RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
TMEM55B-205ENST00000554028 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 APBB1O00213 710 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 CSF1RP07333 972 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 HCLS1P14317 486 aaPredicted RBP12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 TM4SF1P30408 202 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 ST5P78524 1137 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 NUCB1Q02818 461 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 CCDC152Q4G0S7 254 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 SLC10A5Q5PT55 438 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 CHD1LQ86WJ1 897 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 CNBD1Q8NA66 436 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 LRRCC1Q9C099 1032 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 ANO8Q9HCE9 1232 aaPredicted RBP12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 NOP58Q9Y2X3 529 aaKnown RBP12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 PARP3Q9Y6F1 533 aa12.94□□□□□ -0.34
TMEM55B-205ENST00000554028 SERPINB2P05120 415 aa12.93□□□□□ -0.34
TMEM55B-205ENST00000554028 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
TMEM55B-205ENST00000554028 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
TMEM55B-205ENST00000554028 TTLL11Q8NHH1 800 aa12.93□□□□□ -0.34
TMEM55B-205ENST00000554028 KIF1BPQ96EK5 621 aa12.93□□□□□ -0.34
TMEM55B-205ENST00000554028 COPRSQ9NQ92 184 aa12.93□□□□□ -0.34
TMEM55B-205ENST00000554028 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
TMEM55B-205ENST00000554028 HAX1O00165 279 aa12.92□□□□□ -0.34
TMEM55B-205ENST00000554028 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
TMEM55B-205ENST00000554028 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
TMEM55B-205ENST00000554028 NUP98P52948 1817 aa12.92□□□□□ -0.34
TMEM55B-205ENST00000554028 ITGA6P23229 1130 aa12.91□□□□□ -0.34
TMEM55B-205ENST00000554028 CCDC85AQ96PX6 553 aaPredicted RBP12.91□□□□□ -0.34
TMEM55B-205ENST00000554028 LNPKQ9C0E8 428 aa12.91□□□□□ -0.34
TMEM55B-205ENST00000554028 BCL11AQ9H165 835 aa12.91□□□□□ -0.34
TMEM55B-205ENST00000554028 SCN7AQ01118 1682 aa12.91□□□□□ -0.34
TMEM55B-205ENST00000554028 BCORQ6W2J9 1755 aa12.91□□□□□ -0.34
TMEM55B-205ENST00000554028 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
TMEM55B-205ENST00000554028 EP400Q96L91 3159 aa12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 RGS3P49796 1198 aa12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 PTPN12Q05209 780 aaKnown RBP12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 SF3B3Q15393 1217 aaKnown RBP12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 CLASRPQ8N2M8 674 aaKnown RBP12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 RHPN1Q8TCX5 695 aa12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 CDC5LQ99459 802 aaKnown RBP12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 SIL1Q9H173 461 aa12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 GREM2Q9H772 168 aa12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 PA2G4Q9UQ80 394 aaKnown RBP12.9□□□□□ -0.34
TMEM55B-205ENST00000554028 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 EYA2O00167 538 aa12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 CIAO1O76071 339 aa12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 MMP10P09238 476 aa12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 IGHMBP2P38935 993 aaKnown RBP12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 IL15P40933 162 aaPredicted RBP12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 RFX5P48382 616 aaPredicted RBP12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 PRR5LQ6MZQ0 368 aa12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 LDHAL6AQ6ZMR3 332 aa12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 MPHOSPH8Q99549 860 aa12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
TMEM55B-205ENST00000554028 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
TMEM55B-205ENST00000554028 DDX46Q7L014 1031 aaKnown RBP12.88□□□□□ -0.35
TMEM55B-205ENST00000554028 KLHDC4Q8TBB5 520 aa12.88□□□□□ -0.35
TMEM55B-205ENST00000554028 RPGRQ92834 1020 aaKnown RBP12.88□□□□□ -0.35
TMEM55B-205ENST00000554028 CEP126Q9P2H0 1117 aa12.88□□□□□ -0.35
TMEM55B-205ENST00000554028 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
TMEM55B-205ENST00000554028 RTL9Q8NET4 1388 aa12.88□□□□□ -0.35
TMEM55B-205ENST00000554028 SMARCA5O60264 1052 aaPredicted RBP12.87□□□□□ -0.35
TMEM55B-205ENST00000554028 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
TMEM55B-205ENST00000554028 DDR1Q08345 913 aa12.87□□□□□ -0.35
TMEM55B-205ENST00000554028 ANKRD18AQ8IVF6 992 aa12.87□□□□□ -0.35
TMEM55B-205ENST00000554028 GPATCH3Q96I76 525 aa12.87□□□□□ -0.35
TMEM55B-205ENST00000554028 ZNF594Q96JF6 807 aaPredicted RBP12.87□□□□□ -0.35
TMEM55B-205ENST00000554028 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
TMEM55B-205ENST00000554028 IL1RAPL2Q9NP60 686 aa12.87□□□□□ -0.35
TMEM55B-205ENST00000554028 C4AP0C0L4 1744 aa12.87□□□□□ -0.35
TMEM55B-205ENST00000554028 PDE6BP35913 854 aa12.86□□□□□ -0.35
TMEM55B-205ENST00000554028 CCDC24Q8N4L8 307 aa12.86□□□□□ -0.35
TMEM55B-205ENST00000554028 RBM17Q96I25 401 aaKnown RBP12.86□□□□□ -0.35
TMEM55B-205ENST00000554028 AKAP2Q9Y2D5 859 aa12.86□□□□□ -0.35
TMEM55B-205ENST00000554028 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
TMEM55B-205ENST00000554028 ABCC12Q96J65 1359 aa12.85□□□□□ -0.35
TMEM55B-205ENST00000554028 POLD1P28340 1107 aa12.85□□□□□ -0.35
TMEM55B-205ENST00000554028 METTL24Q5JXM2 366 aa12.85□□□□□ -0.35
TMEM55B-205ENST00000554028 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
TMEM55B-205ENST00000554028 RIC1Q4ADV7 1423 aa12.85□□□□□ -0.35
TMEM55B-205ENST00000554028 MROH5Q6ZUA9 1318 aa12.85□□□□□ -0.35
TMEM55B-205ENST00000554028 SASH1O94885 1247 aa12.84□□□□□ -0.35
TMEM55B-205ENST00000554028 RPS8P62241 208 aaKnown RBP12.84□□□□□ -0.35
TMEM55B-205ENST00000554028 TFCP2Q12800 502 aa12.84□□□□□ -0.35
TMEM55B-205ENST00000554028 R3HDM1Q15032 1099 aaKnown RBP12.84□□□□□ -0.35
TMEM55B-205ENST00000554028 LRRC24Q50LG9 513 aa12.84□□□□□ -0.35
TMEM55B-205ENST00000554028 AACSQ86V21 672 aa12.84□□□□□ -0.35
TMEM55B-205ENST00000554028 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
TMEM55B-205ENST00000554028 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
TMEM55B-205ENST00000554028 MX1P20591 662 aa12.83□□□□□ -0.36
TMEM55B-205ENST00000554028 PDE4AP27815 886 aa12.83□□□□□ -0.36
TMEM55B-205ENST00000554028 ATG9AQ7Z3C6 839 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms