RNA–Protein interactions for RNA: ENST00000552774.1

PDE1B-208, Transcript of phosphodiesterase 1B, humanhuman

TSL 4

Gene PDE1B, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-208ENST00000552774 CCDC152Q4G0S7 254 aa15.32■□□□□ 0.04
PDE1B-208ENST00000552774 TTLL6Q8N841 843 aa15.32■□□□□ 0.04
PDE1B-208ENST00000552774 TTLL11Q8NHH1 800 aa15.32■□□□□ 0.04
PDE1B-208ENST00000552774 RBM17Q96I25 401 aaKnown RBP15.32■□□□□ 0.04
PDE1B-208ENST00000552774 SUCLG2Q96I99 432 aa15.32■□□□□ 0.04
PDE1B-208ENST00000552774 MEIS3Q99687 375 aa15.32■□□□□ 0.04
PDE1B-208ENST00000552774 CSF1RP07333 972 aa15.31■□□□□ 0.04
PDE1B-208ENST00000552774 ALDH1B1P30837 517 aa15.31■□□□□ 0.04
PDE1B-208ENST00000552774 FOXO4P98177 505 aa15.31■□□□□ 0.04
PDE1B-208ENST00000552774 MVPQ14764 893 aaKnown RBP15.31■□□□□ 0.04
PDE1B-208ENST00000552774 DDX46Q7L014 1031 aaKnown RBP15.31■□□□□ 0.04
PDE1B-208ENST00000552774 CRAMP1Q96RY5 1269 aa15.31■□□□□ 0.04
PDE1B-208ENST00000552774 DALRD3Q5D0E6 543 aaKnown RBP15.3■□□□□ 0.04
PDE1B-208ENST00000552774 C20orf194Q5TEA3 1177 aa15.3■□□□□ 0.04
PDE1B-208ENST00000552774 KAZALD1Q96I82 304 aa15.3■□□□□ 0.04
PDE1B-208ENST00000552774 DDX19BQ9UMR2 479 aa15.3■□□□□ 0.04
PDE1B-208ENST00000552774 COG6Q9Y2V7 657 aa15.3■□□□□ 0.04
PDE1B-208ENST00000552774 SUPT16HQ9Y5B9 1047 aaKnown RBP15.3■□□□□ 0.04
PDE1B-208ENST00000552774 RTL9Q8NET4 1388 aa15.29■□□□□ 0.04
PDE1B-208ENST00000552774 ZBTB7BO15156 539 aaPredicted RBP15.29■□□□□ 0.04
PDE1B-208ENST00000552774 EPHA10Q5JZY3 1008 aa15.29■□□□□ 0.04
PDE1B-208ENST00000552774 LMBR1LQ6UX01 489 aa15.29■□□□□ 0.04
PDE1B-208ENST00000552774 CCDC85AQ96PX6 553 aaPredicted RBP15.29■□□□□ 0.04
PDE1B-208ENST00000552774 CHMP4BQ9H444 224 aaKnown RBP15.29■□□□□ 0.04
PDE1B-208ENST00000552774 BICC1Q9H694 974 aaKnown RBP15.29■□□□□ 0.04
PDE1B-208ENST00000552774 WWC3Q9ULE0 1092 aa15.29■□□□□ 0.04
PDE1B-208ENST00000552774 BCS1LQ9Y276 419 aa15.29■□□□□ 0.04
PDE1B-208ENST00000552774 GRAPQ13588 217 aa15.28■□□□□ 0.04
PDE1B-208ENST00000552774 RABL6Q3YEC7 729 aaPredicted RBP15.28■□□□□ 0.04
PDE1B-208ENST00000552774 PRPF40BQ6NWY9 871 aaKnown RBP15.28■□□□□ 0.04
PDE1B-208ENST00000552774 GRAPLQ8TC17 118 aaPredicted RBP15.28■□□□□ 0.04
PDE1B-208ENST00000552774 GREM2Q9H772 168 aa15.28■□□□□ 0.04
PDE1B-208ENST00000552774 SLX4Q8IY92 1834 aa15.27■□□□□ 0.04
PDE1B-208ENST00000552774 BBOX1O75936 387 aa15.27■□□□□ 0.04
PDE1B-208ENST00000552774 GNAI2P04899 355 aa15.27■□□□□ 0.04
PDE1B-208ENST00000552774 FAM161AQ3B820 660 aa15.27■□□□□ 0.04
PDE1B-208ENST00000552774 PELP1Q8IZL8 1130 aaKnown RBP15.27■□□□□ 0.04
PDE1B-208ENST00000552774 ANKRD44Q8N8A2 993 aa15.27■□□□□ 0.04
PDE1B-208ENST00000552774 CDC5LQ99459 802 aaKnown RBP15.27■□□□□ 0.04
PDE1B-208ENST00000552774 SEC31BQ9NQW1 1179 aa15.27■□□□□ 0.04
PDE1B-208ENST00000552774 CHMP3Q9Y3E7 222 aa15.27■□□□□ 0.04
PDE1B-208ENST00000552774 LRRFIP2Q9Y608 721 aaKnown RBP15.27■□□□□ 0.04
PDE1B-208ENST00000552774 CACNA1SQ13698 1873 aa15.27■□□□□ 0.03
PDE1B-208ENST00000552774 CENPBP07199 599 aaPredicted RBP15.26■□□□□ 0.03
PDE1B-208ENST00000552774 ITGA6P23229 1130 aa15.26■□□□□ 0.03
PDE1B-208ENST00000552774 RPS8P62241 208 aaKnown RBP15.26■□□□□ 0.03
PDE1B-208ENST00000552774 IFIT5Q13325 482 aaKnown RBP15.26■□□□□ 0.03
PDE1B-208ENST00000552774 GPR162Q16538 588 aa15.26■□□□□ 0.03
PDE1B-208ENST00000552774 TMC4Q7Z404 712 aa15.26■□□□□ 0.03
PDE1B-208ENST00000552774 CELF1Q92879 486 aaKnown RBP15.26■□□□□ 0.03
PDE1B-208ENST00000552774 TAF1P21675 1872 aa15.26■□□□□ 0.03
PDE1B-208ENST00000552774 ARFGEF1Q9Y6D6 1849 aa15.26■□□□□ 0.03
PDE1B-208ENST00000552774 ANKRD18BA2A2Z9 1011 aa15.25■□□□□ 0.03
PDE1B-208ENST00000552774 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
PDE1B-208ENST00000552774 PPEF1O14829 653 aaPredicted RBP15.25■□□□□ 0.03
PDE1B-208ENST00000552774 YBX3P16989 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDE1B-208ENST00000552774 CCDC57Q2TAC2 916 aa15.25■□□□□ 0.03
PDE1B-208ENST00000552774 ANKRD18AQ8IVF6 992 aa15.25■□□□□ 0.03
PDE1B-208ENST00000552774 C7orf43Q8WVR3 580 aa15.25■□□□□ 0.03
PDE1B-208ENST00000552774 C21orf2O43822 256 aa15.24■□□□□ 0.03
PDE1B-208ENST00000552774 SOGA3Q5TF21 947 aa15.24■□□□□ 0.03
PDE1B-208ENST00000552774 CC2D2BQ6DHV5 1058 aa15.24■□□□□ 0.03
PDE1B-208ENST00000552774 TMX4Q9H1E5 349 aaPredicted RBP15.24■□□□□ 0.03
PDE1B-208ENST00000552774 ZBTB40Q9NUA8 1239 aa15.24■□□□□ 0.03
PDE1B-208ENST00000552774 GRIN3BO60391 1043 aa15.23■□□□□ 0.03
PDE1B-208ENST00000552774 IGHMBP2P38935 993 aaKnown RBP15.23■□□□□ 0.03
PDE1B-208ENST00000552774 MTX1Q13505 466 aa15.23■□□□□ 0.03
PDE1B-208ENST00000552774 SP8Q8IXZ3 490 aa15.23■□□□□ 0.03
PDE1B-208ENST00000552774 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
PDE1B-208ENST00000552774 ATP6V0A2Q9Y487 856 aa15.23■□□□□ 0.03
PDE1B-208ENST00000552774 GRIPAP1Q4V328 841 aa15.22■□□□□ 0.03
PDE1B-208ENST00000552774 TAF7LQ5H9L4 462 aa15.22■□□□□ 0.03
PDE1B-208ENST00000552774 MPHOSPH8Q99549 860 aa15.22■□□□□ 0.03
PDE1B-208ENST00000552774 BSDC1Q9NW68 430 aaPredicted RBP15.22■□□□□ 0.03
PDE1B-208ENST00000552774 COL4A1P02462 1669 aa15.22■□□□□ 0.03
PDE1B-208ENST00000552774 CCDC93Q567U6 631 aa15.21■□□□□ 0.03
PDE1B-208ENST00000552774 CRBNQ96SW2 442 aa15.21■□□□□ 0.03
PDE1B-208ENST00000552774 C1orf115Q9H7X2 142 aa15.21■□□□□ 0.03
PDE1B-208ENST00000552774 SRGAP3O43295 1099 aa15.2■□□□□ 0.02
PDE1B-208ENST00000552774 ATP8B2P98198 1209 aa15.2■□□□□ 0.02
PDE1B-208ENST00000552774 OLFM4Q6UX06 510 aa15.2■□□□□ 0.02
PDE1B-208ENST00000552774 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
PDE1B-208ENST00000552774 RTKN2Q8IZC4 609 aa15.2■□□□□ 0.02
PDE1B-208ENST00000552774 RFX5P48382 616 aaPredicted RBP15.19■□□□□ 0.02
PDE1B-208ENST00000552774 LDHAL6AQ6ZMR3 332 aa15.19■□□□□ 0.02
PDE1B-208ENST00000552774 ZNF594Q96JF6 807 aaPredicted RBP15.19■□□□□ 0.02
PDE1B-208ENST00000552774 LRRC37AA6NMS7 1700 aa15.19■□□□□ 0.02
PDE1B-208ENST00000552774 SPEF2Q9C093 1822 aa15.19■□□□□ 0.02
PDE1B-208ENST00000552774 PNMA6EA0A0J9YXQ4 647 aa15.18■□□□□ 0.02
PDE1B-208ENST00000552774 PTPN12Q05209 780 aaKnown RBP15.18■□□□□ 0.02
PDE1B-208ENST00000552774 CEP85Q6P2H3 762 aa15.18■□□□□ 0.02
PDE1B-208ENST00000552774 RPAP2Q8IXW5 612 aaPredicted RBP15.18■□□□□ 0.02
PDE1B-208ENST00000552774 CNNM1Q9NRU3 951 aa15.18■□□□□ 0.02
PDE1B-208ENST00000552774 MINPP1Q9UNW1 487 aa15.18■□□□□ 0.02
PDE1B-208ENST00000552774 FER1L6Q2WGJ9 1857 aa15.18■□□□□ 0.02
PDE1B-208ENST00000552774 SNED1Q8TER0 1413 aa15.17■□□□□ 0.02
PDE1B-208ENST00000552774 GOLGB1Q14789 3259 aaKnown RBP15.17■□□□□ 0.02
PDE1B-208ENST00000552774 AAMPQ13685 434 aa15.17■□□□□ 0.02
PDE1B-208ENST00000552774 SLC51AQ86UW1 340 aa15.17■□□□□ 0.02
PDE1B-208ENST00000552774 MPNDQ8N594 471 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms