RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 ATP6V1DQ9Y5K8 247 aa11.07□□□□□ -0.64
PRKCH-209ENST00000553889 BCL9O00512 1426 aa11.07□□□□□ -0.64
PRKCH-209ENST00000553889 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-209ENST00000553889 A0A0D9SFI3 127 aa11.06□□□□□ -0.64
PRKCH-209ENST00000553889 STARD3NLO95772 234 aa11.06□□□□□ -0.64
PRKCH-209ENST00000553889 A1BGP04217 495 aa11.06□□□□□ -0.64
PRKCH-209ENST00000553889 ZSCAN22P10073 491 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-209ENST00000553889 CASTP20810 708 aaKnown RBP11.06□□□□□ -0.64
PRKCH-209ENST00000553889 FAM227BQ96M60 508 aa11.06□□□□□ -0.64
PRKCH-209ENST00000553889 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
PRKCH-209ENST00000553889 BOLA2Q9H3K6 86 aa11.06□□□□□ -0.64
PRKCH-209ENST00000553889 TMOD3Q9NYL9 352 aa11.06□□□□□ -0.64
PRKCH-209ENST00000553889 U3KPZ7 1027 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-209ENST00000553889 ZNF609O15014 1411 aa11.06□□□□□ -0.64
PRKCH-209ENST00000553889 ATP5J2-PTCD1G3V325 749 aa11.05□□□□□ -0.64
PRKCH-209ENST00000553889 PTCD1O75127 700 aaKnown RBP11.05□□□□□ -0.64
PRKCH-209ENST00000553889 EVA1CP58658 441 aa11.05□□□□□ -0.64
PRKCH-209ENST00000553889 HSP90AB3PQ58FF7 597 aa11.05□□□□□ -0.64
PRKCH-209ENST00000553889 PRPF40BQ6NWY9 871 aaKnown RBP11.05□□□□□ -0.64
PRKCH-209ENST00000553889 GIGYF2Q6Y7W6 1299 aaKnown RBP11.05□□□□□ -0.64
PRKCH-209ENST00000553889 FBXL16Q8N461 479 aa11.05□□□□□ -0.64
PRKCH-209ENST00000553889 GPT2Q8TD30 523 aa11.05□□□□□ -0.64
PRKCH-209ENST00000553889 ZNF512BQ96KM6 892 aaPredicted RBP11.05□□□□□ -0.64
PRKCH-209ENST00000553889 JAKMIP1Q96N16 626 aaKnown RBP11.05□□□□□ -0.64
PRKCH-209ENST00000553889 DSCC1Q9BVC3 393 aa11.05□□□□□ -0.64
PRKCH-209ENST00000553889 SIL1Q9H173 461 aa11.05□□□□□ -0.64
PRKCH-209ENST00000553889 ERVV-1B6SEH8 477 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 STX6O43752 255 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 PRPF40AO75400 957 aaKnown RBP11.04□□□□□ -0.64
PRKCH-209ENST00000553889 PDCP20941 246 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 RPS6KB1P23443 525 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
PRKCH-209ENST00000553889 ADCK5Q3MIX3 580 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 ZSCAN23Q3MJ62 389 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 MCMDC2Q4G0Z9 681 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 HS1BP3Q53T59 392 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 ZMYM1Q5SVZ6 1142 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 ZBTB38Q8NAP3 1195 aaPredicted RBP11.04□□□□□ -0.64
PRKCH-209ENST00000553889 KLHDC4Q8TBB5 520 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 PIGBQ92521 554 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 AK7Q96M32 723 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 DBNDD2Q9BQY9 259 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 SMC3Q9UQE7 1217 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 AKAP2Q9Y2D5 859 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 MAP3K15Q6ZN16 1313 aa11.04□□□□□ -0.64
PRKCH-209ENST00000553889 ITGB4P16144 1822 aa11.03□□□□□ -0.64
PRKCH-209ENST00000553889 HMGB1P09429 215 aaKnown RBP11.03□□□□□ -0.64
PRKCH-209ENST00000553889 SYT1P21579 422 aa11.03□□□□□ -0.64
PRKCH-209ENST00000553889 BLOC1S2Q6QNY1 142 aa11.03□□□□□ -0.64
PRKCH-209ENST00000553889 LRSAM1Q6UWE0 723 aa11.03□□□□□ -0.64
PRKCH-209ENST00000553889 SYAP1Q96A49 352 aaPredicted RBP11.03□□□□□ -0.64
PRKCH-209ENST00000553889 CHMP4CQ96CF2 233 aa11.03□□□□□ -0.64
PRKCH-209ENST00000553889 AGXT2Q9BYV1 514 aa11.03□□□□□ -0.64
PRKCH-209ENST00000553889 THRAP3Q9Y2W1 955 aaKnown RBP11.03□□□□□ -0.64
PRKCH-209ENST00000553889 WNK3Q9BYP7 1800 aa11.02□□□□□ -0.64
PRKCH-209ENST00000553889 RGL2O15211 777 aa11.02□□□□□ -0.65
PRKCH-209ENST00000553889 LETM1O95202 739 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-209ENST00000553889 F13A1P00488 732 aa11.02□□□□□ -0.65
PRKCH-209ENST00000553889 ZFYP08048 801 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-209ENST00000553889 CYP19A1P11511 503 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-209ENST00000553889 PIP4K2AP48426 406 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-209ENST00000553889 CCDC173Q0VFZ6 552 aa11.02□□□□□ -0.65
PRKCH-209ENST00000553889 CSPP1Q1MSJ5 1256 aa11.02□□□□□ -0.65
PRKCH-209ENST00000553889 ZNF589Q86UQ0 364 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-209ENST00000553889 RGS22Q8NE09 1264 aa11.02□□□□□ -0.65
PRKCH-209ENST00000553889 DDX54Q8TDD1 881 aaKnown RBP11.02□□□□□ -0.65
PRKCH-209ENST00000553889 PDLIM2Q96JY6 352 aa11.02□□□□□ -0.65
PRKCH-209ENST00000553889 CEP126Q9P2H0 1117 aa11.02□□□□□ -0.65
PRKCH-209ENST00000553889 COL16A1Q07092 1604 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-209ENST00000553889 IL6STP40189 918 aaPredicted RBP11.01□□□□□ -0.65
PRKCH-209ENST00000553889 KCNJ4P48050 445 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 ST3GAL1Q11201 340 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 TOB2Q14106 344 aaPredicted RBP11.01□□□□□ -0.65
PRKCH-209ENST00000553889 ME3Q16798 604 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 CAVIN1Q6NZI2 390 aaKnown RBP11.01□□□□□ -0.65
PRKCH-209ENST00000553889 KIF6Q6ZMV9 814 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 DNAJC10Q8IXB1 793 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 LLPHQ9BRT6 129 aaKnown RBP11.01□□□□□ -0.65
PRKCH-209ENST00000553889 PANK2Q9BZ23 570 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 PAG1Q9NWQ8 432 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 BTG4Q9NY30 223 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 TMEM63CQ9P1W3 806 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 MTMR6Q9Y217 621 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 RREB1Q92766 1687 aa11.01□□□□□ -0.65
PRKCH-209ENST00000553889 ANKRD36CQ5JPF3 1778 aa11□□□□□ -0.65
PRKCH-209ENST00000553889 PHF14O94880 888 aa11□□□□□ -0.65
PRKCH-209ENST00000553889 LARGE1O95461 756 aa11□□□□□ -0.65
PRKCH-209ENST00000553889 NASPP49321 788 aaPredicted RBP11□□□□□ -0.65
PRKCH-209ENST00000553889 EVCP57679 992 aa11□□□□□ -0.65
PRKCH-209ENST00000553889 ZBTB3Q9H5J0 574 aa11□□□□□ -0.65
PRKCH-209ENST00000553889 STRN4Q9NRL3 753 aa11□□□□□ -0.65
PRKCH-209ENST00000553889 ASAP1Q9ULH1 1129 aa11□□□□□ -0.65
PRKCH-209ENST00000553889 TPCN1Q9ULQ1 816 aa11□□□□□ -0.65
PRKCH-209ENST00000553889 ELP1O95163 1332 aa11□□□□□ -0.65
PRKCH-209ENST00000553889 LRP5O75197 1615 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 ZNF831Q5JPB2 1677 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 A0A1B0GUL7 405 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 EXOC5O00471 708 aa10.99□□□□□ -0.65
PRKCH-209ENST00000553889 RNF113AO15541 343 aaKnown RBP10.99□□□□□ -0.65
PRKCH-209ENST00000553889 NCLP19338 710 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms