RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 CIAPIN1Q6FI81 312 aa31.69■■■□□ 2.66
FOXA1-204ENST00000554607 GPR101Q96P66 508 aaPredicted RBP31.69■■■□□ 2.66
FOXA1-204ENST00000554607 SH3TC1Q8TE82 1336 aa31.69■■■□□ 2.66
FOXA1-204ENST00000554607 GMPSP49915 693 aaPredicted RBP31.68■■■□□ 2.66
FOXA1-204ENST00000554607 NECTIN2Q92692 538 aa31.68■■■□□ 2.66
FOXA1-204ENST00000554607 CDHR2Q9BYE9 1310 aa31.68■■■□□ 2.66
FOXA1-204ENST00000554607 GRAPQ13588 217 aa31.67■■■□□ 2.66
FOXA1-204ENST00000554607 CYP4F22Q6NT55 531 aa31.67■■■□□ 2.66
FOXA1-204ENST00000554607 TMC4Q7Z404 712 aa31.67■■■□□ 2.66
FOXA1-204ENST00000554607 GRAPLQ8TC17 118 aaPredicted RBP31.67■■■□□ 2.66
FOXA1-204ENST00000554607 ANKRD36CQ5JPF3 1778 aa31.66■■■□□ 2.66
FOXA1-204ENST00000554607 BCL2L13Q9BXK5 485 aa31.66■■■□□ 2.66
FOXA1-204ENST00000554607 GRM1Q13255 1194 aa31.65■■■□□ 2.66
FOXA1-204ENST00000554607 ZC3H15Q8WU90 426 aaKnown RBP31.65■■■□□ 2.66
FOXA1-204ENST00000554607 PGAP2Q9UHJ9 254 aa31.65■■■□□ 2.66
FOXA1-204ENST00000554607 MAP2K2P36507 400 aa31.64■■■□□ 2.66
FOXA1-204ENST00000554607 CHL1O00533 1208 aa31.63■■■□□ 2.65
FOXA1-204ENST00000554607 THSD7BQ9C0I4 1608 aa31.63■■■□□ 2.65
FOXA1-204ENST00000554607 RAD17O75943 681 aa31.62■■■□□ 2.65
FOXA1-204ENST00000554607 CELF2O95319 508 aaKnown RBP31.62■■■□□ 2.65
FOXA1-204ENST00000554607 LAMB2P55268 1798 aa31.62■■■□□ 2.65
FOXA1-204ENST00000554607 ABHD8Q96I13 439 aa31.62■■■□□ 2.65
FOXA1-204ENST00000554607 SAPCD2Q86UD0 394 aa31.61■■■□□ 2.65
FOXA1-204ENST00000554607 HHIPL1Q96JK4 782 aa31.61■■■□□ 2.65
FOXA1-204ENST00000554607 NEUROD2Q15784 382 aa31.6■■■□□ 2.65
FOXA1-204ENST00000554607 GLIS2Q9BZE0 524 aaPredicted RBP31.6■■■□□ 2.65
FOXA1-204ENST00000554607 CDC37L1Q7L3B6 337 aa31.59■■■□□ 2.65
FOXA1-204ENST00000554607 PLBD2Q8NHP8 589 aa31.59■■■□□ 2.65
FOXA1-204ENST00000554607 H7C1D1 291 aa31.58■■■□□ 2.65
FOXA1-204ENST00000554607 CHPF2Q9P2E5 772 aa31.58■■■□□ 2.65
FOXA1-204ENST00000554607 CNOT7Q9UIV1 285 aaKnown RBP31.58■■■□□ 2.65
FOXA1-204ENST00000554607 LAS1LQ9Y4W2 734 aaKnown RBP31.58■■■□□ 2.65
FOXA1-204ENST00000554607 HOXB7P09629 217 aa31.57■■■□□ 2.64
FOXA1-204ENST00000554607 KRT24Q2M2I5 525 aa31.57■■■□□ 2.64
FOXA1-204ENST00000554607 ANKRD13DQ6ZTN6 518 aa31.57■■■□□ 2.64
FOXA1-204ENST00000554607 CA12O43570 354 aa31.56■■■□□ 2.64
FOXA1-204ENST00000554607 HIRAP54198 1017 aaPredicted RBP31.56■■■□□ 2.64
FOXA1-204ENST00000554607 HDGFL1Q5TGJ6 251 aa31.56■■■□□ 2.64
FOXA1-204ENST00000554607 YDJCA8MPS7 323 aa31.55■■■□□ 2.64
FOXA1-204ENST00000554607 AOC2O75106 756 aa31.55■■■□□ 2.64
FOXA1-204ENST00000554607 SF3B3Q15393 1217 aaKnown RBP31.55■■■□□ 2.64
FOXA1-204ENST00000554607 WASHC4Q2M389 1173 aa31.55■■■□□ 2.64
FOXA1-204ENST00000554607 CCDC146Q8IYE0 955 aa31.55■■■□□ 2.64
FOXA1-204ENST00000554607 RUNDC1Q96C34 613 aa31.55■■■□□ 2.64
FOXA1-204ENST00000554607 DBF4Q9UBU7 674 aaPredicted RBP31.55■■■□□ 2.64
FOXA1-204ENST00000554607 DPF2Q92785 391 aa31.54■■■□□ 2.64
FOXA1-204ENST00000554607 ISCA1Q9BUE6 129 aa31.54■■■□□ 2.64
FOXA1-204ENST00000554607 TRPM4Q8TD43 1214 aa31.53■■■□□ 2.64
FOXA1-204ENST00000554607 ZNF408Q9H9D4 720 aa31.53■■■□□ 2.64
FOXA1-204ENST00000554607 NSFL1CQ9UNZ2 370 aaKnown RBP31.53■■■□□ 2.64
FOXA1-204ENST00000554607 TRIM35Q9UPQ4 493 aa31.53■■■□□ 2.64
FOXA1-204ENST00000554607 MYBBP1AQ9BQG0 1328 aaKnown RBP31.52■■■□□ 2.64
FOXA1-204ENST00000554607 MICALL2Q8IY33 904 aa31.52■■■□□ 2.64
FOXA1-204ENST00000554607 FAM89AQ96GI7 184 aa31.52■■■□□ 2.64
FOXA1-204ENST00000554607 TAF1P21675 1872 aa31.51■■■□□ 2.63
FOXA1-204ENST00000554607 WDR43Q15061 677 aaKnown RBP eCLIP31.51■■■□□ 2.63
FOXA1-204ENST00000554607 HYPKQ9NX55 129 aa31.51■■■□□ 2.63
FOXA1-204ENST00000554607 BRPF1P55201 1214 aaPredicted RBP31.5■■■□□ 2.63
FOXA1-204ENST00000554607 CELF1Q92879 486 aaKnown RBP31.5■■■□□ 2.63
FOXA1-204ENST00000554607 DUOX1Q9NRD9 1551 aa31.5■■■□□ 2.63
FOXA1-204ENST00000554607 LRRC37AA6NMS7 1700 aa31.49■■■□□ 2.63
FOXA1-204ENST00000554607 ATP5J2-PTCD1G3V325 749 aa31.49■■■□□ 2.63
FOXA1-204ENST00000554607 C6orf229H3BNL8 230 aa31.49■■■□□ 2.63
FOXA1-204ENST00000554607 ZNF428Q96B54 188 aa31.49■■■□□ 2.63
FOXA1-204ENST00000554607 EYA3Q99504 573 aa31.49■■■□□ 2.63
FOXA1-204ENST00000554607 PSMD14O00487 310 aa31.48■■■□□ 2.63
FOXA1-204ENST00000554607 TRIM28Q13263 835 aaKnown RBP31.48■■■□□ 2.63
FOXA1-204ENST00000554607 ZBTB12Q9Y330 459 aaPredicted RBP31.48■■■□□ 2.63
FOXA1-204ENST00000554607 DDX60Q8IY21 1712 aaKnown RBP31.47■■■□□ 2.63
FOXA1-204ENST00000554607 SHTN1A0MZ66 631 aa31.47■■■□□ 2.63
FOXA1-204ENST00000554607 RPS12P25398 132 aaKnown RBP31.47■■■□□ 2.63
FOXA1-204ENST00000554607 USP48Q86UV5 1035 aa31.47■■■□□ 2.63
FOXA1-204ENST00000554607 CFAP44Q96MT7 982 aa31.47■■■□□ 2.63
FOXA1-204ENST00000554607 DBNDD1Q9H9R9 158 aa31.47■■■□□ 2.63
FOXA1-204ENST00000554607 TSKSQ9UJT2 592 aa31.47■■■□□ 2.63
FOXA1-204ENST00000554607 RIMBP2O15034 1052 aa31.46■■■□□ 2.63
FOXA1-204ENST00000554607 POLLQ9UGP5 575 aa31.46■■■□□ 2.63
FOXA1-204ENST00000554607 CCDC85CA6NKD9 419 aa31.45■■■□□ 2.63
FOXA1-204ENST00000554607 IRS4O14654 1257 aaPredicted RBP31.45■■■□□ 2.63
FOXA1-204ENST00000554607 HSP90B1P14625 803 aaKnown RBP31.45■■■□□ 2.63
FOXA1-204ENST00000554607 GPSM2P81274 684 aa31.45■■■□□ 2.63
FOXA1-204ENST00000554607 NOGQ13253 232 aa31.45■■■□□ 2.63
FOXA1-204ENST00000554607 DUSP27Q5VZP5 1158 aa31.45■■■□□ 2.63
FOXA1-204ENST00000554607 SAMD7Q7Z3H4 446 aa31.45■■■□□ 2.63
FOXA1-204ENST00000554607 RPS8P62241 208 aaKnown RBP31.44■■■□□ 2.62
FOXA1-204ENST00000554607 HUNKP57058 714 aa31.43■■■□□ 2.62
FOXA1-204ENST00000554607 RTL5Q5HYW3 569 aaPredicted RBP31.43■■■□□ 2.62
FOXA1-204ENST00000554607 ECE2O60344 883 aa31.42■■■□□ 2.62
FOXA1-204ENST00000554607 TBC1D10BQ4KMP7 808 aaPredicted RBP31.42■■■□□ 2.62
FOXA1-204ENST00000554607 KRT26Q7Z3Y9 468 aa31.42■■■□□ 2.62
FOXA1-204ENST00000554607 ADAMTS8Q9UP79 889 aa31.42■■■□□ 2.62
FOXA1-204ENST00000554607 DDX10Q13206 875 aaKnown RBP31.41■■■□□ 2.62
FOXA1-204ENST00000554607 RIC3Q7Z5B4 369 aa31.41■■■□□ 2.62
FOXA1-204ENST00000554607 TBC1D16Q8TBP0 767 aa31.41■■■□□ 2.62
FOXA1-204ENST00000554607 DCPSQ96C86 337 aaKnown RBP31.41■■■□□ 2.62
FOXA1-204ENST00000554607 ZC3H12CQ9C0D7 883 aaKnown RBP31.41■■■□□ 2.62
FOXA1-204ENST00000554607 GOLGA2Q08379 1002 aa31.4■■■□□ 2.62
FOXA1-204ENST00000554607 DOK7Q18PE1 504 aa31.4■■■□□ 2.62
FOXA1-204ENST00000554607 FAM161AQ3B820 660 aa31.4■■■□□ 2.62
FOXA1-204ENST00000554607 ZBTB38Q8NAP3 1195 aaPredicted RBP31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms