RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 AOC3Q16853 763 aa11.72□□□□□ -0.53
SDR39U1-207ENST00000553937 DDX46Q7L014 1031 aaKnown RBP11.72□□□□□ -0.53
SDR39U1-207ENST00000553937 GRAPLQ8TC17 118 aaPredicted RBP11.72□□□□□ -0.53
SDR39U1-207ENST00000553937 GJA3Q9Y6H8 435 aa11.72□□□□□ -0.53
SDR39U1-207ENST00000553937 BBOX1O75936 387 aa11.71□□□□□ -0.53
SDR39U1-207ENST00000553937 RTL5Q5HYW3 569 aaPredicted RBP11.71□□□□□ -0.53
SDR39U1-207ENST00000553937 RIC3Q7Z5B4 369 aa11.71□□□□□ -0.53
SDR39U1-207ENST00000553937 SP8Q8IXZ3 490 aa11.71□□□□□ -0.53
SDR39U1-207ENST00000553937 NIM1KQ8IY84 436 aa11.71□□□□□ -0.53
SDR39U1-207ENST00000553937 SCN9AQ15858 1988 aa11.7□□□□□ -0.54
SDR39U1-207ENST00000553937 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
SDR39U1-207ENST00000553937 DPP8Q6V1X1 898 aaPredicted RBP11.7□□□□□ -0.54
SDR39U1-207ENST00000553937 MPNDQ8N594 471 aa11.7□□□□□ -0.54
SDR39U1-207ENST00000553937 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
SDR39U1-207ENST00000553937 SUPT20HQ8NEM7 779 aa11.7□□□□□ -0.54
SDR39U1-207ENST00000553937 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
SDR39U1-207ENST00000553937 RTFDC1Q9BY42 306 aaPredicted RBP11.7□□□□□ -0.54
SDR39U1-207ENST00000553937 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
SDR39U1-207ENST00000553937 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
SDR39U1-207ENST00000553937 IRS4O14654 1257 aaPredicted RBP11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 ITGBL1O95965 494 aaPredicted RBP11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 LMOD1P29536 600 aaPredicted RBP11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 SCNN1DP51172 638 aa11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 TRIM28Q13263 835 aaKnown RBP11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 SF3B3Q15393 1217 aaKnown RBP11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 CCDC27Q2M243 656 aa11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 CCDC30Q5VVM6 783 aa11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 PNMA8AQ86V59 439 aaPredicted RBP11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 WWC1Q8IX03 1113 aa11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 CELF1Q92879 486 aaKnown RBP11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 MYD88Q99836 296 aa11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 VPS33BQ9H267 617 aa11.69□□□□□ -0.54
SDR39U1-207ENST00000553937 POLR2AP24928 1970 aaKnown RBP11.68□□□□□ -0.54
SDR39U1-207ENST00000553937 EPS15P42566 896 aa11.68□□□□□ -0.54
SDR39U1-207ENST00000553937 KIAA2012Q0VF49 1180 aa11.68□□□□□ -0.54
SDR39U1-207ENST00000553937 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
SDR39U1-207ENST00000553937 MAP1SQ66K74 1059 aaPredicted RBP11.68□□□□□ -0.54
SDR39U1-207ENST00000553937 TMC4Q7Z404 712 aa11.68□□□□□ -0.54
SDR39U1-207ENST00000553937 MKRN1Q9UHC7 482 aaKnown RBP11.68□□□□□ -0.54
SDR39U1-207ENST00000553937 A0A1B0GUL6 1792 aa11.68□□□□□ -0.54
SDR39U1-207ENST00000553937 CCER2I3L3R5 266 aa11.67□□□□□ -0.54
SDR39U1-207ENST00000553937 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
SDR39U1-207ENST00000553937 CXCL9Q07325 125 aa11.67□□□□□ -0.54
SDR39U1-207ENST00000553937 ZBTB38Q8NAP3 1195 aaPredicted RBP11.67□□□□□ -0.54
SDR39U1-207ENST00000553937 CCDC191Q8NCU4 936 aa11.67□□□□□ -0.54
SDR39U1-207ENST00000553937 METTL22Q9BUU2 404 aaPredicted RBP11.67□□□□□ -0.54
SDR39U1-207ENST00000553937 ZNRF3Q9ULT6 936 aa11.67□□□□□ -0.54
SDR39U1-207ENST00000553937 ZNF646O15015 1829 aaPredicted RBP11.67□□□□□ -0.54
SDR39U1-207ENST00000553937 TMEM88BA6NKF7 163 aa11.66□□□□□ -0.54
SDR39U1-207ENST00000553937 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
SDR39U1-207ENST00000553937 CNTROBQ8N137 903 aa11.66□□□□□ -0.54
SDR39U1-207ENST00000553937 CHMP4AQ9BY43 222 aa11.66□□□□□ -0.54
SDR39U1-207ENST00000553937 CWC25Q9NXE8 425 aaPredicted RBP11.66□□□□□ -0.54
SDR39U1-207ENST00000553937 NSFL1CQ9UNZ2 370 aaKnown RBP11.66□□□□□ -0.54
SDR39U1-207ENST00000553937 MAP3K2Q9Y2U5 619 aa11.66□□□□□ -0.54
SDR39U1-207ENST00000553937 THSD7BQ9C0I4 1608 aa11.66□□□□□ -0.54
SDR39U1-207ENST00000553937 CNTNAP1P78357 1384 aa11.66□□□□□ -0.54
SDR39U1-207ENST00000553937 IL16Q14005 1332 aa11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 RAD17O75943 681 aa11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 PCCAP05165 728 aaPredicted RBP11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 HSPA1AP0DMV8 641 aaKnown RBP11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 HSPA1BP0DMV9 641 aaKnown RBP11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 CIAPIN1Q6FI81 312 aa11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 USP50Q70EL3 339 aaPredicted RBP11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 JARID2Q92833 1246 aaPredicted RBP11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 STK31Q9BXU1 1019 aa11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 SEC31BQ9NQW1 1179 aa11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 GPRC5DQ9NZD1 345 aa11.65□□□□□ -0.54
SDR39U1-207ENST00000553937 FANCIQ9NVI1 1328 aa11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 PI4KAP2A4QPH2 592 aa11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 YDJCA8MPS7 323 aa11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 GMPSP49915 693 aaPredicted RBP11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 GPSM2P81274 684 aa11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 NCBP3Q53F19 620 aaKnown RBP11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 KSR2Q6VAB6 950 aa11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 G2E3Q7L622 706 aa11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 PI4KAP1Q8N8J0 262 aa11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 CCDC85AQ96PX6 553 aaPredicted RBP11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 ADARB2Q9NS39 739 aaKnown RBP11.64□□□□□ -0.55
SDR39U1-207ENST00000553937 CDHR2Q9BYE9 1310 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 C6orf229H3BNL8 230 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 RIMBP2O15034 1052 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 PDE8AO60658 829 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 IGKV5-2P06315 115 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 HSP90B1P14625 803 aaKnown RBP11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 RPS8P62241 208 aaKnown RBP11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 FMR1Q06787 632 aaKnown RBP eCLIP11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 TNIP1Q15025 636 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 WASHC4Q2M389 1173 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 CCDC152Q4G0S7 254 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 GPR101Q96P66 508 aaPredicted RBP11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 BCL2L13Q9BXK5 485 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 DBNDD1Q9H9R9 158 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 POLLQ9UGP5 575 aa11.63□□□□□ -0.55
SDR39U1-207ENST00000553937 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
SDR39U1-207ENST00000553937 NEXNQ0ZGT2 675 aa11.62□□□□□ -0.55
SDR39U1-207ENST00000553937 CWF19L2Q2TBE0 894 aaKnown RBP11.62□□□□□ -0.55
SDR39U1-207ENST00000553937 COL13A1Q5TAT6 717 aaPredicted RBP11.62□□□□□ -0.55
SDR39U1-207ENST00000553937 TBC1D16Q8TBP0 767 aa11.62□□□□□ -0.55
SDR39U1-207ENST00000553937 SHTN1A0MZ66 631 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms