RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
HNRNPC-208ENST00000553753 IARSP41252 1262 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-208ENST00000553753 SLC51AQ86UW1 340 aa13.03□□□□□ -0.32
HNRNPC-208ENST00000553753 SP8Q8IXZ3 490 aa13.03□□□□□ -0.32
HNRNPC-208ENST00000553753 JARID2Q92833 1246 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-208ENST00000553753 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
HNRNPC-208ENST00000553753 RRAGCQ9HB90 399 aa13.03□□□□□ -0.32
HNRNPC-208ENST00000553753 TIAM2Q8IVF5 1701 aa13.03□□□□□ -0.32
HNRNPC-208ENST00000553753 PDE8AO60658 829 aa13.02□□□□□ -0.32
HNRNPC-208ENST00000553753 TMC4Q7Z404 712 aa13.02□□□□□ -0.32
HNRNPC-208ENST00000553753 TOMM70O94826 608 aa13.02□□□□□ -0.33
HNRNPC-208ENST00000553753 LINS1Q8NG48 757 aa13.02□□□□□ -0.33
HNRNPC-208ENST00000553753 CELF1Q92879 486 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-208ENST00000553753 CDHR2Q9BYE9 1310 aa13.02□□□□□ -0.33
HNRNPC-208ENST00000553753 TAF1P21675 1872 aa13.01□□□□□ -0.33
HNRNPC-208ENST00000553753 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-208ENST00000553753 GCKRQ14397 625 aa13.01□□□□□ -0.33
HNRNPC-208ENST00000553753 CCDC152Q4G0S7 254 aa13.01□□□□□ -0.33
HNRNPC-208ENST00000553753 C16orf71Q8IYS4 520 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-208ENST00000553753 TRMT2AQ8IZ69 625 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-208ENST00000553753 JDP2Q8WYK2 163 aa13.01□□□□□ -0.33
HNRNPC-208ENST00000553753 F6X3S4 739 aa13□□□□□ -0.33
HNRNPC-208ENST00000553753 H7C1W4 665 aa13□□□□□ -0.33
HNRNPC-208ENST00000553753 RPS8P62241 208 aaKnown RBP13□□□□□ -0.33
HNRNPC-208ENST00000553753 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
HNRNPC-208ENST00000553753 MPNDQ8N594 471 aa13□□□□□ -0.33
HNRNPC-208ENST00000553753 FZD9O00144 591 aa12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 DDNO94850 711 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 UBE3BQ7Z3V4 1068 aa12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 LARGE2Q8N3Y3 721 aa12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 SUPT20HQ8NEM7 779 aa12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 VPS33BQ9H267 617 aa12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 SEC31BQ9NQW1 1179 aa12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 CTSWP56202 376 aa12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 CCDC85AQ96PX6 553 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-208ENST00000553753 POTECB2RU33 542 aa12.98□□□□□ -0.33
HNRNPC-208ENST00000553753 PPIP5K2O43314 1243 aa12.98□□□□□ -0.33
HNRNPC-208ENST00000553753 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
HNRNPC-208ENST00000553753 TTLL11Q8NHH1 800 aa12.98□□□□□ -0.33
HNRNPC-208ENST00000553753 NSFL1CQ9UNZ2 370 aaKnown RBP12.98□□□□□ -0.33
HNRNPC-208ENST00000553753 AOC3Q16853 763 aa12.97□□□□□ -0.33
HNRNPC-208ENST00000553753 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-208ENST00000553753 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
HNRNPC-208ENST00000553753 ZNF541Q9H0D2 1346 aa12.97□□□□□ -0.33
HNRNPC-208ENST00000553753 CASP7P55210 303 aa12.97□□□□□ -0.33
HNRNPC-208ENST00000553753 ALDH1L2Q3SY69 923 aa12.97□□□□□ -0.33
HNRNPC-208ENST00000553753 SLC4A10Q6U841 1118 aa12.97□□□□□ -0.33
HNRNPC-208ENST00000553753 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
HNRNPC-208ENST00000553753 WDR90Q96KV7 1748 aa12.97□□□□□ -0.33
HNRNPC-208ENST00000553753 COL4A1P02462 1669 aa12.96□□□□□ -0.33
HNRNPC-208ENST00000553753 COL4A5P29400 1685 aa12.96□□□□□ -0.33
HNRNPC-208ENST00000553753 CT47B1P0C2W7 299 aaPredicted RBP12.96□□□□□ -0.34
HNRNPC-208ENST00000553753 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.34
HNRNPC-208ENST00000553753 KIAA2012Q0VF49 1180 aa12.96□□□□□ -0.34
HNRNPC-208ENST00000553753 ANKRD18AQ8IVF6 992 aa12.96□□□□□ -0.34
HNRNPC-208ENST00000553753 NIM1KQ8IY84 436 aa12.96□□□□□ -0.34
HNRNPC-208ENST00000553753 GPC2Q8N158 579 aa12.96□□□□□ -0.34
HNRNPC-208ENST00000553753 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.34
HNRNPC-208ENST00000553753 CDC5LQ99459 802 aaKnown RBP12.96□□□□□ -0.34
HNRNPC-208ENST00000553753 BCL2L13Q9BXK5 485 aa12.96□□□□□ -0.34
HNRNPC-208ENST00000553753 GREM2Q9H772 168 aa12.96□□□□□ -0.34
HNRNPC-208ENST00000553753 LRRC37AA6NMS7 1700 aa12.95□□□□□ -0.34
HNRNPC-208ENST00000553753 PTPRCP08575 1304 aa12.95□□□□□ -0.34
HNRNPC-208ENST00000553753 IQCA1LA6NCM1 817 aa12.95□□□□□ -0.34
HNRNPC-208ENST00000553753 GPSM2P81274 684 aa12.95□□□□□ -0.34
HNRNPC-208ENST00000553753 SRCIN1Q9C0H9 1055 aa12.95□□□□□ -0.34
HNRNPC-208ENST00000553753 MYH3P11055 1940 aa12.95□□□□□ -0.34
HNRNPC-208ENST00000553753 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 HSPA6P17066 643 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 HNRNPUQ00839 825 aaKnown RBP eCLIP12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 FSTL1Q12841 308 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 WASHC4Q2M389 1173 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 POLLQ9UGP5 575 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 ZNRF3Q9ULT6 936 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 C6orf229H3BNL8 230 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 GRM8O00222 908 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 CSF1RP07333 972 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 SMC1BQ8NDV3 1235 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 PODXL2Q9NZ53 605 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
HNRNPC-208ENST00000553753 TBC1D16Q8TBP0 767 aa12.93□□□□□ -0.34
HNRNPC-208ENST00000553753 BSDC1Q9NW68 430 aaPredicted RBP12.93□□□□□ -0.34
HNRNPC-208ENST00000553753 GJA3Q9Y6H8 435 aa12.93□□□□□ -0.34
HNRNPC-208ENST00000553753 DUOX1Q9NRD9 1551 aa12.93□□□□□ -0.34
HNRNPC-208ENST00000553753 ITGA6P23229 1130 aa12.92□□□□□ -0.34
HNRNPC-208ENST00000553753 EYA3Q99504 573 aa12.92□□□□□ -0.34
HNRNPC-208ENST00000553753 HACL1Q9UJ83 578 aa12.92□□□□□ -0.34
HNRNPC-208ENST00000553753 SCN4AP35499 1836 aa12.92□□□□□ -0.34
HNRNPC-208ENST00000553753 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
HNRNPC-208ENST00000553753 IGHMBP2P38935 993 aaKnown RBP12.92□□□□□ -0.34
HNRNPC-208ENST00000553753 FOXO4P98177 505 aa12.92□□□□□ -0.34
HNRNPC-208ENST00000553753 CXCL9Q07325 125 aa12.92□□□□□ -0.34
HNRNPC-208ENST00000553753 FAM161AQ3B820 660 aa12.92□□□□□ -0.34
HNRNPC-208ENST00000553753 TAF1DQ9H5J8 278 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-208ENST00000553753 GGA1Q9UJY5 639 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms