RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 BCL2L13Q9BXK5 485 aa20.21■□□□□ 0.83
NEDD1-207ENST00000555114 HSPA8P11142 646 aaKnown RBP20.2■□□□□ 0.82
NEDD1-207ENST00000555114 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
NEDD1-207ENST00000555114 SLC51AQ86UW1 340 aa20.2■□□□□ 0.82
NEDD1-207ENST00000555114 LAS1LQ9Y4W2 734 aaKnown RBP20.2■□□□□ 0.82
NEDD1-207ENST00000555114 ANKRD36CQ5JPF3 1778 aa20.19■□□□□ 0.82
NEDD1-207ENST00000555114 GMPSP49915 693 aaPredicted RBP20.19■□□□□ 0.82
NEDD1-207ENST00000555114 GRM1Q13255 1194 aa20.19■□□□□ 0.82
NEDD1-207ENST00000555114 WDR43Q15061 677 aaKnown RBP eCLIP20.19■□□□□ 0.82
NEDD1-207ENST00000555114 TLL2Q9Y6L7 1015 aa20.19■□□□□ 0.82
NEDD1-207ENST00000555114 MYBBP1AQ9BQG0 1328 aaKnown RBP20.19■□□□□ 0.82
NEDD1-207ENST00000555114 TRAF5O00463 557 aa20.18■□□□□ 0.82
NEDD1-207ENST00000555114 CHL1O00533 1208 aa20.18■□□□□ 0.82
NEDD1-207ENST00000555114 HOXB7P09629 217 aa20.18■□□□□ 0.82
NEDD1-207ENST00000555114 HDGFL1Q5TGJ6 251 aa20.18■□□□□ 0.82
NEDD1-207ENST00000555114 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
NEDD1-207ENST00000555114 GPR101Q96P66 508 aaPredicted RBP20.18■□□□□ 0.82
NEDD1-207ENST00000555114 CST9Q5W186 159 aa20.17■□□□□ 0.82
NEDD1-207ENST00000555114 CYP4F22Q6NT55 531 aa20.17■□□□□ 0.82
NEDD1-207ENST00000555114 CCDC146Q8IYE0 955 aa20.17■□□□□ 0.82
NEDD1-207ENST00000555114 PLBD2Q8NHP8 589 aa20.17■□□□□ 0.82
NEDD1-207ENST00000555114 ZC3H15Q8WU90 426 aaKnown RBP20.17■□□□□ 0.82
NEDD1-207ENST00000555114 CHPF2Q9P2E5 772 aa20.17■□□□□ 0.82
NEDD1-207ENST00000555114 DBF4Q9UBU7 674 aaPredicted RBP20.17■□□□□ 0.82
NEDD1-207ENST00000555114 RAD17O75943 681 aa20.16■□□□□ 0.82
NEDD1-207ENST00000555114 CELF2O95319 508 aaKnown RBP20.16■□□□□ 0.82
NEDD1-207ENST00000555114 FMR1Q06787 632 aaKnown RBP eCLIP20.16■□□□□ 0.82
NEDD1-207ENST00000555114 TRPM7Q96QT4 1865 aa20.16■□□□□ 0.82
NEDD1-207ENST00000555114 H7C1D1 291 aa20.15■□□□□ 0.82
NEDD1-207ENST00000555114 MAP2K2P36507 400 aa20.15■□□□□ 0.82
NEDD1-207ENST00000555114 ANKRD13DQ6ZTN6 518 aa20.15■□□□□ 0.82
NEDD1-207ENST00000555114 LAMB2P55268 1798 aa20.14■□□□□ 0.81
NEDD1-207ENST00000555114 THSD7BQ9C0I4 1608 aa20.14■□□□□ 0.81
NEDD1-207ENST00000555114 KRT24Q2M2I5 525 aa20.14■□□□□ 0.81
NEDD1-207ENST00000555114 CDC37L1Q7L3B6 337 aa20.14■□□□□ 0.81
NEDD1-207ENST00000555114 HYPKQ9NX55 129 aa20.14■□□□□ 0.81
NEDD1-207ENST00000555114 PGAP2Q9UHJ9 254 aa20.14■□□□□ 0.81
NEDD1-207ENST00000555114 WASHC4Q2M389 1173 aa20.13■□□□□ 0.81
NEDD1-207ENST00000555114 SAPCD2Q86UD0 394 aa20.13■□□□□ 0.81
NEDD1-207ENST00000555114 HHIPL1Q96JK4 782 aa20.13■□□□□ 0.81
NEDD1-207ENST00000555114 GLIS2Q9BZE0 524 aaPredicted RBP20.13■□□□□ 0.81
NEDD1-207ENST00000555114 CNOT7Q9UIV1 285 aaKnown RBP20.13■□□□□ 0.81
NEDD1-207ENST00000555114 CA12O43570 354 aa20.12■□□□□ 0.81
NEDD1-207ENST00000555114 HSP90B1P14625 803 aaKnown RBP20.12■□□□□ 0.81
NEDD1-207ENST00000555114 SF3B3Q15393 1217 aaKnown RBP20.12■□□□□ 0.81
NEDD1-207ENST00000555114 EYA3Q99504 573 aa20.12■□□□□ 0.81
NEDD1-207ENST00000555114 ISCA1Q9BUE6 129 aa20.12■□□□□ 0.81
NEDD1-207ENST00000555114 ZNF408Q9H9D4 720 aa20.12■□□□□ 0.81
NEDD1-207ENST00000555114 NSFL1CQ9UNZ2 370 aaKnown RBP20.12■□□□□ 0.81
NEDD1-207ENST00000555114 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
NEDD1-207ENST00000555114 MICALL2Q8IY33 904 aa20.11■□□□□ 0.81
NEDD1-207ENST00000555114 FAM89AQ96GI7 184 aa20.11■□□□□ 0.81
NEDD1-207ENST00000555114 ABHD8Q96I13 439 aa20.11■□□□□ 0.81
NEDD1-207ENST00000555114 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
NEDD1-207ENST00000555114 YDJCA8MPS7 323 aa20.1■□□□□ 0.81
NEDD1-207ENST00000555114 C6orf229H3BNL8 230 aa20.1■□□□□ 0.81
NEDD1-207ENST00000555114 DDX10Q13206 875 aaKnown RBP20.1■□□□□ 0.81
NEDD1-207ENST00000555114 DPF2Q92785 391 aa20.1■□□□□ 0.81
NEDD1-207ENST00000555114 ATP5J2-PTCD1G3V325 749 aa20.09■□□□□ 0.81
NEDD1-207ENST00000555114 GOLGA2Q08379 1002 aa20.09■□□□□ 0.81
NEDD1-207ENST00000555114 DUSP27Q5VZP5 1158 aa20.09■□□□□ 0.81
NEDD1-207ENST00000555114 TRPM4Q8TD43 1214 aa20.09■□□□□ 0.81
NEDD1-207ENST00000555114 LRRC37AA6NMS7 1700 aa20.08■□□□□ 0.81
NEDD1-207ENST00000555114 IRS4O14654 1257 aaPredicted RBP20.08■□□□□ 0.81
NEDD1-207ENST00000555114 AOC2O75106 756 aa20.08■□□□□ 0.81
NEDD1-207ENST00000555114 RPS12P25398 132 aaKnown RBP20.08■□□□□ 0.81
NEDD1-207ENST00000555114 HIRAP54198 1017 aaPredicted RBP20.08■□□□□ 0.81
NEDD1-207ENST00000555114 CALD1Q05682 793 aaKnown RBP20.08■□□□□ 0.81
NEDD1-207ENST00000555114 TRIM28Q13263 835 aaKnown RBP20.08■□□□□ 0.81
NEDD1-207ENST00000555114 RIC3Q7Z5B4 369 aa20.08■□□□□ 0.81
NEDD1-207ENST00000555114 CELF1Q92879 486 aaKnown RBP20.08■□□□□ 0.81
NEDD1-207ENST00000555114 ZNF428Q96B54 188 aa20.08■□□□□ 0.81
NEDD1-207ENST00000555114 DBNDD1Q9H9R9 158 aa20.08■□□□□ 0.81
NEDD1-207ENST00000555114 PSMD14O00487 310 aa20.07■□□□□ 0.8
NEDD1-207ENST00000555114 RIMBP2O15034 1052 aa20.07■□□□□ 0.8
NEDD1-207ENST00000555114 BRPF1P55201 1214 aaPredicted RBP20.07■□□□□ 0.8
NEDD1-207ENST00000555114 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
NEDD1-207ENST00000555114 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
NEDD1-207ENST00000555114 DUOX1Q9NRD9 1551 aa20.07■□□□□ 0.8
NEDD1-207ENST00000555114 G3V3G9 751 aa20.06■□□□□ 0.8
NEDD1-207ENST00000555114 RPS8P62241 208 aaKnown RBP20.06■□□□□ 0.8
NEDD1-207ENST00000555114 GPSM2P81274 684 aa20.06■□□□□ 0.8
NEDD1-207ENST00000555114 RTL5Q5HYW3 569 aaPredicted RBP20.06■□□□□ 0.8
NEDD1-207ENST00000555114 DCAF8Q5TAQ9 597 aa20.06■□□□□ 0.8
NEDD1-207ENST00000555114 DDX60Q8IY21 1712 aaKnown RBP20.06■□□□□ 0.8
NEDD1-207ENST00000555114 CHMP4AQ9BY43 222 aa20.06■□□□□ 0.8
NEDD1-207ENST00000555114 ECE2O60344 883 aa20.05■□□□□ 0.8
NEDD1-207ENST00000555114 NOGQ13253 232 aa20.05■□□□□ 0.8
NEDD1-207ENST00000555114 USP48Q86UV5 1035 aa20.05■□□□□ 0.8
NEDD1-207ENST00000555114 ZBTB38Q8NAP3 1195 aaPredicted RBP20.05■□□□□ 0.8
NEDD1-207ENST00000555114 ZC3H12CQ9C0D7 883 aaKnown RBP20.05■□□□□ 0.8
NEDD1-207ENST00000555114 MBIPQ9NS73 344 aa20.05■□□□□ 0.8
NEDD1-207ENST00000555114 POLLQ9UGP5 575 aa20.05■□□□□ 0.8
NEDD1-207ENST00000555114 HUNKP57058 714 aa20.04■□□□□ 0.8
NEDD1-207ENST00000555114 KRT26Q7Z3Y9 468 aa20.04■□□□□ 0.8
NEDD1-207ENST00000555114 DCPSQ96C86 337 aaKnown RBP20.04■□□□□ 0.8
NEDD1-207ENST00000555114 TAF1P21675 1872 aa20.03■□□□□ 0.8
NEDD1-207ENST00000555114 SHTN1A0MZ66 631 aa20.03■□□□□ 0.8
NEDD1-207ENST00000555114 GNAI1P63096 354 aa20.03■□□□□ 0.8
NEDD1-207ENST00000555114 TBC1D10BQ4KMP7 808 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms