RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 SUPT16HQ9Y5B9 1047 aaKnown RBP18.72■□□□□ 0.59
MTHFD1-204ENST00000553405 CTSWP56202 376 aa18.71■□□□□ 0.59
MTHFD1-204ENST00000553405 COG6Q9Y2V7 657 aa18.71■□□□□ 0.59
MTHFD1-204ENST00000553405 TAF1P21675 1872 aa18.71■□□□□ 0.59
MTHFD1-204ENST00000553405 NPHP1O15259 732 aa18.7■□□□□ 0.58
MTHFD1-204ENST00000553405 STYK1Q6J9G0 422 aa18.7■□□□□ 0.58
MTHFD1-204ENST00000553405 ITPRIPQ8IWB1 547 aa18.7■□□□□ 0.58
MTHFD1-204ENST00000553405 KLHL34Q8N239 644 aa18.7■□□□□ 0.58
MTHFD1-204ENST00000553405 H0YIN7 160 aa18.69■□□□□ 0.58
MTHFD1-204ENST00000553405 NPR1P16066 1061 aa18.69■□□□□ 0.58
MTHFD1-204ENST00000553405 MASTLQ96GX5 879 aa18.69■□□□□ 0.58
MTHFD1-204ENST00000553405 BICC1Q9H694 974 aaKnown RBP18.69■□□□□ 0.58
MTHFD1-204ENST00000553405 SLX4Q8IY92 1834 aa18.69■□□□□ 0.58
MTHFD1-204ENST00000553405 SNED1Q8TER0 1413 aa18.68■□□□□ 0.58
MTHFD1-204ENST00000553405 UBTFL1P0CB47 393 aaPredicted RBP18.68■□□□□ 0.58
MTHFD1-204ENST00000553405 HSP90B1P14625 803 aaKnown RBP18.68■□□□□ 0.58
MTHFD1-204ENST00000553405 CRAMP1Q96RY5 1269 aa18.68■□□□□ 0.58
MTHFD1-204ENST00000553405 GREM2Q9H772 168 aa18.68■□□□□ 0.58
MTHFD1-204ENST00000553405 ZBTB40Q9NUA8 1239 aa18.68■□□□□ 0.58
MTHFD1-204ENST00000553405 LRRFIP2Q9Y608 721 aaKnown RBP18.68■□□□□ 0.58
MTHFD1-204ENST00000553405 GNAI3P08754 354 aa18.67■□□□□ 0.58
MTHFD1-204ENST00000553405 SLC51AQ86UW1 340 aa18.67■□□□□ 0.58
MTHFD1-204ENST00000553405 SEC31BQ9NQW1 1179 aa18.67■□□□□ 0.58
MTHFD1-204ENST00000553405 DDX19BQ9UMR2 479 aa18.67■□□□□ 0.58
MTHFD1-204ENST00000553405 LRRC37AA6NMS7 1700 aa18.66■□□□□ 0.58
MTHFD1-204ENST00000553405 ARFGEF1Q9Y6D6 1849 aa18.66■□□□□ 0.58
MTHFD1-204ENST00000553405 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
MTHFD1-204ENST00000553405 LMBR1LQ6UX01 489 aa18.66■□□□□ 0.58
MTHFD1-204ENST00000553405 C7orf43Q8WVR3 580 aa18.66■□□□□ 0.58
MTHFD1-204ENST00000553405 CACNA1SQ13698 1873 aa18.65■□□□□ 0.58
MTHFD1-204ENST00000553405 MTX1Q13505 466 aa18.65■□□□□ 0.58
MTHFD1-204ENST00000553405 CCDC152Q4G0S7 254 aa18.65■□□□□ 0.58
MTHFD1-204ENST00000553405 CELF1Q92879 486 aaKnown RBP18.65■□□□□ 0.58
MTHFD1-204ENST00000553405 CCDC85AQ96PX6 553 aaPredicted RBP18.65■□□□□ 0.58
MTHFD1-204ENST00000553405 PIM2Q9P1W9 311 aa18.65■□□□□ 0.58
MTHFD1-204ENST00000553405 RFX5P48382 616 aaPredicted RBP18.64■□□□□ 0.57
MTHFD1-204ENST00000553405 PRPF40BQ6NWY9 871 aaKnown RBP18.64■□□□□ 0.57
MTHFD1-204ENST00000553405 RPGRQ92834 1020 aaKnown RBP18.64■□□□□ 0.57
MTHFD1-204ENST00000553405 CRBNQ96SW2 442 aa18.64■□□□□ 0.57
MTHFD1-204ENST00000553405 GNAI2P04899 355 aa18.63■□□□□ 0.57
MTHFD1-204ENST00000553405 YBX3P16989 372 aaKnown RBP eCLIP18.63■□□□□ 0.57
MTHFD1-204ENST00000553405 GRAPQ13588 217 aa18.63■□□□□ 0.57
MTHFD1-204ENST00000553405 TTLL6Q8N841 843 aa18.63■□□□□ 0.57
MTHFD1-204ENST00000553405 GRAPLQ8TC17 118 aaPredicted RBP18.63■□□□□ 0.57
MTHFD1-204ENST00000553405 CNKSR1Q969H4 720 aa18.63■□□□□ 0.57
MTHFD1-204ENST00000553405 ZNF622Q969S3 477 aaKnown RBP eCLIP18.63■□□□□ 0.57
MTHFD1-204ENST00000553405 RBM17Q96I25 401 aaKnown RBP18.63■□□□□ 0.57
MTHFD1-204ENST00000553405 C1orf115Q9H7X2 142 aa18.63■□□□□ 0.57
MTHFD1-204ENST00000553405 LTBP1Q14766 1721 aa18.63■□□□□ 0.57
MTHFD1-204ENST00000553405 ITGA6P23229 1130 aa18.62■□□□□ 0.57
MTHFD1-204ENST00000553405 DDX46Q7L014 1031 aaKnown RBP18.62■□□□□ 0.57
MTHFD1-204ENST00000553405 ALDH1B1P30837 517 aa18.61■□□□□ 0.57
MTHFD1-204ENST00000553405 DALRD3Q5D0E6 543 aaKnown RBP18.61■□□□□ 0.57
MTHFD1-204ENST00000553405 SPEF2Q9C093 1822 aa18.6■□□□□ 0.57
MTHFD1-204ENST00000553405 OLFM4Q6UX06 510 aa18.6■□□□□ 0.57
MTHFD1-204ENST00000553405 WWC3Q9ULE0 1092 aa18.6■□□□□ 0.57
MTHFD1-204ENST00000553405 HDAC5Q9UQL6 1122 aa18.6■□□□□ 0.57
MTHFD1-204ENST00000553405 PNMA6EA0A0J9YXQ4 647 aa18.59■□□□□ 0.57
MTHFD1-204ENST00000553405 BBOX1O75936 387 aa18.59■□□□□ 0.57
MTHFD1-204ENST00000553405 CENPBP07199 599 aaPredicted RBP18.59■□□□□ 0.57
MTHFD1-204ENST00000553405 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
MTHFD1-204ENST00000553405 CEP85Q6P2H3 762 aa18.59■□□□□ 0.57
MTHFD1-204ENST00000553405 SIRT2Q8IXJ6 389 aa18.59■□□□□ 0.57
MTHFD1-204ENST00000553405 A0A1B0GUL6 1792 aa18.59■□□□□ 0.57
MTHFD1-204ENST00000553405 DUOX1Q9NRD9 1551 aa18.59■□□□□ 0.57
MTHFD1-204ENST00000553405 FER1L6Q2WGJ9 1857 aa18.58■□□□□ 0.57
MTHFD1-204ENST00000553405 PTPN12Q05209 780 aaKnown RBP18.58■□□□□ 0.56
MTHFD1-204ENST00000553405 IFIT5Q13325 482 aaKnown RBP18.58■□□□□ 0.56
MTHFD1-204ENST00000553405 POLA2Q14181 598 aa18.58■□□□□ 0.56
MTHFD1-204ENST00000553405 SSH3Q8TE77 659 aa18.58■□□□□ 0.56
MTHFD1-204ENST00000553405 ZNF594Q96JF6 807 aaPredicted RBP18.58■□□□□ 0.56
MTHFD1-204ENST00000553405 ATP6V0A2Q9Y487 856 aa18.58■□□□□ 0.56
MTHFD1-204ENST00000553405 ANKRD18BA2A2Z9 1011 aa18.57■□□□□ 0.56
MTHFD1-204ENST00000553405 PPEF1O14829 653 aaPredicted RBP18.57■□□□□ 0.56
MTHFD1-204ENST00000553405 ATP8B2P98198 1209 aa18.57■□□□□ 0.56
MTHFD1-204ENST00000553405 EXOC6Q8TAG9 804 aa18.57■□□□□ 0.56
MTHFD1-204ENST00000553405 KLHDC4Q8TBB5 520 aa18.57■□□□□ 0.56
MTHFD1-204ENST00000553405 CDC5LQ99459 802 aaKnown RBP18.57■□□□□ 0.56
MTHFD1-204ENST00000553405 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
MTHFD1-204ENST00000553405 BCS1LQ9Y276 419 aa18.57■□□□□ 0.56
MTHFD1-204ENST00000553405 C21orf2O43822 256 aa18.56■□□□□ 0.56
MTHFD1-204ENST00000553405 TMC4Q7Z404 712 aa18.56■□□□□ 0.56
MTHFD1-204ENST00000553405 SP8Q8IXZ3 490 aa18.56■□□□□ 0.56
MTHFD1-204ENST00000553405 CHMP4BQ9H444 224 aaKnown RBP18.56■□□□□ 0.56
MTHFD1-204ENST00000553405 COPRSQ9NQ92 184 aa18.56■□□□□ 0.56
MTHFD1-204ENST00000553405 CHMP3Q9Y3E7 222 aa18.56■□□□□ 0.56
MTHFD1-204ENST00000553405 SRGAP3O43295 1099 aa18.55■□□□□ 0.56
MTHFD1-204ENST00000553405 IRX6P78412 446 aaPredicted RBP18.55■□□□□ 0.56
MTHFD1-204ENST00000553405 CCDC57Q2TAC2 916 aa18.55■□□□□ 0.56
MTHFD1-204ENST00000553405 ANKRD18AQ8IVF6 992 aa18.55■□□□□ 0.56
MTHFD1-204ENST00000553405 PUS3Q9BZE2 481 aaKnown RBP18.55■□□□□ 0.56
MTHFD1-204ENST00000553405 PCDHB15Q9Y5E8 787 aa18.55■□□□□ 0.56
MTHFD1-204ENST00000553405 NFKBIEO00221 500 aa18.54■□□□□ 0.56
MTHFD1-204ENST00000553405 ATG9AQ7Z3C6 839 aa18.54■□□□□ 0.56
MTHFD1-204ENST00000553405 PA2G4Q9UQ80 394 aaKnown RBP18.54■□□□□ 0.56
MTHFD1-204ENST00000553405 RIPOR2Q9Y4F9 1068 aa18.54■□□□□ 0.56
MTHFD1-204ENST00000553405 PRELPP51888 382 aa18.53■□□□□ 0.56
MTHFD1-204ENST00000553405 LRRC24Q50LG9 513 aa18.53■□□□□ 0.56
MTHFD1-204ENST00000553405 RPAP2Q8IXW5 612 aaPredicted RBP18.53■□□□□ 0.56
MTHFD1-204ENST00000553405 MINPP1Q9UNW1 487 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms