RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 GRAPLQ8TC17 118 aaPredicted RBP17.99■□□□□ 0.47
SV2B-204ENST00000553727 PLA2G12BQ9BX93 195 aa17.99■□□□□ 0.47
SV2B-204ENST00000553727 DLEC1Q9Y238 1755 aa17.99■□□□□ 0.47
SV2B-204ENST00000553727 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
SV2B-204ENST00000553727 BBOX1O75936 387 aa17.98■□□□□ 0.47
SV2B-204ENST00000553727 FTSJ3Q8IY81 847 aaKnown RBP17.98■□□□□ 0.47
SV2B-204ENST00000553727 C7orf43Q8WVR3 580 aa17.98■□□□□ 0.47
SV2B-204ENST00000553727 USP44Q9H0E7 712 aa17.98■□□□□ 0.47
SV2B-204ENST00000553727 TMX4Q9H1E5 349 aaPredicted RBP17.98■□□□□ 0.47
SV2B-204ENST00000553727 SEC31BQ9NQW1 1179 aa17.98■□□□□ 0.47
SV2B-204ENST00000553727 BRCA1P38398 1863 aaKnown RBP17.98■□□□□ 0.47
SV2B-204ENST00000553727 SOGA3Q5TF21 947 aa17.97■□□□□ 0.47
SV2B-204ENST00000553727 INTS3Q68E01 1043 aaKnown RBP17.97■□□□□ 0.47
SV2B-204ENST00000553727 CELF1Q92879 486 aaKnown RBP17.97■□□□□ 0.47
SV2B-204ENST00000553727 SUCLG2Q96I99 432 aa17.97■□□□□ 0.47
SV2B-204ENST00000553727 GREM2Q9H772 168 aa17.97■□□□□ 0.47
SV2B-204ENST00000553727 CHMP3Q9Y3E7 222 aa17.97■□□□□ 0.47
SV2B-204ENST00000553727 RPS8P62241 208 aaKnown RBP17.96■□□□□ 0.47
SV2B-204ENST00000553727 FOXO4P98177 505 aa17.96■□□□□ 0.47
SV2B-204ENST00000553727 CCDC93Q567U6 631 aa17.96■□□□□ 0.47
SV2B-204ENST00000553727 EPHA10Q5JZY3 1008 aa17.96■□□□□ 0.47
SV2B-204ENST00000553727 DZIP1LQ8IYY4 767 aaKnown RBP17.96■□□□□ 0.47
SV2B-204ENST00000553727 TMEM57Q8N5G2 664 aa17.96■□□□□ 0.47
SV2B-204ENST00000553727 UTYO14607 1347 aa17.96■□□□□ 0.46
SV2B-204ENST00000553727 SLX4Q8IY92 1834 aa17.95■□□□□ 0.46
SV2B-204ENST00000553727 PLIN1O60240 522 aa17.95■□□□□ 0.46
SV2B-204ENST00000553727 CSF1RP07333 972 aa17.95■□□□□ 0.46
SV2B-204ENST00000553727 UBTFL1P0CB47 393 aaPredicted RBP17.95■□□□□ 0.46
SV2B-204ENST00000553727 RASSF7Q02833 373 aa17.95■□□□□ 0.46
SV2B-204ENST00000553727 LMBR1LQ6UX01 489 aa17.95■□□□□ 0.46
SV2B-204ENST00000553727 SLC51AQ86UW1 340 aa17.95■□□□□ 0.46
SV2B-204ENST00000553727 ATP6V0A2Q9Y487 856 aa17.95■□□□□ 0.46
SV2B-204ENST00000553727 LAMB2P55268 1798 aa17.94■□□□□ 0.46
SV2B-204ENST00000553727 ITGA6P23229 1130 aa17.94■□□□□ 0.46
SV2B-204ENST00000553727 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
SV2B-204ENST00000553727 ANKRD18AQ8IVF6 992 aa17.94■□□□□ 0.46
SV2B-204ENST00000553727 SP8Q8IXZ3 490 aa17.94■□□□□ 0.46
SV2B-204ENST00000553727 RTKN2Q8IZC4 609 aa17.94■□□□□ 0.46
SV2B-204ENST00000553727 CDC5LQ99459 802 aaKnown RBP17.94■□□□□ 0.46
SV2B-204ENST00000553727 NFKBIEO00221 500 aa17.93■□□□□ 0.46
SV2B-204ENST00000553727 RLBP1P12271 317 aa17.93■□□□□ 0.46
SV2B-204ENST00000553727 CC2D2BQ6DHV5 1058 aa17.93■□□□□ 0.46
SV2B-204ENST00000553727 TMC4Q7Z404 712 aa17.93■□□□□ 0.46
SV2B-204ENST00000553727 ITPRIPQ8IWB1 547 aa17.93■□□□□ 0.46
SV2B-204ENST00000553727 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
SV2B-204ENST00000553727 KAZALD1Q96I82 304 aa17.93■□□□□ 0.46
SV2B-204ENST00000553727 MEIS3Q99687 375 aa17.93■□□□□ 0.46
SV2B-204ENST00000553727 BICC1Q9H694 974 aaKnown RBP17.93■□□□□ 0.46
SV2B-204ENST00000553727 ANKRD18BA2A2Z9 1011 aa17.92■□□□□ 0.46
SV2B-204ENST00000553727 MS4A1P11836 297 aa17.92■□□□□ 0.46
SV2B-204ENST00000553727 IFIT5Q13325 482 aaKnown RBP17.92■□□□□ 0.46
SV2B-204ENST00000553727 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.92■□□□□ 0.46
SV2B-204ENST00000553727 TAOK3Q9H2K8 898 aa17.92■□□□□ 0.46
SV2B-204ENST00000553727 ARFGEF1Q9Y6D6 1849 aa17.92■□□□□ 0.46
SV2B-204ENST00000553727 CACNA1SQ13698 1873 aa17.92■□□□□ 0.46
SV2B-204ENST00000553727 GNAI3P08754 354 aa17.91■□□□□ 0.46
SV2B-204ENST00000553727 CCDC57Q2TAC2 916 aa17.91■□□□□ 0.46
SV2B-204ENST00000553727 HDAC5Q9UQL6 1122 aa17.91■□□□□ 0.46
SV2B-204ENST00000553727 RTL9Q8NET4 1388 aa17.91■□□□□ 0.46
SV2B-204ENST00000553727 IGHMBP2P38935 993 aaKnown RBP17.9■□□□□ 0.46
SV2B-204ENST00000553727 FKBP4Q02790 459 aaKnown RBP eCLIP17.9■□□□□ 0.46
SV2B-204ENST00000553727 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
SV2B-204ENST00000553727 TAF7LQ5H9L4 462 aa17.9■□□□□ 0.46
SV2B-204ENST00000553727 C9orf131Q5VYM1 1079 aa17.9■□□□□ 0.46
SV2B-204ENST00000553727 MPNDQ8N594 471 aa17.9■□□□□ 0.46
SV2B-204ENST00000553727 MPHOSPH8Q99549 860 aa17.9■□□□□ 0.46
SV2B-204ENST00000553727 RNF181Q9P0P0 153 aa17.9■□□□□ 0.46
SV2B-204ENST00000553727 LMNB1P20700 586 aa17.89■□□□□ 0.45
SV2B-204ENST00000553727 YY1P25490 414 aa17.89■□□□□ 0.45
SV2B-204ENST00000553727 DPP8Q6V1X1 898 aaPredicted RBP17.89■□□□□ 0.45
SV2B-204ENST00000553727 ANKRD44Q8N8A2 993 aa17.89■□□□□ 0.45
SV2B-204ENST00000553727 ZNF277Q9NRM2 450 aaPredicted RBP17.89■□□□□ 0.45
SV2B-204ENST00000553727 NSFL1CQ9UNZ2 370 aaKnown RBP17.89■□□□□ 0.45
SV2B-204ENST00000553727 LRRFIP2Q9Y608 721 aaKnown RBP17.89■□□□□ 0.45
SV2B-204ENST00000553727 COL4A1P02462 1669 aa17.88■□□□□ 0.45
SV2B-204ENST00000553727 PRELPP51888 382 aa17.88■□□□□ 0.45
SV2B-204ENST00000553727 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
SV2B-204ENST00000553727 ZNF594Q96JF6 807 aaPredicted RBP17.88■□□□□ 0.45
SV2B-204ENST00000553727 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
SV2B-204ENST00000553727 LTBP3Q9NS15 1303 aa17.88■□□□□ 0.45
SV2B-204ENST00000553727 TAF1P21675 1872 aa17.88■□□□□ 0.45
SV2B-204ENST00000553727 GPSM2P81274 684 aa17.87■□□□□ 0.45
SV2B-204ENST00000553727 PSMD1Q99460 953 aa17.87■□□□□ 0.45
SV2B-204ENST00000553727 ANKIB1Q9P2G1 1089 aa17.87■□□□□ 0.45
SV2B-204ENST00000553727 GNAI2P04899 355 aa17.86■□□□□ 0.45
SV2B-204ENST00000553727 COG6Q9Y2V7 657 aa17.86■□□□□ 0.45
SV2B-204ENST00000553727 C6orf229H3BNL8 230 aa17.85■□□□□ 0.45
SV2B-204ENST00000553727 ZBTB7BO15156 539 aaPredicted RBP17.85■□□□□ 0.45
SV2B-204ENST00000553727 IARSP41252 1262 aaKnown RBP17.85■□□□□ 0.45
SV2B-204ENST00000553727 C20orf194Q5TEA3 1177 aa17.85■□□□□ 0.45
SV2B-204ENST00000553727 LDHAL6AQ6ZMR3 332 aa17.85■□□□□ 0.45
SV2B-204ENST00000553727 SUPT20HQ8NEM7 779 aa17.85■□□□□ 0.45
SV2B-204ENST00000553727 CNNM1Q9NRU3 951 aa17.85■□□□□ 0.45
SV2B-204ENST00000553727 MINPP1Q9UNW1 487 aa17.85■□□□□ 0.45
SV2B-204ENST00000553727 MYH3P11055 1940 aa17.84■□□□□ 0.45
SV2B-204ENST00000553727 SNED1Q8TER0 1413 aa17.84■□□□□ 0.45
SV2B-204ENST00000553727 PDE3AQ14432 1141 aa17.84■□□□□ 0.45
SV2B-204ENST00000553727 MVPQ14764 893 aaKnown RBP17.84■□□□□ 0.45
SV2B-204ENST00000553727 GOLGB1Q14789 3259 aaKnown RBP17.84■□□□□ 0.45
SV2B-204ENST00000553727 PPIP5K2O43314 1243 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms