185 PAPPA2Q9BXP8 1791 aa11.69□□□□□ -0.54
PRKCH-213ENST00000555185 PRKAR2BP31323 418 aa11.69□□□□□ -0.54
PRKCH-213ENST00000555185 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
PRKCH-213ENST00000555185 FBXO46Q6PJ61 603 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-213ENST00000555185 ZNF428Q96B54 188 aa11.69□□□□□ -0.54
PRKCH-213ENST00000555185 NLRP3Q96P20 1036 aa11.69□□□□□ -0.54
PRKCH-213ENST00000555185 R3HDMLQ9H3Y0 253 aa11.69□□□□□ -0.54
PRKCH-213ENST00000555185 CEP290O15078 2479 aa11.69□□□□□ -0.54
PRKCH-213ENST00000555185 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
PRKCH-213ENST00000555185 ERVV-1B6SEH8 477 aa11.68□□□□□ -0.54
PRKCH-213ENST00000555185 GPR25O00155 361 aa11.68□□□□□ -0.54
PRKCH-213ENST00000555185 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
PRKCH-213ENST00000555185 KIF6Q6ZMV9 814 aa11.68□□□□□ -0.54
PRKCH-213ENST00000555185 ZNF34Q8IZ26 560 aa11.68□□□□□ -0.54
PRKCH-213ENST00000555185 SCN9AQ15858 1988 aa11.68□□□□□ -0.54
PRKCH-213ENST00000555185 HCLS1P14317 486 aaPredicted RBP11.67□□□□□ -0.54
PRKCH-213ENST00000555185 KIF4BQ2VIQ3 1234 aa11.67□□□□□ -0.54
PRKCH-213ENST00000555185 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
PRKCH-213ENST00000555185 SP8Q8IXZ3 490 aa11.67□□□□□ -0.54
PRKCH-213ENST00000555185 COLQQ9Y215 455 aaPredicted RBP11.67□□□□□ -0.54
PRKCH-213ENST00000555185 RTL9Q8NET4 1388 aa11.67□□□□□ -0.54
PRKCH-213ENST00000555185 UBE2Q2LH0YL09 131 aa11.66□□□□□ -0.54
PRKCH-213ENST00000555185 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
PRKCH-213ENST00000555185 PRAMEF18Q5VWM3 479 aa11.66□□□□□ -0.54
PRKCH-213ENST00000555185 RTF1Q92541 710 aaKnown RBP11.66□□□□□ -0.54
PRKCH-213ENST00000555185 DPF2Q92785 391 aa11.66□□□□□ -0.54
PRKCH-213ENST00000555185 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
PRKCH-213ENST00000555185 ANKRD36CQ5JPF3 1778 aa11.66□□□□□ -0.54
PRKCH-213ENST00000555185 COL4A1P02462 1669 aa11.65□□□□□ -0.54
PRKCH-213ENST00000555185 DLL1O00548 723 aa11.65□□□□□ -0.54
PRKCH-213ENST00000555185 ANGEL2Q5VTE6 544 aaKnown RBP11.65□□□□□ -0.54
PRKCH-213ENST00000555185 PPP1R42Q7Z4L9 355 aa11.65□□□□□ -0.54
PRKCH-213ENST00000555185 THUMPD2Q9BTF0 503 aaKnown RBP11.65□□□□□ -0.54
PRKCH-213ENST00000555185 LRRC37AA6NMS7 1700 aa11.64□□□□□ -0.55
PRKCH-213ENST00000555185 ECE2O60344 883 aa11.64□□□□□ -0.55
PRKCH-213ENST00000555185 BBOX1O75936 387 aa11.64□□□□□ -0.55
PRKCH-213ENST00000555185 EN2P19622 333 aaPredicted RBP11.64□□□□□ -0.55
PRKCH-213ENST00000555185 EIF4G2P78344 907 aaKnown RBP eCLIP11.64□□□□□ -0.55
PRKCH-213ENST00000555185 WASHC4Q2M389 1173 aa11.64□□□□□ -0.55
PRKCH-213ENST00000555185 REM2Q8IYK8 340 aaPredicted RBP11.64□□□□□ -0.55
PRKCH-213ENST00000555185 UTP14AQ9BVJ6 771 aaKnown RBP11.64□□□□□ -0.55
PRKCH-213ENST00000555185 FKTNO75072 461 aa11.63□□□□□ -0.55
PRKCH-213ENST00000555185 GRAPQ13588 217 aa11.63□□□□□ -0.55
PRKCH-213ENST00000555185 SLC10A5Q5PT55 438 aa11.63□□□□□ -0.55
PRKCH-213ENST00000555185 GIGYF2Q6Y7W6 1299 aaKnown RBP11.63□□□□□ -0.55
PRKCH-213ENST00000555185 GRAPLQ8TC17 118 aaPredicted RBP11.63□□□□□ -0.55
PRKCH-213ENST00000555185 TRIM17Q9Y577 477 aa11.63□□□□□ -0.55
PRKCH-213ENST00000555185 KDM3BQ7LBC6 1761 aa11.63□□□□□ -0.55
PRKCH-213ENST00000555185 RBBP6Q7Z6E9 1792 aaKnown RBP11.62□□□□□ -0.55
PRKCH-213ENST00000555185 C6orf229H3BNL8 230 aa11.62□□□□□ -0.55
PRKCH-213ENST00000555185 ANXA1P04083 346 aa11.62□□□□□ -0.55
PRKCH-213ENST00000555185 SCARF1Q14162 830 aa11.62□□□□□ -0.55
PRKCH-213ENST00000555185 TAF7Q15545 349 aaPredicted RBP11.62□□□□□ -0.55
PRKCH-213ENST00000555185 DDX46Q7L014 1031 aaKnown RBP11.62□□□□□ -0.55
PRKCH-213ENST00000555185 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.62□□□□□ -0.55
PRKCH-213ENST00000555185 POLLQ9UGP5 575 aa11.62□□□□□ -0.55
PRKCH-213ENST00000555185 NSFL1CQ9UNZ2 370 aaKnown RBP11.62□□□□□ -0.55
PRKCH-213ENST00000555185 DDX60Q8IY21 1712 aaKnown RBP11.61□□□□□ -0.55
PRKCH-213ENST00000555185 RPS12P25398 132 aaKnown RBP11.61□□□□□ -0.55
PRKCH-213ENST00000555185 TM4SF4P48230 202 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms