RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 NIM1KQ8IY84 436 aa14.35□□□□□ -0.11
ABCD4-221ENST00000554453 ZBTB38Q8NAP3 1195 aaPredicted RBP14.35□□□□□ -0.11
ABCD4-221ENST00000554453 CCDC191Q8NCU4 936 aa14.35□□□□□ -0.11
ABCD4-221ENST00000554453 ZNF428Q96B54 188 aa14.35□□□□□ -0.11
ABCD4-221ENST00000554453 IL16Q14005 1332 aa14.35□□□□□ -0.11
ABCD4-221ENST00000554453 HSP90B1P14625 803 aaKnown RBP14.34□□□□□ -0.11
ABCD4-221ENST00000554453 DPP8Q6V1X1 898 aaPredicted RBP14.34□□□□□ -0.11
ABCD4-221ENST00000554453 METTL22Q9BUU2 404 aaPredicted RBP14.34□□□□□ -0.11
ABCD4-221ENST00000554453 ZNRF3Q9ULT6 936 aa14.34□□□□□ -0.11
ABCD4-221ENST00000554453 DDX58O95786 925 aaKnown RBP14.33□□□□□ -0.12
ABCD4-221ENST00000554453 RPS8P62241 208 aaKnown RBP14.33□□□□□ -0.12
ABCD4-221ENST00000554453 AOC3Q16853 763 aa14.33□□□□□ -0.12
ABCD4-221ENST00000554453 EAPPQ56P03 285 aaPredicted RBP14.33□□□□□ -0.12
ABCD4-221ENST00000554453 RTL5Q5HYW3 569 aaPredicted RBP14.33□□□□□ -0.12
ABCD4-221ENST00000554453 KSR2Q6VAB6 950 aa14.33□□□□□ -0.12
ABCD4-221ENST00000554453 TSR2Q969E8 191 aaKnown RBP14.33□□□□□ -0.12
ABCD4-221ENST00000554453 MYD88Q99836 296 aa14.33□□□□□ -0.12
ABCD4-221ENST00000554453 CREBZFQ9NS37 354 aa14.33□□□□□ -0.12
ABCD4-221ENST00000554453 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
ABCD4-221ENST00000554453 GJA3Q9Y6H8 435 aa14.33□□□□□ -0.12
ABCD4-221ENST00000554453 TAF1P21675 1872 aa14.33□□□□□ -0.12
ABCD4-221ENST00000554453 PCCAP05165 728 aaPredicted RBP14.32□□□□□ -0.12
ABCD4-221ENST00000554453 EPS15P42566 896 aa14.32□□□□□ -0.12
ABCD4-221ENST00000554453 CXCL9Q07325 125 aa14.32□□□□□ -0.12
ABCD4-221ENST00000554453 KIAA2012Q0VF49 1180 aa14.32□□□□□ -0.12
ABCD4-221ENST00000554453 WDR63Q8IWG1 891 aa14.32□□□□□ -0.12
ABCD4-221ENST00000554453 CELF1Q92879 486 aaKnown RBP14.32□□□□□ -0.12
ABCD4-221ENST00000554453 PASKQ96RG2 1323 aa14.32□□□□□ -0.12
ABCD4-221ENST00000554453 COL4A5P29400 1685 aa14.31□□□□□ -0.12
ABCD4-221ENST00000554453 LMOD1P29536 600 aaPredicted RBP14.31□□□□□ -0.12
ABCD4-221ENST00000554453 SCNN1DP51172 638 aa14.31□□□□□ -0.12
ABCD4-221ENST00000554453 TWISTNBQ3B726 338 aaPredicted RBP14.31□□□□□ -0.12
ABCD4-221ENST00000554453 CNTROBQ8N137 903 aa14.31□□□□□ -0.12
ABCD4-221ENST00000554453 LAMB2P55268 1798 aa14.31□□□□□ -0.12
ABCD4-221ENST00000554453 PI4KAP2A4QPH2 592 aa14.3□□□□□ -0.12
ABCD4-221ENST00000554453 PDE8AO60658 829 aa14.3□□□□□ -0.12
ABCD4-221ENST00000554453 PI4KAP1Q8N8J0 262 aa14.3□□□□□ -0.12
ABCD4-221ENST00000554453 STK31Q9BXU1 1019 aa14.3□□□□□ -0.12
ABCD4-221ENST00000554453 CWC25Q9NXE8 425 aaPredicted RBP14.3□□□□□ -0.12
ABCD4-221ENST00000554453 NSFL1CQ9UNZ2 370 aaKnown RBP14.3□□□□□ -0.12
ABCD4-221ENST00000554453 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
ABCD4-221ENST00000554453 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
ABCD4-221ENST00000554453 TNIP1Q15025 636 aa14.29□□□□□ -0.12
ABCD4-221ENST00000554453 CIAPIN1Q6FI81 312 aa14.29□□□□□ -0.12
ABCD4-221ENST00000554453 USP50Q70EL3 339 aaPredicted RBP14.29□□□□□ -0.12
ABCD4-221ENST00000554453 CACNA1FO60840 1977 aa14.29□□□□□ -0.12
ABCD4-221ENST00000554453 TMEM88BA6NKF7 163 aa14.28□□□□□ -0.12
ABCD4-221ENST00000554453 VAMP4O75379 141 aa14.28□□□□□ -0.12
ABCD4-221ENST00000554453 IGKV5-2P06315 115 aa14.28□□□□□ -0.12
ABCD4-221ENST00000554453 WASHC4Q2M389 1173 aa14.28□□□□□ -0.12
ABCD4-221ENST00000554453 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
ABCD4-221ENST00000554453 MAP1SQ66K74 1059 aaPredicted RBP14.28□□□□□ -0.12
ABCD4-221ENST00000554453 G2E3Q7L622 706 aa14.28□□□□□ -0.12
ABCD4-221ENST00000554453 JARID2Q92833 1246 aaPredicted RBP14.28□□□□□ -0.12
ABCD4-221ENST00000554453 SEC31BQ9NQW1 1179 aa14.28□□□□□ -0.12
ABCD4-221ENST00000554453 GPRC5DQ9NZD1 345 aa14.28□□□□□ -0.12
ABCD4-221ENST00000554453 POLLQ9UGP5 575 aa14.28□□□□□ -0.12
ABCD4-221ENST00000554453 GPSM2P81274 684 aa14.27□□□□□ -0.13
ABCD4-221ENST00000554453 NEXNQ0ZGT2 675 aa14.27□□□□□ -0.13
ABCD4-221ENST00000554453 CCDC152Q4G0S7 254 aa14.27□□□□□ -0.13
ABCD4-221ENST00000554453 ADARB2Q9NS39 739 aaKnown RBP14.27□□□□□ -0.13
ABCD4-221ENST00000554453 PODXL2Q9NZ53 605 aa14.27□□□□□ -0.13
ABCD4-221ENST00000554453 SALL2Q9Y467 1007 aaPredicted RBP14.27□□□□□ -0.13
ABCD4-221ENST00000554453 DDX60Q8IY21 1712 aaKnown RBP14.27□□□□□ -0.13
ABCD4-221ENST00000554453 CDHR2Q9BYE9 1310 aa14.26□□□□□ -0.13
ABCD4-221ENST00000554453 YDJCA8MPS7 323 aa14.26□□□□□ -0.13
ABCD4-221ENST00000554453 C6orf229H3BNL8 230 aa14.26□□□□□ -0.13
ABCD4-221ENST00000554453 H7C1W4 665 aa14.26□□□□□ -0.13
ABCD4-221ENST00000554453 RAD17O75943 681 aa14.26□□□□□ -0.13
ABCD4-221ENST00000554453 EYA3Q99504 573 aa14.26□□□□□ -0.13
ABCD4-221ENST00000554453 GMPSP49915 693 aaPredicted RBP14.25□□□□□ -0.13
ABCD4-221ENST00000554453 TTLL11Q8NHH1 800 aa14.25□□□□□ -0.13
ABCD4-221ENST00000554453 TBC1D16Q8TBP0 767 aa14.25□□□□□ -0.13
ABCD4-221ENST00000554453 DPF2Q92785 391 aa14.25□□□□□ -0.13
ABCD4-221ENST00000554453 ZC3H12CQ9C0D7 883 aaKnown RBP14.25□□□□□ -0.13
ABCD4-221ENST00000554453 MKRN1Q9UHC7 482 aaKnown RBP14.25□□□□□ -0.13
ABCD4-221ENST00000554453 PGAP2Q9UHJ9 254 aa14.25□□□□□ -0.13
ABCD4-221ENST00000554453 ADAMTSL1Q8N6G6 1762 aa14.24□□□□□ -0.13
ABCD4-221ENST00000554453 FANCIQ9NVI1 1328 aa14.24□□□□□ -0.13
ABCD4-221ENST00000554453 NEURL1BA8MQ27 555 aa14.24□□□□□ -0.13
ABCD4-221ENST00000554453 RIMBP2O15034 1052 aa14.24□□□□□ -0.13
ABCD4-221ENST00000554453 EXOSC9Q06265 439 aaKnown RBP14.24□□□□□ -0.13
ABCD4-221ENST00000554453 FLIIQ13045 1269 aa14.24□□□□□ -0.13
ABCD4-221ENST00000554453 FAM9BQ8IZU0 186 aa14.24□□□□□ -0.13
ABCD4-221ENST00000554453 BCL2L13Q9BXK5 485 aa14.24□□□□□ -0.13
ABCD4-221ENST00000554453 CNOT7Q9UIV1 285 aaKnown RBP14.24□□□□□ -0.13
ABCD4-221ENST00000554453 CWF19L2Q2TBE0 894 aaKnown RBP14.23□□□□□ -0.13
ABCD4-221ENST00000554453 DEFB115Q30KQ5 88 aa14.23□□□□□ -0.13
ABCD4-221ENST00000554453 ANKRD18AQ8IVF6 992 aa14.23□□□□□ -0.13
ABCD4-221ENST00000554453 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
ABCD4-221ENST00000554453 DBNDD1Q9H9R9 158 aa14.23□□□□□ -0.13
ABCD4-221ENST00000554453 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
ABCD4-221ENST00000554453 POLR2AP24928 1970 aaKnown RBP14.23□□□□□ -0.13
ABCD4-221ENST00000554453 LTBP1Q14766 1721 aa14.23□□□□□ -0.13
ABCD4-221ENST00000554453 CNTNAP1P78357 1384 aa14.22□□□□□ -0.13
ABCD4-221ENST00000554453 H7C1D1 291 aa14.22□□□□□ -0.13
ABCD4-221ENST00000554453 PSMD14O00487 310 aa14.22□□□□□ -0.13
ABCD4-221ENST00000554453 HIRAP54198 1017 aaPredicted RBP14.22□□□□□ -0.13
ABCD4-221ENST00000554453 CTSWP56202 376 aa14.22□□□□□ -0.13
ABCD4-221ENST00000554453 GCKRQ14397 625 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms