RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
PRKCH-206ENST00000553830 PA2G4Q9UQ80 394 aaKnown RBP17.57■□□□□ 0.4
PRKCH-206ENST00000553830 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
PRKCH-206ENST00000553830 RABL6Q3YEC7 729 aaPredicted RBP17.56■□□□□ 0.4
PRKCH-206ENST00000553830 KLHDC4Q8TBB5 520 aa17.56■□□□□ 0.4
PRKCH-206ENST00000553830 GREM2Q9H772 168 aa17.56■□□□□ 0.4
PRKCH-206ENST00000553830 CACNA1SQ13698 1873 aa17.55■□□□□ 0.4
PRKCH-206ENST00000553830 OS9Q13438 667 aaPredicted RBP17.55■□□□□ 0.4
PRKCH-206ENST00000553830 POLA2Q14181 598 aa17.55■□□□□ 0.4
PRKCH-206ENST00000553830 TAF7LQ5H9L4 462 aa17.55■□□□□ 0.4
PRKCH-206ENST00000553830 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
PRKCH-206ENST00000553830 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
PRKCH-206ENST00000553830 SLC16A10Q8TF71 515 aa17.55■□□□□ 0.4
PRKCH-206ENST00000553830 ZNF594Q96JF6 807 aaPredicted RBP17.55■□□□□ 0.4
PRKCH-206ENST00000553830 SIL1Q9H173 461 aa17.55■□□□□ 0.4
PRKCH-206ENST00000553830 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
PRKCH-206ENST00000553830 SURF6O75683 361 aaKnown RBP17.54■□□□□ 0.4
PRKCH-206ENST00000553830 MTX1Q13505 466 aa17.54■□□□□ 0.4
PRKCH-206ENST00000553830 CCDC57Q2TAC2 916 aa17.54■□□□□ 0.4
PRKCH-206ENST00000553830 CCDC152Q4G0S7 254 aa17.54■□□□□ 0.4
PRKCH-206ENST00000553830 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
PRKCH-206ENST00000553830 NLRP3Q96P20 1036 aa17.54■□□□□ 0.4
PRKCH-206ENST00000553830 KDM2BQ8NHM5 1336 aa17.53■□□□□ 0.4
PRKCH-206ENST00000553830 ITGA6P23229 1130 aa17.53■□□□□ 0.4
PRKCH-206ENST00000553830 IFIT5Q13325 482 aaKnown RBP17.53■□□□□ 0.4
PRKCH-206ENST00000553830 SLC10A5Q5PT55 438 aa17.53■□□□□ 0.4
PRKCH-206ENST00000553830 MTFR1LQ9H019 292 aa17.53■□□□□ 0.4
PRKCH-206ENST00000553830 SEC31BQ9NQW1 1179 aa17.53■□□□□ 0.4
PRKCH-206ENST00000553830 ANKRD18BA2A2Z9 1011 aa17.52■□□□□ 0.4
PRKCH-206ENST00000553830 CSF1RP07333 972 aa17.52■□□□□ 0.4
PRKCH-206ENST00000553830 RFX5P48382 616 aaPredicted RBP17.52■□□□□ 0.4
PRKCH-206ENST00000553830 COL11A2P13942 1736 aaPredicted RBP17.52■□□□□ 0.39
PRKCH-206ENST00000553830 COL4A1P02462 1669 aa17.52■□□□□ 0.39
PRKCH-206ENST00000553830 POLD1P28340 1107 aa17.51■□□□□ 0.39
PRKCH-206ENST00000553830 SMARCA5O60264 1052 aaPredicted RBP17.5■□□□□ 0.39
PRKCH-206ENST00000553830 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
PRKCH-206ENST00000553830 ANKRD45Q5TZF3 282 aa17.5■□□□□ 0.39
PRKCH-206ENST00000553830 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
PRKCH-206ENST00000553830 KLHL34Q8N239 644 aa17.5■□□□□ 0.39
PRKCH-206ENST00000553830 RPGRQ92834 1020 aaKnown RBP17.5■□□□□ 0.39
PRKCH-206ENST00000553830 DCTPP1Q9H773 170 aa17.5■□□□□ 0.39
PRKCH-206ENST00000553830 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
PRKCH-206ENST00000553830 SF3B3Q15393 1217 aaKnown RBP17.49■□□□□ 0.39
PRKCH-206ENST00000553830 GCC1Q96CN9 775 aa17.49■□□□□ 0.39
PRKCH-206ENST00000553830 PUS3Q9BZE2 481 aaKnown RBP17.49■□□□□ 0.39
PRKCH-206ENST00000553830 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
PRKCH-206ENST00000553830 PDZRN3Q9UPQ7 1066 aa17.49■□□□□ 0.39
PRKCH-206ENST00000553830 RIC1Q4ADV7 1423 aa17.48■□□□□ 0.39
PRKCH-206ENST00000553830 LRRC24Q50LG9 513 aa17.48■□□□□ 0.39
PRKCH-206ENST00000553830 DDX46Q7L014 1031 aaKnown RBP17.48■□□□□ 0.39
PRKCH-206ENST00000553830 SMC5Q8IY18 1101 aa17.48■□□□□ 0.39
PRKCH-206ENST00000553830 CDC5LQ99459 802 aaKnown RBP17.47■□□□□ 0.39
PRKCH-206ENST00000553830 BRIP1Q9BX63 1249 aa17.47■□□□□ 0.39
PRKCH-206ENST00000553830 COPRSQ9NQ92 184 aa17.47■□□□□ 0.39
PRKCH-206ENST00000553830 CNNM1Q9NRU3 951 aa17.47■□□□□ 0.39
PRKCH-206ENST00000553830 PPP1R1BQ9UD71 204 aaPredicted RBP17.47■□□□□ 0.39
PRKCH-206ENST00000553830 RTL9Q8NET4 1388 aa17.46■□□□□ 0.39
PRKCH-206ENST00000553830 PDE6BP35913 854 aa17.46■□□□□ 0.39
PRKCH-206ENST00000553830 IGHMBP2P38935 993 aaKnown RBP17.46■□□□□ 0.39
PRKCH-206ENST00000553830 HSP90AB4PQ58FF6 505 aa17.46■□□□□ 0.39
PRKCH-206ENST00000553830 C2CD5Q86YS7 1000 aa17.46■□□□□ 0.39
PRKCH-206ENST00000553830 ANKRD18AQ8IVF6 992 aa17.46■□□□□ 0.39
PRKCH-206ENST00000553830 CELF1Q92879 486 aaKnown RBP17.46■□□□□ 0.39
PRKCH-206ENST00000553830 RBM17Q96I25 401 aaKnown RBP17.46■□□□□ 0.39
PRKCH-206ENST00000553830 MPHOSPH8Q99549 860 aa17.46■□□□□ 0.39
PRKCH-206ENST00000553830 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
PRKCH-206ENST00000553830 IL1RAPL2Q9NP60 686 aa17.46■□□□□ 0.39
PRKCH-206ENST00000553830 LRP5O75197 1615 aa17.46■□□□□ 0.39
PRKCH-206ENST00000553830 A0A1B0GUL6 1792 aa17.45■□□□□ 0.38
PRKCH-206ENST00000553830 KIF13BQ9NQT8 1826 aa17.45■□□□□ 0.38
PRKCH-206ENST00000553830 EYA2O00167 538 aa17.45■□□□□ 0.38
PRKCH-206ENST00000553830 CHRNA5P30532 468 aa17.45■□□□□ 0.38
PRKCH-206ENST00000553830 LDHAL6AQ6ZMR3 332 aa17.45■□□□□ 0.38
PRKCH-206ENST00000553830 ZNF622Q969S3 477 aaKnown RBP eCLIP17.45■□□□□ 0.38
PRKCH-206ENST00000553830 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
PRKCH-206ENST00000553830 NOP58Q9Y2X3 529 aaKnown RBP17.45■□□□□ 0.38
PRKCH-206ENST00000553830 C10orf71Q711Q0 1435 aa17.45■□□□□ 0.38
PRKCH-206ENST00000553830 RAB11FIP3O75154 756 aa17.44■□□□□ 0.38
PRKCH-206ENST00000553830 RHPN1Q8TCX5 695 aa17.44■□□□□ 0.38
PRKCH-206ENST00000553830 SOCS7O14512 581 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 RGS3P49796 1198 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 NUCB1Q02818 461 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 TFCP2Q12800 502 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 CRY2Q49AN0 593 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 METTL24Q5JXM2 366 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 ATG9AQ7Z3C6 839 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 ERC1Q8IUD2 1116 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 DLEC1Q9Y238 1755 aa17.43■□□□□ 0.38
PRKCH-206ENST00000553830 H0YIN7 160 aa17.42■□□□□ 0.38
PRKCH-206ENST00000553830 SASH1O94885 1247 aa17.42■□□□□ 0.38
PRKCH-206ENST00000553830 NPR1P16066 1061 aa17.42■□□□□ 0.38
PRKCH-206ENST00000553830 IL15P40933 162 aaPredicted RBP17.42■□□□□ 0.38
PRKCH-206ENST00000553830 PTGER2P43116 358 aa17.42■□□□□ 0.38
PRKCH-206ENST00000553830 RPS8P62241 208 aaKnown RBP17.42■□□□□ 0.38
PRKCH-206ENST00000553830 GRAPQ13588 217 aa17.42■□□□□ 0.38
PRKCH-206ENST00000553830 SLC51AQ86UW1 340 aa17.42■□□□□ 0.38
PRKCH-206ENST00000553830 HELBQ8NG08 1087 aaPredicted RBP17.42■□□□□ 0.38
PRKCH-206ENST00000553830 GRAPLQ8TC17 118 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms