RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
PSMC6-207ENST00000554952 EAPPQ56P03 285 aaPredicted RBP15.34■□□□□ 0.05
PSMC6-207ENST00000554952 RTL5Q5HYW3 569 aaPredicted RBP15.34■□□□□ 0.05
PSMC6-207ENST00000554952 SP8Q8IXZ3 490 aa15.34■□□□□ 0.05
PSMC6-207ENST00000554952 PIP4P2Q8N4L2 257 aa15.34■□□□□ 0.05
PSMC6-207ENST00000554952 HACL1Q9UJ83 578 aa15.34■□□□□ 0.05
PSMC6-207ENST00000554952 CLEC11AQ9Y240 323 aa15.34■□□□□ 0.05
PSMC6-207ENST00000554952 GJA3Q9Y6H8 435 aa15.34■□□□□ 0.05
PSMC6-207ENST00000554952 GPC2Q8N158 579 aa15.33■□□□□ 0.04
PSMC6-207ENST00000554952 CHMP4AQ9BY43 222 aa15.33■□□□□ 0.04
PSMC6-207ENST00000554952 SNED1Q8TER0 1413 aa15.33■□□□□ 0.04
PSMC6-207ENST00000554952 PPIP5K2O43314 1243 aa15.32■□□□□ 0.04
PSMC6-207ENST00000554952 EPHX2P34913 555 aa15.32■□□□□ 0.04
PSMC6-207ENST00000554952 TRIM28Q13263 835 aaKnown RBP15.32■□□□□ 0.04
PSMC6-207ENST00000554952 GRAPQ13588 217 aa15.32■□□□□ 0.04
PSMC6-207ENST00000554952 CCDC30Q5VVM6 783 aa15.32■□□□□ 0.04
PSMC6-207ENST00000554952 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
PSMC6-207ENST00000554952 LDHDQ86WU2 507 aa15.32■□□□□ 0.04
PSMC6-207ENST00000554952 WWC1Q8IX03 1113 aa15.32■□□□□ 0.04
PSMC6-207ENST00000554952 NIM1KQ8IY84 436 aa15.32■□□□□ 0.04
PSMC6-207ENST00000554952 MPNDQ8N594 471 aa15.32■□□□□ 0.04
PSMC6-207ENST00000554952 TSPYL6Q8N831 410 aa15.32■□□□□ 0.04
PSMC6-207ENST00000554952 GRAPLQ8TC17 118 aaPredicted RBP15.32■□□□□ 0.04
PSMC6-207ENST00000554952 TSR2Q969E8 191 aaKnown RBP15.32■□□□□ 0.04
PSMC6-207ENST00000554952 ANKRD36CQ5JPF3 1778 aa15.31■□□□□ 0.04
PSMC6-207ENST00000554952 AOC3Q16853 763 aa15.31■□□□□ 0.04
PSMC6-207ENST00000554952 SUPT20HQ8NEM7 779 aa15.31■□□□□ 0.04
PSMC6-207ENST00000554952 IRS4O14654 1257 aaPredicted RBP15.3■□□□□ 0.04
PSMC6-207ENST00000554952 SCN4AP35499 1836 aa15.3■□□□□ 0.04
PSMC6-207ENST00000554952 SF3B3Q15393 1217 aaKnown RBP15.3■□□□□ 0.04
PSMC6-207ENST00000554952 CCDC27Q2M243 656 aa15.3■□□□□ 0.04
PSMC6-207ENST00000554952 PNMA8AQ86V59 439 aaPredicted RBP15.3■□□□□ 0.04
PSMC6-207ENST00000554952 MYD88Q99836 296 aa15.3■□□□□ 0.04
PSMC6-207ENST00000554952 VPS33BQ9H267 617 aa15.3■□□□□ 0.04
PSMC6-207ENST00000554952 SALL2Q9Y467 1007 aaPredicted RBP15.3■□□□□ 0.04
PSMC6-207ENST00000554952 DDX58O95786 925 aaKnown RBP15.29■□□□□ 0.04
PSMC6-207ENST00000554952 LMOD1P29536 600 aaPredicted RBP15.29■□□□□ 0.04
PSMC6-207ENST00000554952 RTFDC1Q9BY42 306 aaPredicted RBP15.29■□□□□ 0.04
PSMC6-207ENST00000554952 TMC4Q7Z404 712 aa15.28■□□□□ 0.04
PSMC6-207ENST00000554952 JMYQ8N9B5 988 aa15.28■□□□□ 0.04
PSMC6-207ENST00000554952 ZBTB38Q8NAP3 1195 aaPredicted RBP15.28■□□□□ 0.04
PSMC6-207ENST00000554952 JARID2Q92833 1246 aaPredicted RBP15.28■□□□□ 0.04
PSMC6-207ENST00000554952 CELF1Q92879 486 aaKnown RBP15.28■□□□□ 0.04
PSMC6-207ENST00000554952 STK31Q9BXU1 1019 aa15.28■□□□□ 0.04
PSMC6-207ENST00000554952 ZNRF3Q9ULT6 936 aa15.28■□□□□ 0.04
PSMC6-207ENST00000554952 TAF1P21675 1872 aa15.28■□□□□ 0.04
PSMC6-207ENST00000554952 COL4A5P29400 1685 aa15.28■□□□□ 0.04
PSMC6-207ENST00000554952 LAMB2P55268 1798 aa15.27■□□□□ 0.04
PSMC6-207ENST00000554952 EPS15P42566 896 aa15.27■□□□□ 0.04
PSMC6-207ENST00000554952 TWISTNBQ3B726 338 aaPredicted RBP15.27■□□□□ 0.04
PSMC6-207ENST00000554952 CCDC191Q8NCU4 936 aa15.27■□□□□ 0.04
PSMC6-207ENST00000554952 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.04
PSMC6-207ENST00000554952 NSFL1CQ9UNZ2 370 aaKnown RBP15.27■□□□□ 0.04
PSMC6-207ENST00000554952 MAP3K2Q9Y2U5 619 aa15.27■□□□□ 0.04
PSMC6-207ENST00000554952 ITGBL1O95965 494 aaPredicted RBP15.26■□□□□ 0.03
PSMC6-207ENST00000554952 HSP90B1P14625 803 aaKnown RBP15.26■□□□□ 0.03
PSMC6-207ENST00000554952 RPS8P62241 208 aaKnown RBP15.26■□□□□ 0.03
PSMC6-207ENST00000554952 CXCL9Q07325 125 aa15.26■□□□□ 0.03
PSMC6-207ENST00000554952 KIAA2012Q0VF49 1180 aa15.26■□□□□ 0.03
PSMC6-207ENST00000554952 MAP1SQ66K74 1059 aaPredicted RBP15.26■□□□□ 0.03
PSMC6-207ENST00000554952 KSR2Q6VAB6 950 aa15.26■□□□□ 0.03
PSMC6-207ENST00000554952 CNTROBQ8N137 903 aa15.26■□□□□ 0.03
PSMC6-207ENST00000554952 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
PSMC6-207ENST00000554952 CWC25Q9NXE8 425 aaPredicted RBP15.26■□□□□ 0.03
PSMC6-207ENST00000554952 IL16Q14005 1332 aa15.25■□□□□ 0.03
PSMC6-207ENST00000554952 PASKQ96RG2 1323 aa15.25■□□□□ 0.03
PSMC6-207ENST00000554952 PI4KAP2A4QPH2 592 aa15.25■□□□□ 0.03
PSMC6-207ENST00000554952 PCCAP05165 728 aaPredicted RBP15.25■□□□□ 0.03
PSMC6-207ENST00000554952 SCNN1DP51172 638 aa15.25■□□□□ 0.03
PSMC6-207ENST00000554952 PI4KAP1Q8N8J0 262 aa15.25■□□□□ 0.03
PSMC6-207ENST00000554952 MKRN1Q9UHC7 482 aaKnown RBP15.25■□□□□ 0.03
PSMC6-207ENST00000554952 C6orf229H3BNL8 230 aa15.24■□□□□ 0.03
PSMC6-207ENST00000554952 RAD17O75943 681 aa15.24■□□□□ 0.03
PSMC6-207ENST00000554952 WASHC4Q2M389 1173 aa15.24■□□□□ 0.03
PSMC6-207ENST00000554952 CIAPIN1Q6FI81 312 aa15.24■□□□□ 0.03
PSMC6-207ENST00000554952 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
PSMC6-207ENST00000554952 CCDC85AQ96PX6 553 aaPredicted RBP15.24■□□□□ 0.03
PSMC6-207ENST00000554952 SEC31BQ9NQW1 1179 aa15.24■□□□□ 0.03
PSMC6-207ENST00000554952 TMEM88BA6NKF7 163 aa15.23■□□□□ 0.03
PSMC6-207ENST00000554952 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
PSMC6-207ENST00000554952 RIMBP2O15034 1052 aa15.23■□□□□ 0.03
PSMC6-207ENST00000554952 PDE8AO60658 829 aa15.23■□□□□ 0.03
PSMC6-207ENST00000554952 GPSM2P81274 684 aa15.23■□□□□ 0.03
PSMC6-207ENST00000554952 NEXNQ0ZGT2 675 aa15.23■□□□□ 0.03
PSMC6-207ENST00000554952 TNIP1Q15025 636 aa15.23■□□□□ 0.03
PSMC6-207ENST00000554952 G2E3Q7L622 706 aa15.23■□□□□ 0.03
PSMC6-207ENST00000554952 WDR63Q8IWG1 891 aa15.23■□□□□ 0.03
PSMC6-207ENST00000554952 BCL2L13Q9BXK5 485 aa15.23■□□□□ 0.03
PSMC6-207ENST00000554952 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
PSMC6-207ENST00000554952 GMPSP49915 693 aaPredicted RBP15.22■□□□□ 0.03
PSMC6-207ENST00000554952 CCDC152Q4G0S7 254 aa15.22■□□□□ 0.03
PSMC6-207ENST00000554952 IFFO2Q5TF58 517 aa15.22■□□□□ 0.03
PSMC6-207ENST00000554952 USP50Q70EL3 339 aaPredicted RBP15.22■□□□□ 0.03
PSMC6-207ENST00000554952 GPRC5DQ9NZD1 345 aa15.22■□□□□ 0.03
PSMC6-207ENST00000554952 POLLQ9UGP5 575 aa15.22■□□□□ 0.03
PSMC6-207ENST00000554952 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
PSMC6-207ENST00000554952 IGKV5-2P06315 115 aa15.21■□□□□ 0.03
PSMC6-207ENST00000554952 DBNDD1Q9H9R9 158 aa15.21■□□□□ 0.03
PSMC6-207ENST00000554952 ADARB2Q9NS39 739 aaKnown RBP15.21■□□□□ 0.03
PSMC6-207ENST00000554952 ANKIB1Q9P2G1 1089 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms