RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 RTL5Q5HYW3 569 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-207ENST00000553290 LARGE2Q8N3Y3 721 aa16.63■□□□□ 0.25
ACTN1-207ENST00000553290 RTFDC1Q9BY42 306 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-207ENST00000553290 CWC25Q9NXE8 425 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-207ENST00000553290 CACNA1FO60840 1977 aa16.62■□□□□ 0.25
ACTN1-207ENST00000553290 PI4KAP2A4QPH2 592 aa16.62■□□□□ 0.25
ACTN1-207ENST00000553290 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
ACTN1-207ENST00000553290 EIF6P56537 245 aaKnown RBP16.62■□□□□ 0.25
ACTN1-207ENST00000553290 NEXNQ0ZGT2 675 aa16.62■□□□□ 0.25
ACTN1-207ENST00000553290 DPP8Q6V1X1 898 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-207ENST00000553290 SLC51AQ86UW1 340 aa16.62■□□□□ 0.25
ACTN1-207ENST00000553290 GPC2Q8N158 579 aa16.62■□□□□ 0.25
ACTN1-207ENST00000553290 MPNDQ8N594 471 aa16.62■□□□□ 0.25
ACTN1-207ENST00000553290 PI4KAP1Q8N8J0 262 aa16.62■□□□□ 0.25
ACTN1-207ENST00000553290 TAF1P21675 1872 aa16.62■□□□□ 0.25
ACTN1-207ENST00000553290 PPIP5K2O43314 1243 aa16.61■□□□□ 0.25
ACTN1-207ENST00000553290 EXOSC9Q06265 439 aaKnown RBP16.61■□□□□ 0.25
ACTN1-207ENST00000553290 NIM1KQ8IY84 436 aa16.61■□□□□ 0.25
ACTN1-207ENST00000553290 MYH16Q9H6N6 1097 aa16.61■□□□□ 0.25
ACTN1-207ENST00000553290 VAMP4O75379 141 aa16.6■□□□□ 0.25
ACTN1-207ENST00000553290 TAF1DQ9H5J8 278 aaPredicted RBP16.6■□□□□ 0.25
ACTN1-207ENST00000553290 HACL1Q9UJ83 578 aa16.6■□□□□ 0.25
ACTN1-207ENST00000553290 COL4A5P29400 1685 aa16.59■□□□□ 0.25
ACTN1-207ENST00000553290 PDE8AO60658 829 aa16.59■□□□□ 0.25
ACTN1-207ENST00000553290 AOC3Q16853 763 aa16.59■□□□□ 0.25
ACTN1-207ENST00000553290 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
ACTN1-207ENST00000553290 G2E3Q7L622 706 aa16.59■□□□□ 0.25
ACTN1-207ENST00000553290 CELF1Q92879 486 aaKnown RBP16.59■□□□□ 0.25
ACTN1-207ENST00000553290 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
ACTN1-207ENST00000553290 IGKV5-2P06315 115 aa16.58■□□□□ 0.24
ACTN1-207ENST00000553290 RPS8P62241 208 aaKnown RBP16.58■□□□□ 0.24
ACTN1-207ENST00000553290 FLIIQ13045 1269 aa16.58■□□□□ 0.24
ACTN1-207ENST00000553290 CCDC152Q4G0S7 254 aa16.58■□□□□ 0.24
ACTN1-207ENST00000553290 LDHDQ86WU2 507 aa16.58■□□□□ 0.24
ACTN1-207ENST00000553290 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
ACTN1-207ENST00000553290 CDHR2Q9BYE9 1310 aa16.58■□□□□ 0.24
ACTN1-207ENST00000553290 KIAA2012Q0VF49 1180 aa16.57■□□□□ 0.24
ACTN1-207ENST00000553290 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
ACTN1-207ENST00000553290 DNAJC5GQ8N7S2 189 aa16.57■□□□□ 0.24
ACTN1-207ENST00000553290 GJA3Q9Y6H8 435 aa16.57■□□□□ 0.24
ACTN1-207ENST00000553290 NEURL1BA8MQ27 555 aa16.56■□□□□ 0.24
ACTN1-207ENST00000553290 POTEIP0CG38 1075 aa16.56■□□□□ 0.24
ACTN1-207ENST00000553290 POTEJP0CG39 1038 aa16.56■□□□□ 0.24
ACTN1-207ENST00000553290 EPHX2P34913 555 aa16.56■□□□□ 0.24
ACTN1-207ENST00000553290 PNMA8AQ86V59 439 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-207ENST00000553290 JARID2Q92833 1246 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-207ENST00000553290 ZNRF3Q9ULT6 936 aa16.56■□□□□ 0.24
ACTN1-207ENST00000553290 ZNF521Q96K83 1311 aa16.55■□□□□ 0.24
ACTN1-207ENST00000553290 LMOD1P29536 600 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-207ENST00000553290 CWF19L2Q2TBE0 894 aaKnown RBP16.55■□□□□ 0.24
ACTN1-207ENST00000553290 EAPPQ56P03 285 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-207ENST00000553290 DNAAF4Q8WXU2 420 aa16.55■□□□□ 0.24
ACTN1-207ENST00000553290 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
ACTN1-207ENST00000553290 NSFL1CQ9UNZ2 370 aaKnown RBP16.55■□□□□ 0.24
ACTN1-207ENST00000553290 CTSWP56202 376 aa16.54■□□□□ 0.24
ACTN1-207ENST00000553290 DUOX1Q9NRD9 1551 aa16.54■□□□□ 0.24
ACTN1-207ENST00000553290 MYH3P11055 1940 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 H7C1W4 665 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 SCNN1DP51172 638 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 GPSM2P81274 684 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 HTRA3P83110 453 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 CXCL9Q07325 125 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 GCKRQ14397 625 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 LINS1Q8NG48 757 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 KLRG1Q96E93 195 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 EYA3Q99504 573 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 CLEC11AQ9Y240 323 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 COL4A1P02462 1669 aa16.53■□□□□ 0.24
ACTN1-207ENST00000553290 ADAMTSL1Q8N6G6 1762 aa16.52■□□□□ 0.24
ACTN1-207ENST00000553290 C6orf229H3BNL8 230 aa16.52■□□□□ 0.24
ACTN1-207ENST00000553290 TNIP1Q15025 636 aa16.52■□□□□ 0.24
ACTN1-207ENST00000553290 CIAPIN1Q6FI81 312 aa16.52■□□□□ 0.24
ACTN1-207ENST00000553290 UBE3BQ7Z3V4 1068 aa16.52■□□□□ 0.24
ACTN1-207ENST00000553290 ANKRD18AQ8IVF6 992 aa16.52■□□□□ 0.24
ACTN1-207ENST00000553290 TTLL11Q8NHH1 800 aa16.52■□□□□ 0.24
ACTN1-207ENST00000553290 CCDC85AQ96PX6 553 aaPredicted RBP16.52■□□□□ 0.24
ACTN1-207ENST00000553290 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.24
ACTN1-207ENST00000553290 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
ACTN1-207ENST00000553290 POLLQ9UGP5 575 aa16.52■□□□□ 0.24
ACTN1-207ENST00000553290 CCER2I3L3R5 266 aa16.51■□□□□ 0.23
ACTN1-207ENST00000553290 LTBP1Q14766 1721 aa16.5■□□□□ 0.23
ACTN1-207ENST00000553290 EPS15P42566 896 aa16.5■□□□□ 0.23
ACTN1-207ENST00000553290 USP50Q70EL3 339 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-207ENST00000553290 TBC1D16Q8TBP0 767 aa16.5■□□□□ 0.23
ACTN1-207ENST00000553290 PLA2G12BQ9BX93 195 aa16.5■□□□□ 0.23
ACTN1-207ENST00000553290 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
ACTN1-207ENST00000553290 ANKIB1Q9P2G1 1089 aa16.5■□□□□ 0.23
ACTN1-207ENST00000553290 RTL9Q8NET4 1388 aa16.5■□□□□ 0.23
ACTN1-207ENST00000553290 PASKQ96RG2 1323 aa16.49■□□□□ 0.23
ACTN1-207ENST00000553290 YDJCA8MPS7 323 aa16.49■□□□□ 0.23
ACTN1-207ENST00000553290 E9PSI1 815 aa16.49■□□□□ 0.23
ACTN1-207ENST00000553290 RIMBP2O15034 1052 aa16.49■□□□□ 0.23
ACTN1-207ENST00000553290 RAD17O75943 681 aa16.49■□□□□ 0.23
ACTN1-207ENST00000553290 ITGBL1O95965 494 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-207ENST00000553290 ZC3H12CQ9C0D7 883 aaKnown RBP16.49■□□□□ 0.23
ACTN1-207ENST00000553290 CREBZFQ9NS37 354 aa16.49■□□□□ 0.23
ACTN1-207ENST00000553290 GGA1Q9UJY5 639 aa16.49■□□□□ 0.23
ACTN1-207ENST00000553290 F6X3S4 739 aa16.48■□□□□ 0.23
ACTN1-207ENST00000553290 GMPSP49915 693 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms