RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 H0YIN7 160 aa24.18■■□□□ 1.46
PSEN1-207ENST00000553599 EPHA10Q5JZY3 1008 aa24.18■■□□□ 1.46
PSEN1-207ENST00000553599 LMBR1LQ6UX01 489 aa24.18■■□□□ 1.46
PSEN1-207ENST00000553599 ANKRD44Q8N8A2 993 aa24.18■■□□□ 1.46
PSEN1-207ENST00000553599 HOXA10P31260 410 aaPredicted RBP24.17■■□□□ 1.46
PSEN1-207ENST00000553599 RPAP2Q8IXW5 612 aaPredicted RBP24.17■■□□□ 1.46
PSEN1-207ENST00000553599 EXOC6Q8TAG9 804 aa24.17■■□□□ 1.46
PSEN1-207ENST00000553599 RPGRQ92834 1020 aaKnown RBP24.17■■□□□ 1.46
PSEN1-207ENST00000553599 SRGNP10124 158 aa24.16■■□□□ 1.46
PSEN1-207ENST00000553599 NPR1P16066 1061 aa24.16■■□□□ 1.46
PSEN1-207ENST00000553599 IRX6P78412 446 aaPredicted RBP24.16■■□□□ 1.46
PSEN1-207ENST00000553599 C3orf67Q6ZVT6 689 aa24.16■■□□□ 1.46
PSEN1-207ENST00000553599 C2CD5Q86YS7 1000 aa24.16■■□□□ 1.46
PSEN1-207ENST00000553599 MASTLQ96GX5 879 aa24.16■■□□□ 1.46
PSEN1-207ENST00000553599 RBM17Q96I25 401 aaKnown RBP24.16■■□□□ 1.46
PSEN1-207ENST00000553599 STYK1Q6J9G0 422 aa24.15■■□□□ 1.46
PSEN1-207ENST00000553599 DDX46Q7L014 1031 aaKnown RBP24.15■■□□□ 1.46
PSEN1-207ENST00000553599 CRAMP1Q96RY5 1269 aa24.14■■□□□ 1.45
PSEN1-207ENST00000553599 ALDH1B1P30837 517 aa24.13■■□□□ 1.45
PSEN1-207ENST00000553599 ATP8B2P98198 1209 aa24.13■■□□□ 1.45
PSEN1-207ENST00000553599 IFIT5Q13325 482 aaKnown RBP24.13■■□□□ 1.45
PSEN1-207ENST00000553599 CCDC57Q2TAC2 916 aa24.13■■□□□ 1.45
PSEN1-207ENST00000553599 ERICH6BQ5W0A0 696 aa24.13■■□□□ 1.45
PSEN1-207ENST00000553599 CDC5LQ99459 802 aaKnown RBP24.13■■□□□ 1.45
PSEN1-207ENST00000553599 GREM2Q9H772 168 aa24.13■■□□□ 1.45
PSEN1-207ENST00000553599 C1orf115Q9H7X2 142 aa24.13■■□□□ 1.45
PSEN1-207ENST00000553599 CHMP3Q9Y3E7 222 aa24.13■■□□□ 1.45
PSEN1-207ENST00000553599 DLEC1Q9Y238 1755 aa24.12■■□□□ 1.45
PSEN1-207ENST00000553599 ANKRD18BA2A2Z9 1011 aa24.12■■□□□ 1.45
PSEN1-207ENST00000553599 FAM161AQ3B820 660 aa24.12■■□□□ 1.45
PSEN1-207ENST00000553599 CEP85Q6P2H3 762 aa24.12■■□□□ 1.45
PSEN1-207ENST00000553599 CNKSR1Q969H4 720 aa24.12■■□□□ 1.45
PSEN1-207ENST00000553599 COL11A2P13942 1736 aaPredicted RBP24.12■■□□□ 1.45
PSEN1-207ENST00000553599 SRGAP3O43295 1099 aa24.11■■□□□ 1.45
PSEN1-207ENST00000553599 HMMRO75330 724 aa24.11■■□□□ 1.45
PSEN1-207ENST00000553599 ITGA6P23229 1130 aa24.11■■□□□ 1.45
PSEN1-207ENST00000553599 KLHL34Q8N239 644 aa24.11■■□□□ 1.45
PSEN1-207ENST00000553599 FHDC1Q9C0D6 1143 aaPredicted RBP24.11■■□□□ 1.45
PSEN1-207ENST00000553599 KIAA1551Q9HCM1 1747 aa24.1■■□□□ 1.45
PSEN1-207ENST00000553599 DPEP1P16444 411 aa24.1■■□□□ 1.45
PSEN1-207ENST00000553599 GRAPQ13588 217 aa24.1■■□□□ 1.45
PSEN1-207ENST00000553599 TMC4Q7Z404 712 aa24.1■■□□□ 1.45
PSEN1-207ENST00000553599 GRAPLQ8TC17 118 aaPredicted RBP24.1■■□□□ 1.45
PSEN1-207ENST00000553599 SSH3Q8TE77 659 aa24.1■■□□□ 1.45
PSEN1-207ENST00000553599 BBOX1O75936 387 aa24.09■■□□□ 1.45
PSEN1-207ENST00000553599 CHRNA5P30532 468 aa24.09■■□□□ 1.45
PSEN1-207ENST00000553599 POLA2Q14181 598 aa24.09■■□□□ 1.45
PSEN1-207ENST00000553599 CCDC85AQ96PX6 553 aaPredicted RBP24.09■■□□□ 1.45
PSEN1-207ENST00000553599 A0A0G2JLW4 131 aa24.08■■□□□ 1.45
PSEN1-207ENST00000553599 ZNF622Q969S3 477 aaKnown RBP eCLIP24.08■■□□□ 1.45
PSEN1-207ENST00000553599 SYT17Q9BSW7 474 aa24.08■■□□□ 1.45
PSEN1-207ENST00000553599 PIM2Q9P1W9 311 aa24.08■■□□□ 1.45
PSEN1-207ENST00000553599 FBXO3Q9UK99 471 aa24.08■■□□□ 1.45
PSEN1-207ENST00000553599 KCNA3P22001 575 aa24.07■■□□□ 1.44
PSEN1-207ENST00000553599 IGHMBP2P38935 993 aaKnown RBP24.07■■□□□ 1.44
PSEN1-207ENST00000553599 RFX5P48382 616 aaPredicted RBP24.07■■□□□ 1.44
PSEN1-207ENST00000553599 RPS8P62241 208 aaKnown RBP24.07■■□□□ 1.44
PSEN1-207ENST00000553599 TAF7LQ5H9L4 462 aa24.07■■□□□ 1.44
PSEN1-207ENST00000553599 ANKRD18AQ8IVF6 992 aa24.07■■□□□ 1.44
PSEN1-207ENST00000553599 SEC31BQ9NQW1 1179 aa24.07■■□□□ 1.44
PSEN1-207ENST00000553599 PNMA6EA0A0J9YXQ4 647 aa24.06■■□□□ 1.44
PSEN1-207ENST00000553599 TTLL6Q8N841 843 aa24.06■■□□□ 1.44
PSEN1-207ENST00000553599 COPRSQ9NQ92 184 aa24.06■■□□□ 1.44
PSEN1-207ENST00000553599 PCDHB15Q9Y5E8 787 aa24.06■■□□□ 1.44
PSEN1-207ENST00000553599 PTPN12Q05209 780 aaKnown RBP24.04■■□□□ 1.44
PSEN1-207ENST00000553599 SIRT2Q8IXJ6 389 aa24.04■■□□□ 1.44
PSEN1-207ENST00000553599 CELF1Q92879 486 aaKnown RBP24.04■■□□□ 1.44
PSEN1-207ENST00000553599 MPHOSPH8Q99549 860 aa24.04■■□□□ 1.44
PSEN1-207ENST00000553599 BSDC1Q9NW68 430 aaPredicted RBP24.04■■□□□ 1.44
PSEN1-207ENST00000553599 NLGN2Q8NFZ4 835 aa24.03■■□□□ 1.44
PSEN1-207ENST00000553599 BRCA1P38398 1863 aaKnown RBP24.02■■□□□ 1.44
PSEN1-207ENST00000553599 HDAC1Q13547 482 aaPredicted RBP24.02■■□□□ 1.44
PSEN1-207ENST00000553599 DALRD3Q5D0E6 543 aaKnown RBP24.02■■□□□ 1.44
PSEN1-207ENST00000553599 PRPF40BQ6NWY9 871 aaKnown RBP24.02■■□□□ 1.44
PSEN1-207ENST00000553599 LDHAL6AQ6ZMR3 332 aa24.02■■□□□ 1.44
PSEN1-207ENST00000553599 PPEF1O14829 653 aaPredicted RBP24.01■■□□□ 1.43
PSEN1-207ENST00000553599 CIAO1O76071 339 aa24.01■■□□□ 1.43
PSEN1-207ENST00000553599 GRIPAP1Q4V328 841 aa24.01■■□□□ 1.43
PSEN1-207ENST00000553599 HSP90AB4PQ58FF6 505 aa24.01■■□□□ 1.43
PSEN1-207ENST00000553599 CC2D2BQ6DHV5 1058 aa24.01■■□□□ 1.43
PSEN1-207ENST00000553599 TMX4Q9H1E5 349 aaPredicted RBP24.01■■□□□ 1.43
PSEN1-207ENST00000553599 RWDD1Q9H446 243 aaPredicted RBP24.01■■□□□ 1.43
PSEN1-207ENST00000553599 NOP58Q9Y2X3 529 aaKnown RBP24.01■■□□□ 1.43
PSEN1-207ENST00000553599 EYA2O00167 538 aa24■■□□□ 1.43
PSEN1-207ENST00000553599 SOGA3Q5TF21 947 aa24■■□□□ 1.43
PSEN1-207ENST00000553599 SP8Q8IXZ3 490 aa24■■□□□ 1.43
PSEN1-207ENST00000553599 ZNF594Q96JF6 807 aaPredicted RBP24■■□□□ 1.43
PSEN1-207ENST00000553599 ATP6V0A2Q9Y487 856 aa24■■□□□ 1.43
PSEN1-207ENST00000553599 CNNM1Q9NRU3 951 aa23.99■■□□□ 1.43
PSEN1-207ENST00000553599 TAF1P21675 1872 aa23.98■■□□□ 1.43
PSEN1-207ENST00000553599 IL15P40933 162 aaPredicted RBP23.98■■□□□ 1.43
PSEN1-207ENST00000553599 G3BP1Q13283 466 aaKnown RBP eCLIP23.98■■□□□ 1.43
PSEN1-207ENST00000553599 KLHDC4Q8TBB5 520 aa23.98■■□□□ 1.43
PSEN1-207ENST00000553599 MROH5Q6ZUA9 1318 aa23.98■■□□□ 1.43
PSEN1-207ENST00000553599 SURF6O75683 361 aaKnown RBP23.97■■□□□ 1.43
PSEN1-207ENST00000553599 SLX4Q8IY92 1834 aa23.97■■□□□ 1.43
PSEN1-207ENST00000553599 C7orf43Q8WVR3 580 aa23.97■■□□□ 1.43
PSEN1-207ENST00000553599 PA2G4Q9UQ80 394 aaKnown RBP23.97■■□□□ 1.43
PSEN1-207ENST00000553599 RIPOR2Q9Y4F9 1068 aa23.97■■□□□ 1.43
PSEN1-207ENST00000553599 LRRC37AA6NMS7 1700 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms