RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 BICDL1Q6ZP65 573 aa9.46□□□□□ -0.9
TDP1-209ENST00000554180 SYNE4Q8N205 404 aa9.46□□□□□ -0.9
TDP1-209ENST00000554180 CHMP3Q9Y3E7 222 aa9.46□□□□□ -0.9
TDP1-209ENST00000554180 TUBGCP6Q96RT7 1819 aa9.46□□□□□ -0.9
TDP1-209ENST00000554180 LRP5O75197 1615 aa9.45□□□□□ -0.9
TDP1-209ENST00000554180 HCLS1P14317 486 aaPredicted RBP9.45□□□□□ -0.9
TDP1-209ENST00000554180 IFIT5Q13325 482 aaKnown RBP9.45□□□□□ -0.9
TDP1-209ENST00000554180 OS9Q13438 667 aaPredicted RBP9.45□□□□□ -0.9
TDP1-209ENST00000554180 SF3B3Q15393 1217 aaKnown RBP9.45□□□□□ -0.9
TDP1-209ENST00000554180 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
TDP1-209ENST00000554180 ERFEQ4G0M1 354 aa9.45□□□□□ -0.9
TDP1-209ENST00000554180 NUTM1Q86Y26 1132 aa9.45□□□□□ -0.9
TDP1-209ENST00000554180 CNBD1Q8NA66 436 aa9.45□□□□□ -0.9
TDP1-209ENST00000554180 RHPN1Q8TCX5 695 aa9.45□□□□□ -0.9
TDP1-209ENST00000554180 LNPKQ9C0E8 428 aa9.45□□□□□ -0.9
TDP1-209ENST00000554180 PA2G4Q9UQ80 394 aaKnown RBP9.45□□□□□ -0.9
TDP1-209ENST00000554180 ABCC12Q96J65 1359 aa9.45□□□□□ -0.9
TDP1-209ENST00000554180 ANKRD18BA2A2Z9 1011 aa9.44□□□□□ -0.9
TDP1-209ENST00000554180 FAM177BA6PVY3 158 aa9.44□□□□□ -0.9
TDP1-209ENST00000554180 EYA2O00167 538 aa9.44□□□□□ -0.9
TDP1-209ENST00000554180 POLRMTO00411 1230 aaKnown RBP9.44□□□□□ -0.9
TDP1-209ENST00000554180 SERPINB2P05120 415 aa9.44□□□□□ -0.9
TDP1-209ENST00000554180 ITGA6P23229 1130 aa9.44□□□□□ -0.9
TDP1-209ENST00000554180 IL15P40933 162 aaPredicted RBP9.44□□□□□ -0.9
TDP1-209ENST00000554180 RGS3P49796 1198 aa9.44□□□□□ -0.9
TDP1-209ENST00000554180 ST5P78524 1137 aa9.44□□□□□ -0.9
TDP1-209ENST00000554180 SLC16A10Q8TF71 515 aa9.44□□□□□ -0.9
TDP1-209ENST00000554180 UPF1Q92900 1129 aaKnown RBP eCLIP9.44□□□□□ -0.9
TDP1-209ENST00000554180 GREM2Q9H772 168 aa9.44□□□□□ -0.9
TDP1-209ENST00000554180 DDX60Q8IY21 1712 aaKnown RBP9.44□□□□□ -0.9
TDP1-209ENST00000554180 MYH3P11055 1940 aa9.44□□□□□ -0.9
TDP1-209ENST00000554180 NPHP1O15259 732 aa9.43□□□□□ -0.9
TDP1-209ENST00000554180 MSH5O43196 834 aa9.43□□□□□ -0.9
TDP1-209ENST00000554180 PDE4AP27815 886 aa9.43□□□□□ -0.9
TDP1-209ENST00000554180 DDR1Q08345 913 aa9.43□□□□□ -0.9
TDP1-209ENST00000554180 TAF7LQ5H9L4 462 aa9.43□□□□□ -0.9
TDP1-209ENST00000554180 PRR5LQ6MZQ0 368 aa9.43□□□□□ -0.9
TDP1-209ENST00000554180 CLASRPQ8N2M8 674 aaKnown RBP9.43□□□□□ -0.9
TDP1-209ENST00000554180 NLRP3Q96P20 1036 aa9.43□□□□□ -0.9
TDP1-209ENST00000554180 CDC5LQ99459 802 aaKnown RBP9.43□□□□□ -0.9
TDP1-209ENST00000554180 GPR108Q9NPR9 543 aa9.43□□□□□ -0.9
TDP1-209ENST00000554180 NRXN2Q9P2S2 1712 aa9.42□□□□□ -0.9
TDP1-209ENST00000554180 AOX1Q06278 1338 aa9.42□□□□□ -0.9
TDP1-209ENST00000554180 SALL3Q9BXA9 1300 aa9.42□□□□□ -0.9
TDP1-209ENST00000554180 APBB1O00213 710 aa9.42□□□□□ -0.9
TDP1-209ENST00000554180 SASH1O94885 1247 aa9.42□□□□□ -0.9
TDP1-209ENST00000554180 CRY2Q49AN0 593 aa9.42□□□□□ -0.9
TDP1-209ENST00000554180 ATG9AQ7Z3C6 839 aa9.42□□□□□ -0.9
TDP1-209ENST00000554180 KLHDC4Q8TBB5 520 aa9.42□□□□□ -0.9
TDP1-209ENST00000554180 SIL1Q9H173 461 aa9.42□□□□□ -0.9
TDP1-209ENST00000554180 OSBPL3Q9H4L5 887 aa9.42□□□□□ -0.9
TDP1-209ENST00000554180 KLRG2A4D1S0 409 aaPredicted RBP9.41□□□□□ -0.9
TDP1-209ENST00000554180 SMARCA5O60264 1052 aaPredicted RBP9.41□□□□□ -0.9
TDP1-209ENST00000554180 MMP10P09238 476 aa9.41□□□□□ -0.9
TDP1-209ENST00000554180 MX1P20591 662 aa9.41□□□□□ -0.9
TDP1-209ENST00000554180 IGHMBP2P38935 993 aaKnown RBP9.41□□□□□ -0.9
TDP1-209ENST00000554180 BMP2KLQ5H9B9 411 aa9.41□□□□□ -0.9
TDP1-209ENST00000554180 LDHAL6AQ6ZMR3 332 aa9.41□□□□□ -0.9
TDP1-209ENST00000554180 SKAP1Q86WV1 359 aa9.41□□□□□ -0.9
TDP1-209ENST00000554180 PLEKHM2Q8IWE5 1019 aa9.41□□□□□ -0.9
TDP1-209ENST00000554180 IL1RAPL2Q9NP60 686 aa9.41□□□□□ -0.9
TDP1-209ENST00000554180 STAP2Q9UGK3 403 aa9.41□□□□□ -0.9
TDP1-209ENST00000554180 PARP3Q9Y6F1 533 aa9.41□□□□□ -0.9
TDP1-209ENST00000554180 TTC41PQ6P2S7 1318 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 MROH5Q6ZUA9 1318 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 PDE1AP54750 535 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 TFCP2Q12800 502 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 LRRC24Q50LG9 513 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 TNNI3KQ59H18 835 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 C3orf67Q6ZVT6 689 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 DDX46Q7L014 1031 aaKnown RBP9.4□□□□□ -0.9
TDP1-209ENST00000554180 ANKRD18AQ8IVF6 992 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 GPATCH3Q96I76 525 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 ZNF594Q96JF6 807 aaPredicted RBP9.4□□□□□ -0.9
TDP1-209ENST00000554180 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
TDP1-209ENST00000554180 MPHOSPH8Q99549 860 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 BRIP1Q9BX63 1249 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 CNNM1Q9NRU3 951 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 AKAP2Q9Y2D5 859 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 RIPOR2Q9Y4F9 1068 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 FPGT-TNNI3KV9GXZ4 949 aa9.4□□□□□ -0.9
TDP1-209ENST00000554180 ZNF609O15014 1411 aa9.39□□□□□ -0.91
TDP1-209ENST00000554180 TNRC6CQ9HCJ0 1690 aaKnown RBP9.39□□□□□ -0.91
TDP1-209ENST00000554180 IFIT2P09913 472 aaKnown RBP9.39□□□□□ -0.91
TDP1-209ENST00000554180 AACSQ86V21 672 aa9.39□□□□□ -0.91
TDP1-209ENST00000554180 OTUD7AQ8TE49 926 aaPredicted RBP9.39□□□□□ -0.91
TDP1-209ENST00000554180 EAF2Q96CJ1 260 aaPredicted RBP9.39□□□□□ -0.91
TDP1-209ENST00000554180 SEC31BQ9NQW1 1179 aa9.39□□□□□ -0.91
TDP1-209ENST00000554180 BSDC1Q9NW68 430 aaPredicted RBP9.39□□□□□ -0.91
TDP1-209ENST00000554180 ERC2O15083 957 aa9.38□□□□□ -0.91
TDP1-209ENST00000554180 HOXA10P31260 410 aaPredicted RBP9.38□□□□□ -0.91
TDP1-209ENST00000554180 PDE6BP35913 854 aa9.38□□□□□ -0.91
TDP1-209ENST00000554180 RPS8P62241 208 aaKnown RBP9.38□□□□□ -0.91
TDP1-209ENST00000554180 GRAPQ13588 217 aa9.38□□□□□ -0.91
TDP1-209ENST00000554180 METTL24Q5JXM2 366 aa9.38□□□□□ -0.91
TDP1-209ENST00000554180 TTC22Q5TAA0 569 aa9.38□□□□□ -0.91
TDP1-209ENST00000554180 MSL1Q68DK7 614 aa9.38□□□□□ -0.91
TDP1-209ENST00000554180 TMC4Q7Z404 712 aa9.38□□□□□ -0.91
TDP1-209ENST00000554180 C16orf71Q8IYS4 520 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms