RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ALDH8A1Q9H2A2 487 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-205ENST00000553474 TOGARAM1Q9Y4F4 1720 aa15.49■□□□□ 0.07
SHMT2-205ENST00000553474 MYL6BP14649 208 aa15.49■□□□□ 0.07
SHMT2-205ENST00000553474 CASTP20810 708 aaKnown RBP15.49■□□□□ 0.07
SHMT2-205ENST00000553474 CABP4P57796 275 aa15.49■□□□□ 0.07
SHMT2-205ENST00000553474 HS1BP3Q53T59 392 aa15.49■□□□□ 0.07
SHMT2-205ENST00000553474 RRAGDQ9NQL2 400 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-205ENST00000553474 HMG20BQ9P0W2 317 aa15.49■□□□□ 0.07
SHMT2-205ENST00000553474 ESPNB1AK53 854 aa15.48■□□□□ 0.07
SHMT2-205ENST00000553474 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
SHMT2-205ENST00000553474 ANKRD1Q15327 319 aa15.48■□□□□ 0.07
SHMT2-205ENST00000553474 CSPP1Q1MSJ5 1256 aa15.48■□□□□ 0.07
SHMT2-205ENST00000553474 RUFY3Q7L099 469 aa15.48■□□□□ 0.07
SHMT2-205ENST00000553474 PAPPAQ13219 1627 aa15.48■□□□□ 0.07
SHMT2-205ENST00000553474 RPAP1Q9BWH6 1393 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-205ENST00000553474 ATP5JP18859 108 aa15.47■□□□□ 0.07
SHMT2-205ENST00000553474 TSGA10IPQ3SY00 556 aa15.47■□□□□ 0.07
SHMT2-205ENST00000553474 TCHHQ07283 1943 aa15.47■□□□□ 0.07
SHMT2-205ENST00000553474 MED23Q9ULK4 1368 aa15.47■□□□□ 0.07
SHMT2-205ENST00000553474 FAM182BQ5T319 152 aa15.47■□□□□ 0.07
SHMT2-205ENST00000553474 PDRG1Q9NUG6 133 aa15.47■□□□□ 0.07
SHMT2-205ENST00000553474 SMC3Q9UQE7 1217 aa15.47■□□□□ 0.07
SHMT2-205ENST00000553474 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
SHMT2-205ENST00000553474 ITGB4P16144 1822 aa15.46■□□□□ 0.07
SHMT2-205ENST00000553474 NUP188Q5SRE5 1749 aa15.46■□□□□ 0.07
SHMT2-205ENST00000553474 STX6O43752 255 aa15.46■□□□□ 0.07
SHMT2-205ENST00000553474 ZSCAN22P10073 491 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-205ENST00000553474 RFX5P48382 616 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-205ENST00000553474 PTH1RQ03431 593 aa15.46■□□□□ 0.07
SHMT2-205ENST00000553474 NOL8Q76FK4 1167 aaKnown RBP15.46■□□□□ 0.07
SHMT2-205ENST00000553474 JAKMIP1Q96N16 626 aaKnown RBP15.46■□□□□ 0.07
SHMT2-205ENST00000553474 RBM8AQ9Y5S9 174 aaKnown RBP15.46■□□□□ 0.07
SHMT2-205ENST00000553474 ONECUT3O60422 494 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-205ENST00000553474 PTPN12Q05209 780 aaKnown RBP15.45■□□□□ 0.06
SHMT2-205ENST00000553474 KRT32Q14532 448 aa15.45■□□□□ 0.06
SHMT2-205ENST00000553474 NKX1-1Q15270 411 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-205ENST00000553474 CREB3L3Q68CJ9 461 aa15.45■□□□□ 0.06
SHMT2-205ENST00000553474 PRPF40BQ6NWY9 871 aaKnown RBP15.45■□□□□ 0.06
SHMT2-205ENST00000553474 FSD1Q9BTV5 496 aa15.45■□□□□ 0.06
SHMT2-205ENST00000553474 TMEM63CQ9P1W3 806 aa15.45■□□□□ 0.06
SHMT2-205ENST00000553474 LETM1O95202 739 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-205ENST00000553474 KCNJ4P48050 445 aa15.44■□□□□ 0.06
SHMT2-205ENST00000553474 NMIQ13287 307 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-205ENST00000553474 TNNI3KQ59H18 835 aa15.44■□□□□ 0.06
SHMT2-205ENST00000553474 MARCH10Q8NA82 808 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-205ENST00000553474 CCDC8Q9H0W5 538 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-205ENST00000553474 GPR108Q9NPR9 543 aa15.44■□□□□ 0.06
SHMT2-205ENST00000553474 FPGT-TNNI3KV9GXZ4 949 aa15.44■□□□□ 0.06
SHMT2-205ENST00000553474 SYT1P21579 422 aa15.44■□□□□ 0.06
SHMT2-205ENST00000553474 CASP7P55210 303 aa15.44■□□□□ 0.06
SHMT2-205ENST00000553474 PDLIM2Q96JY6 352 aa15.44■□□□□ 0.06
SHMT2-205ENST00000553474 SBF2Q86WG5 1849 aa15.44■□□□□ 0.06
SHMT2-205ENST00000553474 SPEF2Q9C093 1822 aa15.43■□□□□ 0.06
SHMT2-205ENST00000553474 A0A087WZG4 1122 aa15.43■□□□□ 0.06
SHMT2-205ENST00000553474 PDCP20941 246 aa15.43■□□□□ 0.06
SHMT2-205ENST00000553474 PRIM1P49642 420 aaKnown RBP15.43■□□□□ 0.06
SHMT2-205ENST00000553474 EPHA10Q5JZY3 1008 aa15.43■□□□□ 0.06
SHMT2-205ENST00000553474 USPL1Q5W0Q7 1092 aa15.43■□□□□ 0.06
SHMT2-205ENST00000553474 KRT27Q7Z3Y8 459 aa15.43■□□□□ 0.06
SHMT2-205ENST00000553474 FAM184AQ8NB25 1140 aa15.43■□□□□ 0.06
SHMT2-205ENST00000553474 SIL1Q9H173 461 aa15.43■□□□□ 0.06
SHMT2-205ENST00000553474 ATG3Q9NT62 314 aa15.43■□□□□ 0.06
SHMT2-205ENST00000553474 F13A1P00488 732 aa15.42■□□□□ 0.06
SHMT2-205ENST00000553474 UBE3BQ7Z3V4 1068 aa15.42■□□□□ 0.06
SHMT2-205ENST00000553474 BOLA2Q9H3K6 86 aa15.42■□□□□ 0.06
SHMT2-205ENST00000553474 H7C1W4 665 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 SLC27A2O14975 620 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 UBE2HP62256 183 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 ADCK5Q3MIX3 580 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 BLOC1S2Q6QNY1 142 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 CCDC191Q8NCU4 936 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 FAM227BQ96M60 508 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 TLR7Q9NYK1 1049 aaKnown RBP15.41■□□□□ 0.06
SHMT2-205ENST00000553474 KCPQ6ZWJ8 1503 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 A0A0D9SFI3 127 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 USP48Q86UV5 1035 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 SYTL4Q96C24 671 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-205ENST00000553474 ACSBG1Q96GR2 724 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 HAUS7Q99871 368 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 RBSNQ9H1K0 784 aa15.41■□□□□ 0.06
SHMT2-205ENST00000553474 DBNLQ9UJU6 430 aaKnown RBP15.41■□□□□ 0.06
SHMT2-205ENST00000553474 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-205ENST00000553474 NHSQ6T4R5 1651 aa15.4■□□□□ 0.06
SHMT2-205ENST00000553474 TJP1Q07157 1748 aa15.4■□□□□ 0.06
SHMT2-205ENST00000553474 SYCE3A1L190 88 aa15.4■□□□□ 0.06
SHMT2-205ENST00000553474 FOXD4L5Q5VV16 416 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-205ENST00000553474 ZSCAN30Q86W11 494 aa15.4■□□□□ 0.06
SHMT2-205ENST00000553474 FOXD4L4Q8WXT5 416 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-205ENST00000553474 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-205ENST00000553474 GJB2P29033 226 aa15.39■□□□□ 0.05
SHMT2-205ENST00000553474 TSPY26PQ9H489 355 aa15.39■□□□□ 0.05
SHMT2-205ENST00000553474 RBM27Q9P2N5 1060 aaKnown RBP15.39■□□□□ 0.05
SHMT2-205ENST00000553474 FBXO3Q9UK99 471 aa15.39■□□□□ 0.05
SHMT2-205ENST00000553474 U3KPZ7 1027 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-205ENST00000553474 PALLDQ8WX93 1383 aa15.39■□□□□ 0.05
SHMT2-205ENST00000553474 TAF5LO75529 589 aa15.39■□□□□ 0.05
SHMT2-205ENST00000553474 RPS6KB1P23443 525 aa15.39■□□□□ 0.05
SHMT2-205ENST00000553474 IL15P40933 162 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-205ENST00000553474 TFCP2Q12800 502 aa15.39■□□□□ 0.05
SHMT2-205ENST00000553474 CCDC183Q5T5S1 534 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms