RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 MTFR1LQ9H019 292 aa5.31□□□□□ -1.56
ERBB3-220ENST00000552691 PPP4R2Q9NY27 417 aa5.31□□□□□ -1.56
ERBB3-220ENST00000552691 ATF5Q9Y2D1 282 aaPredicted RBP5.31□□□□□ -1.56
ERBB3-220ENST00000552691 PARP3Q9Y6F1 533 aa5.31□□□□□ -1.56
ERBB3-220ENST00000552691 KIAA1551Q9HCM1 1747 aa5.31□□□□□ -1.56
ERBB3-220ENST00000552691 ABCC12Q96J65 1359 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 MYO5AQ9Y4I1 1855 aaKnown RBP5.3□□□□□ -1.56
ERBB3-220ENST00000552691 SRGAP3O43295 1099 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 IGHDP01880 384 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 CTSWP56202 376 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 ST5P78524 1137 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 MTX1Q13505 466 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 HDAC1Q13547 482 aaPredicted RBP5.3□□□□□ -1.56
ERBB3-220ENST00000552691 POLA2Q14181 598 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 SF3B3Q15393 1217 aaKnown RBP5.3□□□□□ -1.56
ERBB3-220ENST00000552691 SSH3Q8TE77 659 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 CCDC136Q96JN2 1154 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 NLRP3Q96P20 1036 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 COL4A1P02462 1669 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 RIC1Q4ADV7 1423 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 ARFGEF1Q9Y6D6 1849 aa5.3□□□□□ -1.56
ERBB3-220ENST00000552691 MYH7P12883 1935 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 SBF1O95248 1867 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 HMMRO75330 724 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 ITGA6P23229 1130 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 RFX5P48382 616 aaPredicted RBP5.29□□□□□ -1.56
ERBB3-220ENST00000552691 PTPN12Q05209 780 aaKnown RBP5.29□□□□□ -1.56
ERBB3-220ENST00000552691 CCDC152Q4G0S7 254 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 B4GALNT3Q6L9W6 998 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 C3orf67Q6ZVT6 689 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 CCDC85AQ96PX6 553 aaPredicted RBP5.29□□□□□ -1.56
ERBB3-220ENST00000552691 SGIP1Q9BQI5 828 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 BRIP1Q9BX63 1249 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 RWDD1Q9H446 243 aaPredicted RBP5.29□□□□□ -1.56
ERBB3-220ENST00000552691 GREM2Q9H772 168 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 PA2G4Q9UQ80 394 aaKnown RBP5.29□□□□□ -1.56
ERBB3-220ENST00000552691 CHMP3Q9Y3E7 222 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 AKAP11Q9UKA4 1901 aa5.29□□□□□ -1.56
ERBB3-220ENST00000552691 LRRC37AA6NMS7 1700 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 FER1L6Q2WGJ9 1857 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 ANKRD18BA2A2Z9 1011 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 KLRG2A4D1S0 409 aaPredicted RBP5.28□□□□□ -1.56
ERBB3-220ENST00000552691 SURF6O75683 361 aaKnown RBP5.28□□□□□ -1.56
ERBB3-220ENST00000552691 POLD1P28340 1107 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 PDE6BP35913 854 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 PTGER2P43116 358 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 IFIT5Q13325 482 aaKnown RBP5.28□□□□□ -1.56
ERBB3-220ENST00000552691 CCDC57Q2TAC2 916 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 FAM161AQ3B820 660 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 CRY2Q49AN0 593 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 KLHDC4Q8TBB5 520 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 ZNF594Q96JF6 807 aaPredicted RBP5.28□□□□□ -1.56
ERBB3-220ENST00000552691 DCTPP1Q9H773 170 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 SPON1Q9HCB6 807 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 COPRSQ9NQ92 184 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 SEC31BQ9NQW1 1179 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 EXOC6BQ9Y2D4 811 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 NOP58Q9Y2X3 529 aaKnown RBP5.28□□□□□ -1.56
ERBB3-220ENST00000552691 DICER1Q9UPY3 1922 aaKnown RBP5.28□□□□□ -1.56
ERBB3-220ENST00000552691 ARAP2Q8WZ64 1704 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 RTL9Q8NET4 1388 aa5.28□□□□□ -1.56
ERBB3-220ENST00000552691 KDM2BQ8NHM5 1336 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 SRGNP10124 158 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 HOXA10P31260 410 aaPredicted RBP5.27□□□□□ -1.57
ERBB3-220ENST00000552691 LTBP1Q14766 1721 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 LRRC24Q50LG9 513 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 TAF7LQ5H9L4 462 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 LDHAL6AQ6ZMR3 332 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 C10orf71Q711Q0 1435 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 DDX46Q7L014 1031 aaKnown RBP5.27□□□□□ -1.57
ERBB3-220ENST00000552691 CENPQQ7L2Z9 268 aaPredicted RBP5.27□□□□□ -1.57
ERBB3-220ENST00000552691 ANKRD18AQ8IVF6 992 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 SMC5Q8IY18 1101 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 RPGRQ92834 1020 aaKnown RBP5.27□□□□□ -1.57
ERBB3-220ENST00000552691 GCC1Q96CN9 775 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 RBM17Q96I25 401 aaKnown RBP5.27□□□□□ -1.57
ERBB3-220ENST00000552691 CRAMP1Q96RY5 1269 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 CDC5LQ99459 802 aaKnown RBP5.27□□□□□ -1.57
ERBB3-220ENST00000552691 PUS3Q9BZE2 481 aaKnown RBP5.27□□□□□ -1.57
ERBB3-220ENST00000552691 SIL1Q9H173 461 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 FBXO3Q9UK99 471 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 PDZRN3Q9UPQ7 1066 aa5.27□□□□□ -1.57
ERBB3-220ENST00000552691 LRP5O75197 1615 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 PSME4Q14997 1843 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 H0YIN7 160 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 EYA2O00167 538 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 RAB11FIP3O75154 756 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 CIAO1O76071 339 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 SASH1O94885 1247 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 NPR1P16066 1061 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 KCNA3P22001 575 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 CHRNA5P30532 468 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 ALDH1B1P30837 517 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 IGHMBP2P38935 993 aaKnown RBP5.26□□□□□ -1.57
ERBB3-220ENST00000552691 RPS8P62241 208 aaKnown RBP5.26□□□□□ -1.57
ERBB3-220ENST00000552691 G3BP1Q13283 466 aaKnown RBP eCLIP5.26□□□□□ -1.571e-21■■□□□ 12.3
ERBB3-220ENST00000552691 GRAPQ13588 217 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 HSP90AB4PQ58FF6 505 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 ANKRD45Q5TZF3 282 aa5.26□□□□□ -1.57
ERBB3-220ENST00000552691 STYK1Q6J9G0 422 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms