RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 LRRC37AA6NMS7 1700 aa15.23■□□□□ 0.03
TUBB3-204ENST00000554116 PAXIP1Q6ZW49 1069 aaPredicted RBP15.23■□□□□ 0.03
TUBB3-204ENST00000554116 COPS6Q7L5N1 327 aa15.23■□□□□ 0.03
TUBB3-204ENST00000554116 SAPCD2Q86UD0 394 aa15.23■□□□□ 0.03
TUBB3-204ENST00000554116 SP8Q8IXZ3 490 aa15.23■□□□□ 0.03
TUBB3-204ENST00000554116 GLIS2Q9BZE0 524 aaPredicted RBP15.23■□□□□ 0.03
TUBB3-204ENST00000554116 POLR2AP24928 1970 aaKnown RBP15.23■□□□□ 0.03
TUBB3-204ENST00000554116 CASP8AP2Q9UKL3 1982 aa15.22■□□□□ 0.03
TUBB3-204ENST00000554116 RIPK4P57078 832 aa15.22■□□□□ 0.03
TUBB3-204ENST00000554116 KIAA2012Q0VF49 1180 aa15.22■□□□□ 0.03
TUBB3-204ENST00000554116 DLK2Q6UY11 383 aa15.22■□□□□ 0.03
TUBB3-204ENST00000554116 TRPM4Q8TD43 1214 aa15.22■□□□□ 0.03
TUBB3-204ENST00000554116 XAGE3Q8WTP9 111 aa15.22■□□□□ 0.03
TUBB3-204ENST00000554116 NECTIN2Q92692 538 aa15.22■□□□□ 0.03
TUBB3-204ENST00000554116 ZNF428Q96B54 188 aa15.22■□□□□ 0.03
TUBB3-204ENST00000554116 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
TUBB3-204ENST00000554116 BBOX1O75936 387 aa15.21■□□□□ 0.03
TUBB3-204ENST00000554116 RAD17O75943 681 aa15.21■□□□□ 0.03
TUBB3-204ENST00000554116 TMPOP42166 694 aaKnown RBP15.21■□□□□ 0.03
TUBB3-204ENST00000554116 TCIRG1Q13488 830 aa15.21■□□□□ 0.03
TUBB3-204ENST00000554116 ZIC5Q96T25 663 aa15.21■□□□□ 0.03
TUBB3-204ENST00000554116 NEFMP07197 916 aa15.2■□□□□ 0.02
TUBB3-204ENST00000554116 AIMP1Q12904 312 aaKnown RBP15.2■□□□□ 0.02
TUBB3-204ENST00000554116 MPNDQ8N594 471 aa15.2■□□□□ 0.02
TUBB3-204ENST00000554116 BABAM1Q9NWV8 329 aa15.2■□□□□ 0.02
TUBB3-204ENST00000554116 MAPK8IP3Q9UPT6 1336 aa15.19■□□□□ 0.02
TUBB3-204ENST00000554116 CHL1O00533 1208 aa15.19■□□□□ 0.02
TUBB3-204ENST00000554116 CA12O43570 354 aa15.19■□□□□ 0.02
TUBB3-204ENST00000554116 CELF2O95319 508 aaKnown RBP15.19■□□□□ 0.02
TUBB3-204ENST00000554116 EGFRP00533 1210 aa15.19■□□□□ 0.02
TUBB3-204ENST00000554116 MAP2K2P36507 400 aa15.19■□□□□ 0.02
TUBB3-204ENST00000554116 GRM1Q13255 1194 aa15.19■□□□□ 0.02
TUBB3-204ENST00000554116 GRAPQ13588 217 aa15.19■□□□□ 0.02
TUBB3-204ENST00000554116 CIAPIN1Q6FI81 312 aa15.19■□□□□ 0.02
TUBB3-204ENST00000554116 DPP8Q6V1X1 898 aaPredicted RBP15.19■□□□□ 0.02
TUBB3-204ENST00000554116 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
TUBB3-204ENST00000554116 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
TUBB3-204ENST00000554116 HHIPL1Q96JK4 782 aa15.18■□□□□ 0.02
TUBB3-204ENST00000554116 KCNQ5Q9NR82 932 aa15.18■□□□□ 0.02
TUBB3-204ENST00000554116 TRMT112Q9UI30 125 aaKnown RBP15.18■□□□□ 0.02
TUBB3-204ENST00000554116 TRIM35Q9UPQ4 493 aa15.18■□□□□ 0.02
TUBB3-204ENST00000554116 SCN9AQ15858 1988 aa15.18■□□□□ 0.02
TUBB3-204ENST00000554116 ZC3H15Q8WU90 426 aaKnown RBP15.17■□□□□ 0.02
TUBB3-204ENST00000554116 CELF1Q92879 486 aaKnown RBP15.17■□□□□ 0.02
TUBB3-204ENST00000554116 ISCA1Q9BUE6 129 aa15.17■□□□□ 0.02
TUBB3-204ENST00000554116 CNOT7Q9UIV1 285 aaKnown RBP15.17■□□□□ 0.02
TUBB3-204ENST00000554116 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
TUBB3-204ENST00000554116 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
TUBB3-204ENST00000554116 CDHR2Q9BYE9 1310 aa15.17■□□□□ 0.02
TUBB3-204ENST00000554116 HSP90AB3PQ58FF7 597 aa15.16■□□□□ 0.02
TUBB3-204ENST00000554116 PNNQ9H307 717 aaKnown RBP15.16■□□□□ 0.02
TUBB3-204ENST00000554116 CHPF2Q9P2E5 772 aa15.16■□□□□ 0.02
TUBB3-204ENST00000554116 POLLQ9UGP5 575 aa15.16■□□□□ 0.02
TUBB3-204ENST00000554116 PSMD14O00487 310 aa15.15■□□□□ 0.02
TUBB3-204ENST00000554116 DDX10Q13206 875 aaKnown RBP15.15■□□□□ 0.02
TUBB3-204ENST00000554116 SF3B3Q15393 1217 aaKnown RBP15.15■□□□□ 0.02
TUBB3-204ENST00000554116 DDX46Q7L014 1031 aaKnown RBP15.15■□□□□ 0.02
TUBB3-204ENST00000554116 SAMD7Q7Z3H4 446 aa15.15■□□□□ 0.02
TUBB3-204ENST00000554116 MICALL2Q8IY33 904 aa15.15■□□□□ 0.02
TUBB3-204ENST00000554116 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
TUBB3-204ENST00000554116 PDE4DIPQ5VU43 2346 aa15.15■□□□□ 0.02
TUBB3-204ENST00000554116 RTL9Q8NET4 1388 aa15.14■□□□□ 0.01
TUBB3-204ENST00000554116 TNIP1Q15025 636 aa15.14■□□□□ 0.01
TUBB3-204ENST00000554116 USP48Q86UV5 1035 aa15.14■□□□□ 0.01
TUBB3-204ENST00000554116 CCDC146Q8IYE0 955 aa15.14■□□□□ 0.01
TUBB3-204ENST00000554116 FAM89AQ96GI7 184 aa15.14■□□□□ 0.01
TUBB3-204ENST00000554116 BCL2L13Q9BXK5 485 aa15.14■□□□□ 0.01
TUBB3-204ENST00000554116 MCOLN1Q9GZU1 580 aa15.14■□□□□ 0.01
TUBB3-204ENST00000554116 FAM155AB1AL88 458 aaPredicted RBP15.13■□□□□ 0.01
TUBB3-204ENST00000554116 ATP5J2-PTCD1G3V325 749 aa15.13■□□□□ 0.01
TUBB3-204ENST00000554116 BRPF1P55201 1214 aaPredicted RBP15.13■□□□□ 0.01
TUBB3-204ENST00000554116 GPSM2P81274 684 aa15.13■□□□□ 0.01
TUBB3-204ENST00000554116 CDC37L1Q7L3B6 337 aa15.13■□□□□ 0.01
TUBB3-204ENST00000554116 PLBD2Q8NHP8 589 aa15.13■□□□□ 0.01
TUBB3-204ENST00000554116 DPF2Q92785 391 aa15.13■□□□□ 0.01
TUBB3-204ENST00000554116 TMX4Q9H1E5 349 aaPredicted RBP15.13■□□□□ 0.01
TUBB3-204ENST00000554116 ZNF408Q9H9D4 720 aa15.13■□□□□ 0.01
TUBB3-204ENST00000554116 DBNDD1Q9H9R9 158 aa15.13■□□□□ 0.01
TUBB3-204ENST00000554116 ZEB1P37275 1124 aaPredicted RBP15.12■□□□□ 0.01
TUBB3-204ENST00000554116 NEUROD2Q15784 382 aa15.12■□□□□ 0.01
TUBB3-204ENST00000554116 ANKRD13DQ6ZTN6 518 aa15.12■□□□□ 0.01
TUBB3-204ENST00000554116 RIMBP2O15034 1052 aa15.11■□□□□ 0.01
TUBB3-204ENST00000554116 TRIM28Q13263 835 aaKnown RBP15.11■□□□□ 0.01
TUBB3-204ENST00000554116 WASHC4Q2M389 1173 aa15.11■□□□□ 0.01
TUBB3-204ENST00000554116 TBC1D10BQ4KMP7 808 aaPredicted RBP15.11■□□□□ 0.01
TUBB3-204ENST00000554116 TMC4Q7Z404 712 aa15.11■□□□□ 0.01
TUBB3-204ENST00000554116 NSFL1CQ9UNZ2 370 aaKnown RBP15.11■□□□□ 0.01
TUBB3-204ENST00000554116 ASTN2O75129 1339 aaPredicted RBP15.11■□□□□ 0.01
TUBB3-204ENST00000554116 HTTP42858 3142 aa15.1■□□□□ 0.01
TUBB3-204ENST00000554116 H7C1D1 291 aa15.1■□□□□ 0.01
TUBB3-204ENST00000554116 HUNKP57058 714 aa15.1■□□□□ 0.01
TUBB3-204ENST00000554116 RALBP1Q15311 655 aa15.1■□□□□ 0.01
TUBB3-204ENST00000554116 DOK7Q18PE1 504 aa15.1■□□□□ 0.01
TUBB3-204ENST00000554116 RTL5Q5HYW3 569 aaPredicted RBP15.1■□□□□ 0.01
TUBB3-204ENST00000554116 TBC1D16Q8TBP0 767 aa15.1■□□□□ 0.01
TUBB3-204ENST00000554116 PSME4Q14997 1843 aa15.09■□□□□ 0.01
TUBB3-204ENST00000554116 ADM5C9JUS6 153 aa15.09■□□□□ 0.01
TUBB3-204ENST00000554116 LMOD3Q0VAK6 560 aa15.09■□□□□ 0.01
TUBB3-204ENST00000554116 DGKZQ13574 1117 aa15.09■□□□□ 0.01
TUBB3-204ENST00000554116 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms