RNA–Protein interactions for RNA: ENST00000554628.5

PTPN21-206, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 1,571 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-206ENST00000554628 NBPF7P0C2Y1 421 aaPredicted RBP22.92■■□□□ 1.26
PTPN21-206ENST00000554628 DDX46Q7L014 1031 aaKnown RBP22.92■■□□□ 1.26
PTPN21-206ENST00000554628 PLA2G12BQ9BX93 195 aa22.92■■□□□ 1.26
PTPN21-206ENST00000554628 C21orf2O43822 256 aa22.91■■□□□ 1.26
PTPN21-206ENST00000554628 CTSWP56202 376 aa22.91■■□□□ 1.26
PTPN21-206ENST00000554628 CCDC85AQ96PX6 553 aaPredicted RBP22.91■■□□□ 1.26
PTPN21-206ENST00000554628 UTYO14607 1347 aa22.9■■□□□ 1.26
PTPN21-206ENST00000554628 INTS3Q68E01 1043 aaKnown RBP22.9■■□□□ 1.26
PTPN21-206ENST00000554628 TTLL11Q8NHH1 800 aa22.9■■□□□ 1.26
PTPN21-206ENST00000554628 USP44Q9H0E7 712 aa22.9■■□□□ 1.26
PTPN21-206ENST00000554628 CHD4Q14839 1912 aa22.9■■□□□ 1.26
PTPN21-206ENST00000554628 COL4A1P02462 1669 aa22.9■■□□□ 1.26
PTPN21-206ENST00000554628 CCDC152Q4G0S7 254 aa22.89■■□□□ 1.26
PTPN21-206ENST00000554628 C7orf43Q8WVR3 580 aa22.89■■□□□ 1.26
PTPN21-206ENST00000554628 ARHGAP27Q6ZUM4 889 aa22.89■■□□□ 1.25
PTPN21-206ENST00000554628 FER1L6Q2WGJ9 1857 aa22.88■■□□□ 1.25
PTPN21-206ENST00000554628 GRAPQ13588 217 aa22.88■■□□□ 1.25
PTPN21-206ENST00000554628 GRAPLQ8TC17 118 aaPredicted RBP22.88■■□□□ 1.25
PTPN21-206ENST00000554628 SEC31BQ9NQW1 1179 aa22.88■■□□□ 1.25
PTPN21-206ENST00000554628 PPEF1O14829 653 aaPredicted RBP22.87■■□□□ 1.25
PTPN21-206ENST00000554628 FOXO4P98177 505 aa22.87■■□□□ 1.25
PTPN21-206ENST00000554628 EPHA10Q5JZY3 1008 aa22.87■■□□□ 1.25
PTPN21-206ENST00000554628 OLFM4Q6UX06 510 aa22.87■■□□□ 1.25
PTPN21-206ENST00000554628 CELF1Q92879 486 aaKnown RBP22.87■■□□□ 1.25
PTPN21-206ENST00000554628 SUCLG2Q96I99 432 aa22.87■■□□□ 1.25
PTPN21-206ENST00000554628 CSF1RP07333 972 aa22.86■■□□□ 1.25
PTPN21-206ENST00000554628 FTSJ3Q8IY81 847 aaKnown RBP22.86■■□□□ 1.25
PTPN21-206ENST00000554628 DZIP1LQ8IYY4 767 aaKnown RBP22.86■■□□□ 1.25
PTPN21-206ENST00000554628 TMEM57Q8N5G2 664 aa22.86■■□□□ 1.25
PTPN21-206ENST00000554628 KAZALD1Q96I82 304 aa22.86■■□□□ 1.25
PTPN21-206ENST00000554628 GREM2Q9H772 168 aa22.86■■□□□ 1.25
PTPN21-206ENST00000554628 BBOX1O75936 387 aa22.85■■□□□ 1.25
PTPN21-206ENST00000554628 RLBP1P12271 317 aa22.85■■□□□ 1.25
PTPN21-206ENST00000554628 SLC51AQ86UW1 340 aa22.85■■□□□ 1.25
PTPN21-206ENST00000554628 SBF1O95248 1867 aa22.85■■□□□ 1.25
PTPN21-206ENST00000554628 SPEF2Q9C093 1822 aa22.85■■□□□ 1.25
PTPN21-206ENST00000554628 PLIN1O60240 522 aa22.84■■□□□ 1.25
PTPN21-206ENST00000554628 CCDC88AQ3V6T2 1871 aa22.84■■□□□ 1.25
PTPN21-206ENST00000554628 SOGA3Q5TF21 947 aa22.84■■□□□ 1.25
PTPN21-206ENST00000554628 FAM161AQ3B820 660 aa22.84■■□□□ 1.25
PTPN21-206ENST00000554628 CCDC93Q567U6 631 aa22.84■■□□□ 1.25
PTPN21-206ENST00000554628 RTL9Q8NET4 1388 aa22.83■■□□□ 1.25
PTPN21-206ENST00000554628 RPS8P62241 208 aaKnown RBP22.83■■□□□ 1.25
PTPN21-206ENST00000554628 LMBR1LQ6UX01 489 aa22.83■■□□□ 1.25
PTPN21-206ENST00000554628 MEIS3Q99687 375 aa22.83■■□□□ 1.25
PTPN21-206ENST00000554628 ATP6V0A2Q9Y487 856 aa22.83■■□□□ 1.25
PTPN21-206ENST00000554628 LRRC37AA6NMS7 1700 aa22.82■■□□□ 1.24
PTPN21-206ENST00000554628 NFKBIEO00221 500 aa22.82■■□□□ 1.24
PTPN21-206ENST00000554628 UBTFL1P0CB47 393 aaPredicted RBP22.82■■□□□ 1.24
PTPN21-206ENST00000554628 SNED1Q8TER0 1413 aa22.82■■□□□ 1.24
PTPN21-206ENST00000554628 ITGA6P23229 1130 aa22.81■■□□□ 1.24
PTPN21-206ENST00000554628 RASSF7Q02833 373 aa22.81■■□□□ 1.24
PTPN21-206ENST00000554628 PANK1Q8TE04 598 aa22.81■■□□□ 1.24
PTPN21-206ENST00000554628 BICC1Q9H694 974 aaKnown RBP22.81■■□□□ 1.24
PTPN21-206ENST00000554628 CHMP3Q9Y3E7 222 aa22.81■■□□□ 1.24
PTPN21-206ENST00000554628 CC2D2BQ6DHV5 1058 aa22.8■■□□□ 1.24
PTPN21-206ENST00000554628 SP8Q8IXZ3 490 aa22.8■■□□□ 1.24
PTPN21-206ENST00000554628 CDC5LQ99459 802 aaKnown RBP22.8■■□□□ 1.24
PTPN21-206ENST00000554628 TMC4Q7Z404 712 aa22.8■■□□□ 1.24
PTPN21-206ENST00000554628 ANKRD18AQ8IVF6 992 aa22.8■■□□□ 1.24
PTPN21-206ENST00000554628 RTKN2Q8IZC4 609 aa22.8■■□□□ 1.24
PTPN21-206ENST00000554628 MS4A1P11836 297 aa22.79■■□□□ 1.24
PTPN21-206ENST00000554628 RABL6Q3YEC7 729 aaPredicted RBP22.79■■□□□ 1.24
PTPN21-206ENST00000554628 ITPRIPQ8IWB1 547 aa22.79■■□□□ 1.24
PTPN21-206ENST00000554628 ANKRD44Q8N8A2 993 aa22.79■■□□□ 1.24
PTPN21-206ENST00000554628 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.79■■□□□ 1.24
PTPN21-206ENST00000554628 TMX4Q9H1E5 349 aaPredicted RBP22.79■■□□□ 1.24
PTPN21-206ENST00000554628 ANKRD18BA2A2Z9 1011 aa22.78■■□□□ 1.24
PTPN21-206ENST00000554628 GNAI3P08754 354 aa22.78■■□□□ 1.24
PTPN21-206ENST00000554628 TAOK3Q9H2K8 898 aa22.78■■□□□ 1.24
PTPN21-206ENST00000554628 PRELPP51888 382 aa22.77■■□□□ 1.24
PTPN21-206ENST00000554628 IFIT5Q13325 482 aaKnown RBP22.77■■□□□ 1.24
PTPN21-206ENST00000554628 LRRFIP2Q9Y608 721 aaKnown RBP22.77■■□□□ 1.24
PTPN21-206ENST00000554628 LTBP3Q9NS15 1303 aa22.77■■□□□ 1.24
PTPN21-206ENST00000554628 FKBP4Q02790 459 aaKnown RBP eCLIP22.76■■□□□ 1.23
PTPN21-206ENST00000554628 CCDC57Q2TAC2 916 aa22.76■■□□□ 1.23
PTPN21-206ENST00000554628 DICER1Q9UPY3 1922 aaKnown RBP22.76■■□□□ 1.23
PTPN21-206ENST00000554628 GRIPAP1Q4V328 841 aa22.76■■□□□ 1.23
PTPN21-206ENST00000554628 HDAC5Q9UQL6 1122 aa22.76■■□□□ 1.23
PTPN21-206ENST00000554628 IGHMBP2P38935 993 aaKnown RBP22.75■■□□□ 1.23
PTPN21-206ENST00000554628 PSMD1Q99460 953 aa22.75■■□□□ 1.23
PTPN21-206ENST00000554628 BSDC1Q9NW68 430 aaPredicted RBP22.75■■□□□ 1.23
PTPN21-206ENST00000554628 LTBP1Q14766 1721 aa22.74■■□□□ 1.23
PTPN21-206ENST00000554628 ZBTB7BO15156 539 aaPredicted RBP22.74■■□□□ 1.23
PTPN21-206ENST00000554628 C20orf194Q5TEA3 1177 aa22.74■■□□□ 1.23
PTPN21-206ENST00000554628 MPNDQ8N594 471 aa22.74■■□□□ 1.23
PTPN21-206ENST00000554628 COG6Q9Y2V7 657 aa22.74■■□□□ 1.23
PTPN21-206ENST00000554628 LMNB1P20700 586 aa22.73■■□□□ 1.23
PTPN21-206ENST00000554628 PDE3AQ14432 1141 aa22.73■■□□□ 1.23
PTPN21-206ENST00000554628 C9orf131Q5VYM1 1079 aa22.73■■□□□ 1.23
PTPN21-206ENST00000554628 DPP8Q6V1X1 898 aaPredicted RBP22.73■■□□□ 1.23
PTPN21-206ENST00000554628 ZNF594Q96JF6 807 aaPredicted RBP22.73■■□□□ 1.23
PTPN21-206ENST00000554628 MPHOSPH8Q99549 860 aa22.73■■□□□ 1.23
PTPN21-206ENST00000554628 RNF181Q9P0P0 153 aa22.73■■□□□ 1.23
PTPN21-206ENST00000554628 NSFL1CQ9UNZ2 370 aaKnown RBP22.73■■□□□ 1.23
PTPN21-206ENST00000554628 DUOX1Q9NRD9 1551 aa22.73■■□□□ 1.23
PTPN21-206ENST00000554628 GPSM2P81274 684 aa22.72■■□□□ 1.23
PTPN21-206ENST00000554628 MVPQ14764 893 aaKnown RBP22.72■■□□□ 1.23
PTPN21-206ENST00000554628 ZNF277Q9NRM2 450 aaPredicted RBP22.72■■□□□ 1.23
PTPN21-206ENST00000554628 GNAI2P04899 355 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms