RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 TTC16Q8NEE8 873 aa4.67□□□□□ -1.66
IFT43-208ENST00000554423 PIK3R5Q8WYR1 880 aa4.67□□□□□ -1.66
IFT43-208ENST00000554423 BHMTQ93088 406 aa4.67□□□□□ -1.66
IFT43-208ENST00000554423 SUV39H2Q9H5I1 410 aa4.67□□□□□ -1.66
IFT43-208ENST00000554423 SHISA8B8ZZ34 492 aa4.66□□□□□ -1.66
IFT43-208ENST00000554423 MAP3K6O95382 1288 aa4.66□□□□□ -1.66
IFT43-208ENST00000554423 PCSK2P16519 638 aa4.66□□□□□ -1.66
IFT43-208ENST00000554423 COX20Q5RI15 118 aa4.66□□□□□ -1.66
IFT43-208ENST00000554423 FCHSD1Q86WN1 690 aa4.66□□□□□ -1.66
IFT43-208ENST00000554423 TREML1Q86YW5 311 aa4.66□□□□□ -1.66
IFT43-208ENST00000554423 TNFRSF25Q93038 417 aa4.66□□□□□ -1.66
IFT43-208ENST00000554423 SLC30A3Q99726 388 aa4.66□□□□□ -1.66
IFT43-208ENST00000554423 GSX2Q9BZM3 304 aa4.66□□□□□ -1.66
IFT43-208ENST00000554423 UBE2OQ9C0C9 1292 aaKnown RBP4.66□□□□□ -1.66
IFT43-208ENST00000554423 STIM2Q9P246 746 aa4.66□□□□□ -1.66
IFT43-208ENST00000554423 DMGDHQ9UI17 866 aaKnown RBP4.66□□□□□ -1.66
IFT43-208ENST00000554423 SUPT5HO00267 1087 aaKnown RBP4.65□□□□□ -1.67
IFT43-208ENST00000554423 GATA4P43694 442 aa4.65□□□□□ -1.67
IFT43-208ENST00000554423 FZD5Q13467 585 aa4.65□□□□□ -1.67
IFT43-208ENST00000554423 NAA30Q147X3 362 aaPredicted RBP4.65□□□□□ -1.67
IFT43-208ENST00000554423 CMTR1Q8N1G2 835 aaKnown RBP4.65□□□□□ -1.67
IFT43-208ENST00000554423 IGFLR1Q9H665 355 aa4.65□□□□□ -1.67
IFT43-208ENST00000554423 KLF15Q9UIH9 416 aa4.65□□□□□ -1.67
IFT43-208ENST00000554423 BCS1LQ9Y276 419 aa4.65□□□□□ -1.67
IFT43-208ENST00000554423 USTQ9Y2C2 406 aa4.65□□□□□ -1.67
IFT43-208ENST00000554423 RTCBQ9Y3I0 505 aaKnown RBP4.65□□□□□ -1.67
IFT43-208ENST00000554423 ADH7P40394 386 aa4.64□□□□□ -1.67
IFT43-208ENST00000554423 TBC1D8BQ0IIM8 1120 aa4.64□□□□□ -1.67
IFT43-208ENST00000554423 RSPO4Q2I0M5 234 aaPredicted RBP4.64□□□□□ -1.67
IFT43-208ENST00000554423 MCTP1Q6DN14 999 aa4.64□□□□□ -1.67
IFT43-208ENST00000554423 C1orf229Q6ZS94 237 aaPredicted RBP4.64□□□□□ -1.67
IFT43-208ENST00000554423 ARID3AQ99856 593 aa4.64□□□□□ -1.67
IFT43-208ENST00000554423 MKNK1Q9BUB5 465 aa4.64□□□□□ -1.67
IFT43-208ENST00000554423 C1orf115Q9H7X2 142 aa4.64□□□□□ -1.67
IFT43-208ENST00000554423 LRFN2Q9ULH4 789 aa4.64□□□□□ -1.67
IFT43-208ENST00000554423 OPLAHO14841 1288 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 LILRB5O75023 590 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 XYLBO75191 536 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 EGFRP00533 1210 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 PSAPP07602 524 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 RARAP10276 462 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 NFKB1P19838 968 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 SSFA2P28290 1259 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 LRP8Q14114 963 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 PRRT3Q5FWE3 981 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 ALKBH2Q6NS38 261 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 RGL4Q8IZJ4 473 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 RBSNQ9H1K0 784 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 PRDM6Q9NQX0 595 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 HCN2Q9UL51 889 aa4.63□□□□□ -1.67
IFT43-208ENST00000554423 RGS9O75916 674 aaPredicted RBP4.62□□□□□ -1.67
IFT43-208ENST00000554423 SASH3O75995 380 aa4.62□□□□□ -1.67
IFT43-208ENST00000554423 DGKGP49619 791 aa4.62□□□□□ -1.67
IFT43-208ENST00000554423 TTC39BQ5VTQ0 682 aaPredicted RBP4.62□□□□□ -1.67
IFT43-208ENST00000554423 LINC00114Q6XXX2 140 aa4.62□□□□□ -1.67
IFT43-208ENST00000554423 RAB44Q7Z6P3 723 aaPredicted RBP4.62□□□□□ -1.67
IFT43-208ENST00000554423 NLRP13Q86W25 1043 aa4.62□□□□□ -1.67
IFT43-208ENST00000554423 SAP130Q9H0E3 1048 aa4.62□□□□□ -1.67
IFT43-208ENST00000554423 DNAJB12Q9NXW2 375 aaKnown RBP4.62□□□□□ -1.67
IFT43-208ENST00000554423 UBAP1LF5GYI3 381 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 M0R082 166 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 FAM13AO94988 1023 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 ZAP70P43403 619 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 PLAURQ03405 335 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 TRIM28Q13263 835 aaKnown RBP4.61□□□□□ -1.67
IFT43-208ENST00000554423 SF3B2Q13435 895 aaKnown RBP4.61□□□□□ -1.67
IFT43-208ENST00000554423 AAMPQ13685 434 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 NOM1Q5C9Z4 860 aaKnown RBP4.61□□□□□ -1.67
IFT43-208ENST00000554423 ELMSAN1Q6PJG2 1045 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 DHX32Q7L7V1 743 aaKnown RBP4.61□□□□□ -1.67
IFT43-208ENST00000554423 KRT25Q7Z3Z0 450 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 FAM35AQ86V20 835 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 ETFBKMTQ8IXQ9 262 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 MICALL1Q8N3F8 863 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 ZNF417Q8TAU3 575 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 TRPM4Q8TD43 1214 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 HELQQ8TDG4 1101 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 ZNF587Q96SQ5 575 aaPredicted RBP4.61□□□□□ -1.67
IFT43-208ENST00000554423 TLR7Q9NYK1 1049 aaKnown RBP4.61□□□□□ -1.67
IFT43-208ENST00000554423 SLC6A14Q9UN76 642 aa4.61□□□□□ -1.67
IFT43-208ENST00000554423 TMEM88BA6NKF7 163 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 HYAL3O43820 417 aaPredicted RBP4.6□□□□□ -1.67
IFT43-208ENST00000554423 TARSP26639 723 aaKnown RBP4.6□□□□□ -1.67
IFT43-208ENST00000554423 USP5P45974 858 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 NRLP54845 237 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 RAC1P63000 192 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 GPLD1P80108 840 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 PRSS36Q5K4E3 855 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 NKAPLQ5M9Q1 402 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 TRAPPC3LQ5T215 181 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 CACTIN-AS1Q8N1I8 211 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 DCAF11Q8TEB1 546 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 GTF3C2Q8WUA4 911 aaPredicted RBP4.6□□□□□ -1.67
IFT43-208ENST00000554423 SPACA7Q96KW9 195 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 NACC1Q96RE7 527 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 MDFIQ99750 246 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 PLVAPQ9BX97 442 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 FRRS1LQ9P0K9 344 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 TIMELESSQ9UNS1 1208 aa4.6□□□□□ -1.67
IFT43-208ENST00000554423 ARID1BQ8NFD5 2236 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms