RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 SETDB2Q96T68 719 aa10.63□□□□□ -0.71
RDH11-205ENST00000553816 NIP7Q9Y221 180 aaKnown RBP eCLIP10.63□□□□□ -0.71
RDH11-205ENST00000553816 CCDC88AQ3V6T2 1871 aa10.63□□□□□ -0.71
RDH11-205ENST00000553816 CACNA1FO60840 1977 aa10.63□□□□□ -0.71
RDH11-205ENST00000553816 UBN2Q6ZU65 1347 aa10.62□□□□□ -0.71
RDH11-205ENST00000553816 ATP10DQ9P241 1426 aa10.62□□□□□ -0.71
RDH11-205ENST00000553816 GPTP24298 496 aa10.62□□□□□ -0.71
RDH11-205ENST00000553816 KIF6Q6ZMV9 814 aa10.62□□□□□ -0.71
RDH11-205ENST00000553816 PHAXQ9H814 394 aaKnown RBP10.62□□□□□ -0.71
RDH11-205ENST00000553816 ZNF652Q9Y2D9 606 aa10.62□□□□□ -0.71
RDH11-205ENST00000553816 SLX4Q8IY92 1834 aa10.61□□□□□ -0.71
RDH11-205ENST00000553816 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
RDH11-205ENST00000553816 POTEEQ6S8J3 1075 aa10.61□□□□□ -0.71
RDH11-205ENST00000553816 GIGYF2Q6Y7W6 1299 aaKnown RBP10.61□□□□□ -0.71
RDH11-205ENST00000553816 ZNF34Q8IZ26 560 aa10.61□□□□□ -0.71
RDH11-205ENST00000553816 ZNF428Q96B54 188 aa10.61□□□□□ -0.71
RDH11-205ENST00000553816 DBF4Q9UBU7 674 aaPredicted RBP10.61□□□□□ -0.71
RDH11-205ENST00000553816 SBF1O95248 1867 aa10.61□□□□□ -0.71
RDH11-205ENST00000553816 DDX60Q8IY21 1712 aaKnown RBP10.61□□□□□ -0.71
RDH11-205ENST00000553816 TAF1P21675 1872 aa10.6□□□□□ -0.71
RDH11-205ENST00000553816 RGL2O15211 777 aa10.6□□□□□ -0.71
RDH11-205ENST00000553816 TWISTNBQ3B726 338 aaPredicted RBP10.6□□□□□ -0.71
RDH11-205ENST00000553816 SUSD4Q5VX71 490 aa10.6□□□□□ -0.71
RDH11-205ENST00000553816 NUTM1Q86Y26 1132 aa10.6□□□□□ -0.71
RDH11-205ENST00000553816 CNBD1Q8NA66 436 aa10.6□□□□□ -0.71
RDH11-205ENST00000553816 BCS1LQ9Y276 419 aa10.6□□□□□ -0.71
RDH11-205ENST00000553816 ABCC12Q96J65 1359 aa10.6□□□□□ -0.71
RDH11-205ENST00000553816 VAMP4O75379 141 aa10.59□□□□□ -0.71
RDH11-205ENST00000553816 G2E3Q7L622 706 aa10.59□□□□□ -0.71
RDH11-205ENST00000553816 NBPF5PQ86XG9 351 aaPredicted RBP10.59□□□□□ -0.71
RDH11-205ENST00000553816 C2CD5Q86YS7 1000 aa10.59□□□□□ -0.71
RDH11-205ENST00000553816 CDCA7LQ96GN5 454 aa10.59□□□□□ -0.71
RDH11-205ENST00000553816 FER1L6Q2WGJ9 1857 aa10.58□□□□□ -0.72
RDH11-205ENST00000553816 NTSR2O95665 410 aa10.58□□□□□ -0.72
RDH11-205ENST00000553816 NUDT7P0C024 238 aa10.58□□□□□ -0.72
RDH11-205ENST00000553816 ERFEQ4G0M1 354 aa10.58□□□□□ -0.72
RDH11-205ENST00000553816 CCDC30Q5VVM6 783 aa10.58□□□□□ -0.72
RDH11-205ENST00000553816 SYNE4Q8N205 404 aa10.58□□□□□ -0.72
RDH11-205ENST00000553816 BRIP1Q9BX63 1249 aa10.58□□□□□ -0.72
RDH11-205ENST00000553816 HYPKQ9NX55 129 aa10.58□□□□□ -0.72
RDH11-205ENST00000553816 PIM2Q9P1W9 311 aa10.58□□□□□ -0.72
RDH11-205ENST00000553816 H0YIN7 160 aa10.57□□□□□ -0.72
RDH11-205ENST00000553816 NPHP1O15259 732 aa10.57□□□□□ -0.72
RDH11-205ENST00000553816 ST5P78524 1137 aa10.57□□□□□ -0.72
RDH11-205ENST00000553816 TCIRG1Q13488 830 aa10.57□□□□□ -0.72
RDH11-205ENST00000553816 TPTE2Q6XPS3 522 aa10.57□□□□□ -0.72
RDH11-205ENST00000553816 NLRP10Q86W26 655 aa10.57□□□□□ -0.72
RDH11-205ENST00000553816 PLBD2Q8NHP8 589 aa10.57□□□□□ -0.72
RDH11-205ENST00000553816 IBTKQ9P2D0 1353 aaPredicted RBP10.56□□□□□ -0.72
RDH11-205ENST00000553816 KLRG2A4D1S0 409 aaPredicted RBP10.56□□□□□ -0.72
RDH11-205ENST00000553816 ATP5J2-PTCD1G3V325 749 aa10.56□□□□□ -0.72
RDH11-205ENST00000553816 GRIN3BO60391 1043 aa10.56□□□□□ -0.72
RDH11-205ENST00000553816 YY1P25490 414 aa10.56□□□□□ -0.72
RDH11-205ENST00000553816 PDE6BP35913 854 aa10.56□□□□□ -0.72
RDH11-205ENST00000553816 SLFN5Q08AF3 891 aa10.56□□□□□ -0.72
RDH11-205ENST00000553816 DALRD3Q5D0E6 543 aaKnown RBP10.56□□□□□ -0.72
RDH11-205ENST00000553816 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
RDH11-205ENST00000553816 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.72
RDH11-205ENST00000553816 ISCA1Q9BUE6 129 aa10.56□□□□□ -0.72
RDH11-205ENST00000553816 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
RDH11-205ENST00000553816 COL4A1P02462 1669 aa10.55□□□□□ -0.72
RDH11-205ENST00000553816 SRGNP10124 158 aa10.55□□□□□ -0.72
RDH11-205ENST00000553816 RIC3Q7Z5B4 369 aa10.55□□□□□ -0.72
RDH11-205ENST00000553816 TTLL6Q8N841 843 aa10.55□□□□□ -0.72
RDH11-205ENST00000553816 NYXQ9GZU5 481 aa10.55□□□□□ -0.72
RDH11-205ENST00000553816 MYH16Q9H6N6 1097 aa10.55□□□□□ -0.72
RDH11-205ENST00000553816 DICER1Q9UPY3 1922 aaKnown RBP10.54□□□□□ -0.72
RDH11-205ENST00000553816 ADCY9O60503 1353 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 KIF3CO14782 793 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
RDH11-205ENST00000553816 PRELPP51888 382 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 RIC1Q4ADV7 1423 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 PARP10Q53GL7 1025 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 HSP90AB3PQ58FF7 597 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 ARHGAP27Q6ZUM4 889 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 PPP1R42Q7Z4L9 355 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 SLC51AQ86UW1 340 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 TRMT2AQ8IZ69 625 aaKnown RBP10.54□□□□□ -0.72
RDH11-205ENST00000553816 MYD88Q99836 296 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 UTP14AQ9BVJ6 771 aaKnown RBP10.54□□□□□ -0.72
RDH11-205ENST00000553816 LHX6Q9UPM6 363 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 MAP3K2Q9Y2U5 619 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 MYH3P11055 1940 aa10.54□□□□□ -0.72
RDH11-205ENST00000553816 PI4KAP2A4QPH2 592 aa10.53□□□□□ -0.72
RDH11-205ENST00000553816 C2orf72A6NCS6 295 aa10.53□□□□□ -0.72
RDH11-205ENST00000553816 E9PSI1 815 aa10.53□□□□□ -0.72
RDH11-205ENST00000553816 HCLS1P14317 486 aaPredicted RBP10.53□□□□□ -0.72
RDH11-205ENST00000553816 OLFM4Q6UX06 510 aa10.53□□□□□ -0.72
RDH11-205ENST00000553816 PI4KAP1Q8N8J0 262 aa10.53□□□□□ -0.72
RDH11-205ENST00000553816 JARID2Q92833 1246 aaPredicted RBP10.53□□□□□ -0.72
RDH11-205ENST00000553816 MASTLQ96GX5 879 aa10.53□□□□□ -0.72
RDH11-205ENST00000553816 METTL22Q9BUU2 404 aaPredicted RBP10.53□□□□□ -0.72
RDH11-205ENST00000553816 STK31Q9BXU1 1019 aa10.53□□□□□ -0.72
RDH11-205ENST00000553816 TRMT112Q9UI30 125 aaKnown RBP10.53□□□□□ -0.72
RDH11-205ENST00000553816 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
RDH11-205ENST00000553816 C21orf2O43822 256 aa10.52□□□□□ -0.73
RDH11-205ENST00000553816 IGKV5-2P06315 115 aa10.52□□□□□ -0.73
RDH11-205ENST00000553816 RASSF7Q02833 373 aa10.52□□□□□ -0.73
RDH11-205ENST00000553816 FLIIQ13045 1269 aa10.52□□□□□ -0.73
RDH11-205ENST00000553816 CRY2Q49AN0 593 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms