RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 DIAPH3Q9NSV4 1193 aa17.65■□□□□ 0.42
PPP4R3A-201ENST00000554308 PLCH1Q4KWH8 1693 aa17.65■□□□□ 0.42
PPP4R3A-201ENST00000554308 RBM10P98175 930 aaKnown RBP17.64■□□□□ 0.41
PPP4R3A-201ENST00000554308 TNNI3KQ59H18 835 aa17.64■□□□□ 0.41
PPP4R3A-201ENST00000554308 PKNOX2Q96KN3 472 aa17.64■□□□□ 0.41
PPP4R3A-201ENST00000554308 NDUFB9Q9Y6M9 179 aa17.64■□□□□ 0.41
PPP4R3A-201ENST00000554308 FPGT-TNNI3KV9GXZ4 949 aa17.64■□□□□ 0.41
PPP4R3A-201ENST00000554308 MAP3K15Q6ZN16 1313 aa17.64■□□□□ 0.41
PPP4R3A-201ENST00000554308 EP400Q96L91 3159 aa17.64■□□□□ 0.41
PPP4R3A-201ENST00000554308 GIGYF2Q6Y7W6 1299 aaKnown RBP17.64■□□□□ 0.41
PPP4R3A-201ENST00000554308 TMEM63CQ9P1W3 806 aa17.64■□□□□ 0.41
PPP4R3A-201ENST00000554308 DBNLQ9UJU6 430 aaKnown RBP17.64■□□□□ 0.41
PPP4R3A-201ENST00000554308 SGSM2O43147 1006 aa17.63■□□□□ 0.41
PPP4R3A-201ENST00000554308 MCCP23508 829 aa17.63■□□□□ 0.41
PPP4R3A-201ENST00000554308 NEK4P51957 841 aa17.63■□□□□ 0.41
PPP4R3A-201ENST00000554308 NEUROD6Q96NK8 337 aa17.63■□□□□ 0.41
PPP4R3A-201ENST00000554308 SYCE3A1L190 88 aa17.63■□□□□ 0.41
PPP4R3A-201ENST00000554308 ST18O60284 1047 aa17.63■□□□□ 0.41
PPP4R3A-201ENST00000554308 LRRC24Q50LG9 513 aa17.63■□□□□ 0.41
PPP4R3A-201ENST00000554308 EVI5LQ96CN4 794 aa17.63■□□□□ 0.41
PPP4R3A-201ENST00000554308 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
PPP4R3A-201ENST00000554308 BARGINQ6ZT62 677 aa17.62■□□□□ 0.41
PPP4R3A-201ENST00000554308 DZIP3Q86Y13 1208 aaKnown RBP17.62■□□□□ 0.41
PPP4R3A-201ENST00000554308 R3HCC1Q9Y3T6 440 aaKnown RBP17.62■□□□□ 0.41
PPP4R3A-201ENST00000554308 COL15A1P39059 1388 aa17.62■□□□□ 0.41
PPP4R3A-201ENST00000554308 TIMM10P62072 90 aa17.62■□□□□ 0.41
PPP4R3A-201ENST00000554308 PDLIM2Q96JY6 352 aa17.62■□□□□ 0.41
PPP4R3A-201ENST00000554308 DBNDD2Q9BQY9 259 aa17.62■□□□□ 0.41
PPP4R3A-201ENST00000554308 LOC102724428A0A0B4J2F2 783 aa17.61■□□□□ 0.41
PPP4R3A-201ENST00000554308 SIK1P57059 783 aa17.61■□□□□ 0.41
PPP4R3A-201ENST00000554308 CCDC57Q2TAC2 916 aa17.61■□□□□ 0.41
PPP4R3A-201ENST00000554308 PUS3Q9BZE2 481 aaKnown RBP17.61■□□□□ 0.41
PPP4R3A-201ENST00000554308 SLIT2O94813 1529 aa17.61■□□□□ 0.41
PPP4R3A-201ENST00000554308 ATG9AQ7Z3C6 839 aa17.61■□□□□ 0.41
PPP4R3A-201ENST00000554308 CWC22Q9HCG8 908 aaKnown RBP17.61■□□□□ 0.41
PPP4R3A-201ENST00000554308 TUBGCP6Q96RT7 1819 aa17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 FAM177BA6PVY3 158 aa17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 KCNQ4P56696 695 aa17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 TRIM28Q13263 835 aaKnown RBP17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 NOL8Q76FK4 1167 aaKnown RBP17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 ZBTB38Q8NAP3 1195 aaPredicted RBP17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 RNF214Q8ND24 703 aa17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 FSD1Q9BTV5 496 aa17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 UPF3BQ9BZI7 483 aaKnown RBP17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 FAM182BQ5T319 152 aa17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 NLRP10Q86W26 655 aa17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 FAM227BQ96M60 508 aa17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 NOL7Q9UMY1 257 aaKnown RBP17.6■□□□□ 0.41
PPP4R3A-201ENST00000554308 PCCAP05165 728 aaPredicted RBP17.59■□□□□ 0.41
PPP4R3A-201ENST00000554308 IL6STP40189 918 aaPredicted RBP17.59■□□□□ 0.41
PPP4R3A-201ENST00000554308 CRKLP46109 303 aaKnown RBP17.59■□□□□ 0.41
PPP4R3A-201ENST00000554308 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.59■□□□□ 0.41
PPP4R3A-201ENST00000554308 DNAJC2Q99543 621 aaKnown RBP17.59■□□□□ 0.41
PPP4R3A-201ENST00000554308 TRMT112Q9UI30 125 aaKnown RBP17.59■□□□□ 0.41
PPP4R3A-201ENST00000554308 ITPK1Q13572 414 aa17.59■□□□□ 0.41
PPP4R3A-201ENST00000554308 NUP188Q5SRE5 1749 aa17.58■□□□□ 0.41
PPP4R3A-201ENST00000554308 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.41
PPP4R3A-201ENST00000554308 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.41
PPP4R3A-201ENST00000554308 RUFY2Q8WXA3 655 aa17.58■□□□□ 0.41
PPP4R3A-201ENST00000554308 EYA2O00167 538 aa17.58■□□□□ 0.4
PPP4R3A-201ENST00000554308 FOXD4L6Q3SYB3 417 aaPredicted RBP17.58■□□□□ 0.4
PPP4R3A-201ENST00000554308 FOXD4L3Q6VB84 417 aaPredicted RBP17.58■□□□□ 0.4
PPP4R3A-201ENST00000554308 TMX3Q96JJ7 454 aa17.58■□□□□ 0.4
PPP4R3A-201ENST00000554308 LSG1Q9H089 658 aaKnown RBP17.58■□□□□ 0.4
PPP4R3A-201ENST00000554308 USP21Q9UK80 565 aa17.58■□□□□ 0.4
PPP4R3A-201ENST00000554308 JCADQ9P266 1359 aa17.58■□□□□ 0.4
PPP4R3A-201ENST00000554308 IL15P40933 162 aaPredicted RBP17.57■□□□□ 0.4
PPP4R3A-201ENST00000554308 PTH1RQ03431 593 aa17.57■□□□□ 0.4
PPP4R3A-201ENST00000554308 CCDC87Q9NVE4 849 aa17.57■□□□□ 0.4
PPP4R3A-201ENST00000554308 NRAPQ86VF7 1730 aa17.57■□□□□ 0.4
PPP4R3A-201ENST00000554308 DOT1LQ8TEK3 1739 aa17.57■□□□□ 0.4
PPP4R3A-201ENST00000554308 HSPA4P34932 840 aa17.57■□□□□ 0.4
PPP4R3A-201ENST00000554308 HSP90AB3PQ58FF7 597 aa17.57■□□□□ 0.4
PPP4R3A-201ENST00000554308 LRSAM1Q6UWE0 723 aa17.57■□□□□ 0.4
PPP4R3A-201ENST00000554308 PTF1AQ7RTS3 328 aa17.57■□□□□ 0.4
PPP4R3A-201ENST00000554308 PDCL3Q9H2J4 239 aa17.57■□□□□ 0.4
PPP4R3A-201ENST00000554308 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
PPP4R3A-201ENST00000554308 PALLDQ8WX93 1383 aa17.56■□□□□ 0.4
PPP4R3A-201ENST00000554308 ATP5JP18859 108 aa17.56■□□□□ 0.4
PPP4R3A-201ENST00000554308 NMIQ13287 307 aaPredicted RBP17.56■□□□□ 0.4
PPP4R3A-201ENST00000554308 IFIT5Q13325 482 aaKnown RBP17.56■□□□□ 0.4
PPP4R3A-201ENST00000554308 VPS72Q15906 364 aa17.56■□□□□ 0.4
PPP4R3A-201ENST00000554308 RAD50Q92878 1312 aa17.56■□□□□ 0.4
PPP4R3A-201ENST00000554308 IRS4O14654 1257 aaPredicted RBP17.56■□□□□ 0.4
PPP4R3A-201ENST00000554308 CHGBP05060 677 aa17.56■□□□□ 0.4
PPP4R3A-201ENST00000554308 EIF5P55010 431 aaKnown RBP17.56■□□□□ 0.4
PPP4R3A-201ENST00000554308 ANAPC15P60006 121 aa17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 HS1BP3Q53T59 392 aa17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 RASEFQ8IZ41 740 aa17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 FAM13BQ9NYF5 915 aa17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 LRP6O75581 1613 aa17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 A0A0D9SFI3 127 aa17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 ZNF500O60304 480 aaPredicted RBP17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 DDX46Q7L014 1031 aaKnown RBP17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 GREM2Q9H772 168 aa17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 CEP126Q9P2H0 1117 aa17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 UBN2Q6ZU65 1347 aa17.55■□□□□ 0.4
PPP4R3A-201ENST00000554308 A0A1B0GUL7 405 aa17.54■□□□□ 0.4
PPP4R3A-201ENST00000554308 ZKSCAN5Q9Y2L8 839 aa17.54■□□□□ 0.4
PPP4R3A-201ENST00000554308 ERVV-1B6SEH8 477 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms