RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 RPAP2Q8IXW5 612 aaPredicted RBP17.03■□□□□ 0.32
PSMC6-205ENST00000553899 SUCLG2Q96I99 432 aa17.03■□□□□ 0.32
PSMC6-205ENST00000553899 CRAMP1Q96RY5 1269 aa17.03■□□□□ 0.32
PSMC6-205ENST00000553899 KIAA1551Q9HCM1 1747 aa17.03■□□□□ 0.32
PSMC6-205ENST00000553899 TNRC6CQ9HCJ0 1690 aaKnown RBP17.03■□□□□ 0.32
PSMC6-205ENST00000553899 RTL5Q5HYW3 569 aaPredicted RBP17.02■□□□□ 0.32
PSMC6-205ENST00000553899 ERICH6BQ5W0A0 696 aa17.02■□□□□ 0.32
PSMC6-205ENST00000553899 TMC4Q7Z404 712 aa17.02■□□□□ 0.32
PSMC6-205ENST00000553899 MASTLQ96GX5 879 aa17.02■□□□□ 0.32
PSMC6-205ENST00000553899 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.32
PSMC6-205ENST00000553899 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
PSMC6-205ENST00000553899 RPGRQ92834 1020 aaKnown RBP17.01■□□□□ 0.31
PSMC6-205ENST00000553899 PPP1R1BQ9UD71 204 aaPredicted RBP17.01■□□□□ 0.31
PSMC6-205ENST00000553899 FBXO3Q9UK99 471 aa17.01■□□□□ 0.31
PSMC6-205ENST00000553899 LRRFIP2Q9Y608 721 aaKnown RBP17.01■□□□□ 0.31
PSMC6-205ENST00000553899 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
PSMC6-205ENST00000553899 BBOX1O75936 387 aa17■□□□□ 0.31
PSMC6-205ENST00000553899 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
PSMC6-205ENST00000553899 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
PSMC6-205ENST00000553899 CNKSR1Q969H4 720 aa17■□□□□ 0.31
PSMC6-205ENST00000553899 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
PSMC6-205ENST00000553899 COL11A2P13942 1736 aaPredicted RBP16.99■□□□□ 0.31
PSMC6-205ENST00000553899 KCNA3P22001 575 aa16.99■□□□□ 0.31
PSMC6-205ENST00000553899 IFIT5Q13325 482 aaKnown RBP16.99■□□□□ 0.31
PSMC6-205ENST00000553899 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
PSMC6-205ENST00000553899 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
PSMC6-205ENST00000553899 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
PSMC6-205ENST00000553899 C2CD5Q86YS7 1000 aa16.99■□□□□ 0.31
PSMC6-205ENST00000553899 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
PSMC6-205ENST00000553899 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
PSMC6-205ENST00000553899 CDC5LQ99459 802 aaKnown RBP16.99■□□□□ 0.31
PSMC6-205ENST00000553899 ATP8B2P98198 1209 aa16.98■□□□□ 0.31
PSMC6-205ENST00000553899 C3orf67Q6ZVT6 689 aa16.98■□□□□ 0.31
PSMC6-205ENST00000553899 SSH3Q8TE77 659 aa16.98■□□□□ 0.31
PSMC6-205ENST00000553899 SYT17Q9BSW7 474 aa16.98■□□□□ 0.31
PSMC6-205ENST00000553899 FHDC1Q9C0D6 1143 aaPredicted RBP16.98■□□□□ 0.31
PSMC6-205ENST00000553899 ANKRD18BA2A2Z9 1011 aa16.97■□□□□ 0.31
PSMC6-205ENST00000553899 NEFLP07196 543 aa16.97■□□□□ 0.31
PSMC6-205ENST00000553899 CCDC24Q8N4L8 307 aa16.97■□□□□ 0.31
PSMC6-205ENST00000553899 GREM2Q9H772 168 aa16.97■□□□□ 0.31
PSMC6-205ENST00000553899 PIM2Q9P1W9 311 aa16.97■□□□□ 0.31
PSMC6-205ENST00000553899 HMMRO75330 724 aa16.96■□□□□ 0.31
PSMC6-205ENST00000553899 ITGA6P23229 1130 aa16.96■□□□□ 0.31
PSMC6-205ENST00000553899 RPS8P62241 208 aaKnown RBP16.96■□□□□ 0.31
PSMC6-205ENST00000553899 GRAPQ13588 217 aa16.96■□□□□ 0.31
PSMC6-205ENST00000553899 POLA2Q14181 598 aa16.96■□□□□ 0.31
PSMC6-205ENST00000553899 CC2D2BQ6DHV5 1058 aa16.96■□□□□ 0.31
PSMC6-205ENST00000553899 CEP85Q6P2H3 762 aa16.96■□□□□ 0.31
PSMC6-205ENST00000553899 TTLL6Q8N841 843 aa16.96■□□□□ 0.31
PSMC6-205ENST00000553899 GRAPLQ8TC17 118 aaPredicted RBP16.96■□□□□ 0.31
PSMC6-205ENST00000553899 COPRSQ9NQ92 184 aa16.96■□□□□ 0.31
PSMC6-205ENST00000553899 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
PSMC6-205ENST00000553899 DPEP1P16444 411 aa16.95■□□□□ 0.3
PSMC6-205ENST00000553899 BSDC1Q9NW68 430 aaPredicted RBP16.95■□□□□ 0.3
PSMC6-205ENST00000553899 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
PSMC6-205ENST00000553899 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
PSMC6-205ENST00000553899 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
PSMC6-205ENST00000553899 SOGA3Q5TF21 947 aa16.94■□□□□ 0.3
PSMC6-205ENST00000553899 ANKRD18AQ8IVF6 992 aa16.94■□□□□ 0.3
PSMC6-205ENST00000553899 EXOC6Q8TAG9 804 aa16.94■□□□□ 0.3
PSMC6-205ENST00000553899 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
PSMC6-205ENST00000553899 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
PSMC6-205ENST00000553899 CIAO1O76071 339 aa16.93■□□□□ 0.3
PSMC6-205ENST00000553899 CHRNA5P30532 468 aa16.93■□□□□ 0.3
PSMC6-205ENST00000553899 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
PSMC6-205ENST00000553899 HDAC1Q13547 482 aaPredicted RBP16.93■□□□□ 0.3
PSMC6-205ENST00000553899 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
PSMC6-205ENST00000553899 SP8Q8IXZ3 490 aa16.93■□□□□ 0.3
PSMC6-205ENST00000553899 C7orf43Q8WVR3 580 aa16.93■□□□□ 0.3
PSMC6-205ENST00000553899 NOP58Q9Y2X3 529 aaKnown RBP16.93■□□□□ 0.3
PSMC6-205ENST00000553899 PTPN12Q05209 780 aaKnown RBP16.92■□□□□ 0.3
PSMC6-205ENST00000553899 HSP90AB4PQ58FF6 505 aa16.92■□□□□ 0.3
PSMC6-205ENST00000553899 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
PSMC6-205ENST00000553899 ZNF622Q969S3 477 aaKnown RBP eCLIP16.92■□□□□ 0.3
PSMC6-205ENST00000553899 ATP6V0A2Q9Y487 856 aa16.92■□□□□ 0.3
PSMC6-205ENST00000553899 SLX4Q8IY92 1834 aa16.91■□□□□ 0.3
PSMC6-205ENST00000553899 PNMA6EA0A0J9YXQ4 647 aa16.91■□□□□ 0.3
PSMC6-205ENST00000553899 SIRT2Q8IXJ6 389 aa16.91■□□□□ 0.3
PSMC6-205ENST00000553899 MPHOSPH8Q99549 860 aa16.91■□□□□ 0.3
PSMC6-205ENST00000553899 TMX4Q9H1E5 349 aaPredicted RBP16.91■□□□□ 0.3
PSMC6-205ENST00000553899 SEC31BQ9NQW1 1179 aa16.91■□□□□ 0.3
PSMC6-205ENST00000553899 CHMP3Q9Y3E7 222 aa16.91■□□□□ 0.3
PSMC6-205ENST00000553899 PCDHB15Q9Y5E8 787 aa16.91■□□□□ 0.3
PSMC6-205ENST00000553899 TAF7LQ5H9L4 462 aa16.9■□□□□ 0.3
PSMC6-205ENST00000553899 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
PSMC6-205ENST00000553899 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
PSMC6-205ENST00000553899 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
PSMC6-205ENST00000553899 C1orf115Q9H7X2 142 aa16.9■□□□□ 0.3
PSMC6-205ENST00000553899 RIPOR2Q9Y4F9 1068 aa16.9■□□□□ 0.3
PSMC6-205ENST00000553899 TAF1P21675 1872 aa16.9■□□□□ 0.3
PSMC6-205ENST00000553899 GOLGB1Q14789 3259 aaKnown RBP16.89■□□□□ 0.29
PSMC6-205ENST00000553899 PPEF1O14829 653 aaPredicted RBP16.89■□□□□ 0.29
PSMC6-205ENST00000553899 IL15P40933 162 aaPredicted RBP16.89■□□□□ 0.29
PSMC6-205ENST00000553899 ANKRD2Q9GZV1 360 aa16.89■□□□□ 0.29
PSMC6-205ENST00000553899 PODXL2Q9NZ53 605 aa16.89■□□□□ 0.29
PSMC6-205ENST00000553899 MROH5Q6ZUA9 1318 aa16.89■□□□□ 0.29
PSMC6-205ENST00000553899 EYA2O00167 538 aa16.88■□□□□ 0.29
PSMC6-205ENST00000553899 ERC1Q8IUD2 1116 aa16.88■□□□□ 0.29
PSMC6-205ENST00000553899 RTKN2Q8IZC4 609 aa16.88■□□□□ 0.29
PSMC6-205ENST00000553899 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms