RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 INTS3Q68E01 1043 aaKnown RBP9.77□□□□□ -0.85
NPAS3-213ENST00000552874 PPP1R42Q7Z4L9 355 aa9.77□□□□□ -0.85
NPAS3-213ENST00000552874 SLC51AQ86UW1 340 aa9.77□□□□□ -0.85
NPAS3-213ENST00000552874 ZBTB38Q8NAP3 1195 aaPredicted RBP9.77□□□□□ -0.85
NPAS3-213ENST00000552874 FAM89AQ96GI7 184 aa9.77□□□□□ -0.85
NPAS3-213ENST00000552874 UTP14AQ9BVJ6 771 aaKnown RBP9.77□□□□□ -0.85
NPAS3-213ENST00000552874 PLA2G12BQ9BX93 195 aa9.77□□□□□ -0.85
NPAS3-213ENST00000552874 COL4A5P29400 1685 aa9.77□□□□□ -0.85
NPAS3-213ENST00000552874 FAM177BA6PVY3 158 aa9.76□□□□□ -0.85
NPAS3-213ENST00000552874 SRGNP10124 158 aa9.76□□□□□ -0.85
NPAS3-213ENST00000552874 DPEP1P16444 411 aa9.76□□□□□ -0.85
NPAS3-213ENST00000552874 CHRNA5P30532 468 aa9.76□□□□□ -0.85
NPAS3-213ENST00000552874 TGFB2P61812 414 aa9.76□□□□□ -0.85
NPAS3-213ENST00000552874 TPTE2Q6XPS3 522 aa9.76□□□□□ -0.85
NPAS3-213ENST00000552874 API5Q9BZZ5 524 aaKnown RBP9.76□□□□□ -0.85
NPAS3-213ENST00000552874 HCLS1P14317 486 aaPredicted RBP9.75□□□□□ -0.85
NPAS3-213ENST00000552874 HOXA10P31260 410 aaPredicted RBP9.75□□□□□ -0.85
NPAS3-213ENST00000552874 ST5P78524 1137 aa9.75□□□□□ -0.85
NPAS3-213ENST00000552874 EPHA10Q5JZY3 1008 aa9.75□□□□□ -0.85
NPAS3-213ENST00000552874 ZKSCAN2Q63HK3 967 aa9.75□□□□□ -0.85
NPAS3-213ENST00000552874 SRCIN1Q9C0H9 1055 aa9.75□□□□□ -0.85
NPAS3-213ENST00000552874 USP44Q9H0E7 712 aa9.75□□□□□ -0.85
NPAS3-213ENST00000552874 TRMT112Q9UI30 125 aaKnown RBP9.75□□□□□ -0.85
NPAS3-213ENST00000552874 GRM8O00222 908 aa9.74□□□□□ -0.85
NPAS3-213ENST00000552874 IRS4O14654 1257 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-213ENST00000552874 NBPF7P0C2Y1 421 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-213ENST00000552874 YBX3P16989 372 aaKnown RBP eCLIP9.74□□□□□ -0.85
NPAS3-213ENST00000552874 CCT4P50991 539 aaKnown RBP9.74□□□□□ -0.85
NPAS3-213ENST00000552874 FOXO4P98177 505 aa9.74□□□□□ -0.85
NPAS3-213ENST00000552874 EVX2Q03828 476 aa9.74□□□□□ -0.85
NPAS3-213ENST00000552874 NEXNQ0ZGT2 675 aa9.74□□□□□ -0.85
NPAS3-213ENST00000552874 SF3B3Q15393 1217 aaKnown RBP9.74□□□□□ -0.85
NPAS3-213ENST00000552874 C20orf194Q5TEA3 1177 aa9.74□□□□□ -0.85
NPAS3-213ENST00000552874 UBE3BQ7Z3V4 1068 aa9.74□□□□□ -0.85
NPAS3-213ENST00000552874 TMEM57Q8N5G2 664 aa9.74□□□□□ -0.85
NPAS3-213ENST00000552874 ANKRD44Q8N8A2 993 aa9.74□□□□□ -0.85
NPAS3-213ENST00000552874 JARID2Q92833 1246 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-213ENST00000552874 PPP1R1BQ9UD71 204 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-213ENST00000552874 A0A0G2JLW4 131 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 PLIN1O60240 522 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 CSF1RP07333 972 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 PRR29P0C7W0 189 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 PDE6BP35913 854 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 RRP1P56182 461 aaKnown RBP9.73□□□□□ -0.85
NPAS3-213ENST00000552874 CTSWP56202 376 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 RABL6Q3YEC7 729 aaPredicted RBP9.73□□□□□ -0.85
NPAS3-213ENST00000552874 STYK1Q6J9G0 422 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 SLC4A10Q6U841 1118 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 C2CD5Q86YS7 1000 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 C7orf43Q8WVR3 580 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 FRAT1Q92837 279 aaPredicted RBP9.73□□□□□ -0.85
NPAS3-213ENST00000552874 SUCLG2Q96I99 432 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 MEIS3Q99687 375 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 PDZRN3Q9UPQ7 1066 aa9.73□□□□□ -0.85
NPAS3-213ENST00000552874 IPO8O15397 1037 aaKnown RBP9.72□□□□□ -0.85
NPAS3-213ENST00000552874 PDE8AO60658 829 aa9.72□□□□□ -0.85
NPAS3-213ENST00000552874 RTL5Q5HYW3 569 aaPredicted RBP9.72□□□□□ -0.85
NPAS3-213ENST00000552874 DZIP1LQ8IYY4 767 aaKnown RBP9.72□□□□□ -0.85
NPAS3-213ENST00000552874 TTLL11Q8NHH1 800 aa9.72□□□□□ -0.85
NPAS3-213ENST00000552874 PANK1Q8TE04 598 aa9.72□□□□□ -0.85
NPAS3-213ENST00000552874 CLUAP1Q96AJ1 413 aa9.72□□□□□ -0.85
NPAS3-213ENST00000552874 MASTLQ96GX5 879 aa9.72□□□□□ -0.85
NPAS3-213ENST00000552874 NPR1P16066 1061 aa9.71□□□□□ -0.86
NPAS3-213ENST00000552874 CHADLQ6NUI6 762 aa9.71□□□□□ -0.86
NPAS3-213ENST00000552874 PRPF40BQ6NWY9 871 aaKnown RBP9.71□□□□□ -0.86
NPAS3-213ENST00000552874 CRAMP1Q96RY5 1269 aa9.71□□□□□ -0.86
NPAS3-213ENST00000552874 AKAP11Q9UKA4 1901 aa9.71□□□□□ -0.86
NPAS3-213ENST00000552874 MYO5AQ9Y4I1 1855 aaKnown RBP9.7□□□□□ -0.86
NPAS3-213ENST00000552874 RFX5P48382 616 aaPredicted RBP9.7□□□□□ -0.86
NPAS3-213ENST00000552874 PRELPP51888 382 aa9.7□□□□□ -0.86
NPAS3-213ENST00000552874 PDE3AQ14432 1141 aa9.7□□□□□ -0.86
NPAS3-213ENST00000552874 MVPQ14764 893 aaKnown RBP9.7□□□□□ -0.86
NPAS3-213ENST00000552874 FAM161AQ3B820 660 aa9.7□□□□□ -0.86
NPAS3-213ENST00000552874 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
NPAS3-213ENST00000552874 CELF1Q92879 486 aaKnown RBP9.7□□□□□ -0.86
NPAS3-213ENST00000552874 BICC1Q9H694 974 aaKnown RBP9.7□□□□□ -0.86
NPAS3-213ENST00000552874 GREM2Q9H772 168 aa9.7□□□□□ -0.86
NPAS3-213ENST00000552874 SEC31BQ9NQW1 1179 aa9.7□□□□□ -0.86
NPAS3-213ENST00000552874 H0YIN7 160 aa9.69□□□□□ -0.86
NPAS3-213ENST00000552874 NFKBIEO00221 500 aa9.69□□□□□ -0.86
NPAS3-213ENST00000552874 ZBTB7BO15156 539 aaPredicted RBP9.69□□□□□ -0.86
NPAS3-213ENST00000552874 MTX1Q13505 466 aa9.69□□□□□ -0.86
NPAS3-213ENST00000552874 GRAPQ13588 217 aa9.69□□□□□ -0.86
NPAS3-213ENST00000552874 OLFM4Q6UX06 510 aa9.69□□□□□ -0.86
NPAS3-213ENST00000552874 GRAPLQ8TC17 118 aaPredicted RBP9.69□□□□□ -0.86
NPAS3-213ENST00000552874 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
NPAS3-213ENST00000552874 PIM2Q9P1W9 311 aa9.69□□□□□ -0.86
NPAS3-213ENST00000552874 DOCK2Q92608 1830 aa9.68□□□□□ -0.86
NPAS3-213ENST00000552874 LTBP3Q9NS15 1303 aa9.68□□□□□ -0.86
NPAS3-213ENST00000552874 C19orf67A6NJJ6 358 aa9.68□□□□□ -0.86
NPAS3-213ENST00000552874 GTF2E1P29083 439 aaPredicted RBP9.68□□□□□ -0.86
NPAS3-213ENST00000552874 TTLL6Q8N841 843 aa9.68□□□□□ -0.86
NPAS3-213ENST00000552874 C9orf78Q9NZ63 289 aaPredicted RBP9.68□□□□□ -0.86
NPAS3-213ENST00000552874 LRRFIP2Q9Y608 721 aaKnown RBP9.68□□□□□ -0.86
NPAS3-213ENST00000552874 ECM29Q5VYK3 1845 aa9.68□□□□□ -0.86
NPAS3-213ENST00000552874 ADAMTSL1Q8N6G6 1762 aa9.68□□□□□ -0.86
NPAS3-213ENST00000552874 IRS2Q9Y4H2 1338 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 MYH7P12883 1935 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 PPEF1O14829 653 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms