RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 ELOA3CA0A087WX78 387 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-214ENST00000554819 ELOA3DA6NLF2 546 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-214ENST00000554819 ADARB2-AS1A8MUL3 147 aa7.43□□□□□ -1.22
SCFD1-214ENST00000554819 ARHGEF15O94989 841 aa7.43□□□□□ -1.22
SCFD1-214ENST00000554819 MAP3K6O95382 1288 aa7.43□□□□□ -1.22
SCFD1-214ENST00000554819 TARSP26639 723 aaKnown RBP7.43□□□□□ -1.22
SCFD1-214ENST00000554819 ELOA3BQ3SY89 546 aa7.43□□□□□ -1.22
SCFD1-214ENST00000554819 C1orf229Q6ZS94 237 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-214ENST00000554819 KRT25Q7Z3Z0 450 aa7.43□□□□□ -1.22
SCFD1-214ENST00000554819 NLRP13Q86W25 1043 aa7.43□□□□□ -1.22
SCFD1-214ENST00000554819 FCHSD1Q86WN1 690 aa7.43□□□□□ -1.22
SCFD1-214ENST00000554819 ELOA3Q8NG57 546 aa7.43□□□□□ -1.22
SCFD1-214ENST00000554819 NUDT16Q96DE0 195 aaKnown RBP7.43□□□□□ -1.22
SCFD1-214ENST00000554819 PDGFAP04085 211 aa7.42□□□□□ -1.22
SCFD1-214ENST00000554819 UBE2OQ9C0C9 1292 aaKnown RBP7.42□□□□□ -1.22
SCFD1-214ENST00000554819 IGFLR1Q9H665 355 aa7.42□□□□□ -1.22
SCFD1-214ENST00000554819 SOWAHDA6NJG2 315 aa7.41□□□□□ -1.22
SCFD1-214ENST00000554819 AMPD1P23109 780 aa7.41□□□□□ -1.22
SCFD1-214ENST00000554819 EHHADHQ08426 723 aa7.41□□□□□ -1.22
SCFD1-214ENST00000554819 TRIP4Q15650 581 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-214ENST00000554819 PDE12Q6L8Q7 609 aaKnown RBP7.41□□□□□ -1.22
SCFD1-214ENST00000554819 AEBP1Q8IUX7 1158 aa7.41□□□□□ -1.22
SCFD1-214ENST00000554819 HOMEZQ8IX15 550 aa7.41□□□□□ -1.22
SCFD1-214ENST00000554819 BTBD6Q96KE9 485 aa7.41□□□□□ -1.22
SCFD1-214ENST00000554819 ZFATQ9P243 1243 aa7.41□□□□□ -1.22
SCFD1-214ENST00000554819 POLIQ9UNA4 740 aa7.41□□□□□ -1.22
SCFD1-214ENST00000554819 IVNS1ABPQ9Y6Y0 642 aa7.41□□□□□ -1.22
SCFD1-214ENST00000554819 FZD6O60353 706 aa7.4□□□□□ -1.22
SCFD1-214ENST00000554819 PSAPP07602 524 aa7.4□□□□□ -1.22
SCFD1-214ENST00000554819 MARSP56192 900 aaKnown RBP7.4□□□□□ -1.22
SCFD1-214ENST00000554819 C8orf34Q49A92 452 aa7.4□□□□□ -1.22
SCFD1-214ENST00000554819 TTC39BQ5VTQ0 682 aaPredicted RBP7.4□□□□□ -1.22
SCFD1-214ENST00000554819 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
SCFD1-214ENST00000554819 DHX32Q7L7V1 743 aaKnown RBP7.4□□□□□ -1.22
SCFD1-214ENST00000554819 TLR7Q9NYK1 1049 aaKnown RBP7.4□□□□□ -1.22
SCFD1-214ENST00000554819 BRPF3Q9ULD4 1205 aa7.4□□□□□ -1.22
SCFD1-214ENST00000554819 ADAMTS8Q9UP79 889 aa7.4□□□□□ -1.22
SCFD1-214ENST00000554819 SHISA8B8ZZ34 492 aa7.39□□□□□ -1.23
SCFD1-214ENST00000554819 NDUFB5O43674 189 aa7.39□□□□□ -1.23
SCFD1-214ENST00000554819 ADH7P40394 386 aa7.39□□□□□ -1.23
SCFD1-214ENST00000554819 PLAURQ03405 335 aa7.39□□□□□ -1.23
SCFD1-214ENST00000554819 TBC1D8BQ0IIM8 1120 aa7.39□□□□□ -1.23
SCFD1-214ENST00000554819 ECM1Q16610 540 aa7.39□□□□□ -1.23
SCFD1-214ENST00000554819 KANK3Q6NY19 840 aa7.39□□□□□ -1.23
SCFD1-214ENST00000554819 CHSY3Q70JA7 882 aa7.39□□□□□ -1.23
SCFD1-214ENST00000554819 ZNF438Q7Z4V0 828 aa7.39□□□□□ -1.23
SCFD1-214ENST00000554819 MDFIQ99750 246 aa7.39□□□□□ -1.23
SCFD1-214ENST00000554819 DNAJB12Q9NXW2 375 aaKnown RBP7.39□□□□□ -1.23
SCFD1-214ENST00000554819 BIN2Q9UBW5 565 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-214ENST00000554819 MMP20O60882 483 aa7.38□□□□□ -1.23
SCFD1-214ENST00000554819 SOX18P35713 384 aa7.38□□□□□ -1.23
SCFD1-214ENST00000554819 NRLP54845 237 aa7.38□□□□□ -1.23
SCFD1-214ENST00000554819 ARHGAP4P98171 946 aa7.38□□□□□ -1.23
SCFD1-214ENST00000554819 TRPM4Q8TD43 1214 aa7.38□□□□□ -1.23
SCFD1-214ENST00000554819 CITED4Q96RK1 184 aa7.38□□□□□ -1.23
SCFD1-214ENST00000554819 GGNBP2Q9H3C7 697 aa7.38□□□□□ -1.23
SCFD1-214ENST00000554819 ELP3Q9H9T3 547 aa7.38□□□□□ -1.23
SCFD1-214ENST00000554819 RRAGCQ9HB90 399 aa7.38□□□□□ -1.23
SCFD1-214ENST00000554819 CCDC87Q9NVE4 849 aa7.38□□□□□ -1.23
SCFD1-214ENST00000554819 ABI2Q9NYB9 513 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-214ENST00000554819 PIK3R2O00459 728 aa7.37□□□□□ -1.23
SCFD1-214ENST00000554819 PODNQ7Z5L7 613 aa7.37□□□□□ -1.23
SCFD1-214ENST00000554819 SCARF2Q96GP6 870 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-214ENST00000554819 SLC6A14Q9UN76 642 aa7.37□□□□□ -1.23
SCFD1-214ENST00000554819 GPLD1P80108 840 aa7.36□□□□□ -1.23
SCFD1-214ENST00000554819 PDE3BQ13370 1112 aa7.36□□□□□ -1.23
SCFD1-214ENST00000554819 GJD3Q8N144 294 aa7.36□□□□□ -1.23
SCFD1-214ENST00000554819 BEND7Q8N7W2 519 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-214ENST00000554819 OR13H1Q8NG92 308 aa7.36□□□□□ -1.23
SCFD1-214ENST00000554819 PMEPA1Q969W9 287 aa7.36□□□□□ -1.23
SCFD1-214ENST00000554819 PHF20L1A8MW92 1017 aa7.35□□□□□ -1.23
SCFD1-214ENST00000554819 NEFLP07196 543 aa7.35□□□□□ -1.23
SCFD1-214ENST00000554819 HOXD8P13378 290 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-214ENST00000554819 FAM35AQ86V20 835 aa7.35□□□□□ -1.23
SCFD1-214ENST00000554819 RBSNQ9H1K0 784 aa7.35□□□□□ -1.23
SCFD1-214ENST00000554819 TMEM63CQ9P1W3 806 aa7.35□□□□□ -1.23
SCFD1-214ENST00000554819 MKL2Q9ULH7 1088 aa7.35□□□□□ -1.23
SCFD1-214ENST00000554819 LOC102724428A0A0B4J2F2 783 aa7.34□□□□□ -1.23
SCFD1-214ENST00000554819 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
SCFD1-214ENST00000554819 RNF225M0QZC1 329 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-214ENST00000554819 SIK1P57059 783 aa7.34□□□□□ -1.23
SCFD1-214ENST00000554819 TMC1Q8TDI8 760 aa7.34□□□□□ -1.23
SCFD1-214ENST00000554819 A6NHS1 94 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 GHRHP01286 108 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 DGKGP49619 791 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 HYAL2Q12891 473 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 ELMSAN1Q6PJG2 1045 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 MICALL1Q8N3F8 863 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 SPACA7Q96KW9 195 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 RBCK1Q9BYM8 510 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 FRRS1LQ9P0K9 344 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 DCTN4Q9UJW0 460 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 STARD13Q9Y3M8 1113 aa7.33□□□□□ -1.24
SCFD1-214ENST00000554819 M0R082 166 aa7.32□□□□□ -1.24
SCFD1-214ENST00000554819 LILRB5O75023 590 aa7.32□□□□□ -1.24
SCFD1-214ENST00000554819 TNFRSF21O75509 655 aa7.32□□□□□ -1.24
SCFD1-214ENST00000554819 RGS9O75916 674 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-214ENST00000554819 CPB1P15086 417 aa7.32□□□□□ -1.24
SCFD1-214ENST00000554819 SNRPNP63162 240 aaKnown RBP7.32□□□□□ -1.24
SCFD1-214ENST00000554819 MLLT1Q03111 559 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms