RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 CIAO1O76071 339 aa13.45□□□□□ -0.26
LINC00661-206ENST00000552608 IFIT2P09913 472 aaKnown RBP13.45□□□□□ -0.26
LINC00661-206ENST00000552608 MX1P20591 662 aa13.45□□□□□ -0.26
LINC00661-206ENST00000552608 CCDC152Q4G0S7 254 aa13.45□□□□□ -0.26
LINC00661-206ENST00000552608 BMP2KLQ5H9B9 411 aa13.45□□□□□ -0.26
LINC00661-206ENST00000552608 NBPF5PQ86XG9 351 aaPredicted RBP13.45□□□□□ -0.26
LINC00661-206ENST00000552608 CCDC125Q86Z20 511 aa13.45□□□□□ -0.26
LINC00661-206ENST00000552608 TTLL11Q8NHH1 800 aa13.45□□□□□ -0.26
LINC00661-206ENST00000552608 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
LINC00661-206ENST00000552608 OSBPL3Q9H4L5 887 aa13.45□□□□□ -0.26
LINC00661-206ENST00000552608 IL1RAPL2Q9NP60 686 aa13.45□□□□□ -0.26
LINC00661-206ENST00000552608 AK9Q5TCS8 1911 aa13.45□□□□□ -0.26
LINC00661-206ENST00000552608 EYA2O00167 538 aa13.44□□□□□ -0.26
LINC00661-206ENST00000552608 STK32BQ9NY57 414 aa13.44□□□□□ -0.26
LINC00661-206ENST00000552608 RTL9Q8NET4 1388 aa13.44□□□□□ -0.26
LINC00661-206ENST00000552608 TTC41PQ6P2S7 1318 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 ERC2O15083 957 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 MSH5O43196 834 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 ITGA6P23229 1130 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 PDE1AP54750 535 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 SLC10A5Q5PT55 438 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 TTC22Q5TAA0 569 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 SMIM5Q71RC9 77 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
LINC00661-206ENST00000552608 KLHDC4Q8TBB5 520 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 CAMKK2Q96RR4 588 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 BACH2Q9BYV9 841 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 GPR108Q9NPR9 543 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 SPEF2Q9C093 1822 aa13.43□□□□□ -0.26
LINC00661-206ENST00000552608 SASH1O94885 1247 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 GYS1P13807 737 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 HCLS1P14317 486 aaPredicted RBP13.42□□□□□ -0.26
LINC00661-206ENST00000552608 EN1Q05925 392 aaPredicted RBP13.42□□□□□ -0.26
LINC00661-206ENST00000552608 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
LINC00661-206ENST00000552608 ZNF827Q17R98 1081 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 ERFEQ4G0M1 354 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 AACSQ86V21 672 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 NUTM1Q86Y26 1132 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 SYNE4Q8N205 404 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 NLGN1Q8N2Q7 840 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 NLRP3Q96P20 1036 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 GREM2Q9H772 168 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 STAP2Q9UGK3 403 aa13.42□□□□□ -0.26
LINC00661-206ENST00000552608 SALL3Q9BXA9 1300 aa13.41□□□□□ -0.26
LINC00661-206ENST00000552608 RIC1Q4ADV7 1423 aa13.41□□□□□ -0.26
LINC00661-206ENST00000552608 IGHMBP2P38935 993 aaKnown RBP13.41□□□□□ -0.26
LINC00661-206ENST00000552608 ST5P78524 1137 aa13.41□□□□□ -0.26
LINC00661-206ENST00000552608 NFIXQ14938 502 aa13.41□□□□□ -0.26
LINC00661-206ENST00000552608 CNBD1Q8NA66 436 aa13.41□□□□□ -0.26
LINC00661-206ENST00000552608 CCDC85AQ96PX6 553 aaPredicted RBP13.41□□□□□ -0.26
LINC00661-206ENST00000552608 CDC5LQ99459 802 aaKnown RBP13.41□□□□□ -0.26
LINC00661-206ENST00000552608 CNNM1Q9NRU3 951 aa13.41□□□□□ -0.26
LINC00661-206ENST00000552608 CEP126Q9P2H0 1117 aa13.41□□□□□ -0.26
LINC00661-206ENST00000552608 AKAP2Q9Y2D5 859 aa13.41□□□□□ -0.26
LINC00661-206ENST00000552608 LRP5O75197 1615 aa13.41□□□□□ -0.26
LINC00661-206ENST00000552608 TFCP2Q12800 502 aa13.4□□□□□ -0.26
LINC00661-206ENST00000552608 SF3B3Q15393 1217 aaKnown RBP13.4□□□□□ -0.26
LINC00661-206ENST00000552608 SLC15A2Q16348 729 aa13.4□□□□□ -0.26
LINC00661-206ENST00000552608 CASC1Q6TDU7 716 aa13.4□□□□□ -0.26
LINC00661-206ENST00000552608 LDHAL6AQ6ZMR3 332 aa13.4□□□□□ -0.26
LINC00661-206ENST00000552608 OTUD7AQ8TE49 926 aaPredicted RBP13.4□□□□□ -0.26
LINC00661-206ENST00000552608 ZNF594Q96JF6 807 aaPredicted RBP13.4□□□□□ -0.26
LINC00661-206ENST00000552608 MPHOSPH8Q99549 860 aa13.4□□□□□ -0.26
LINC00661-206ENST00000552608 GLRX3O76003 335 aaKnown RBP13.39□□□□□ -0.27
LINC00661-206ENST00000552608 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
LINC00661-206ENST00000552608 TNNI3KQ59H18 835 aa13.39□□□□□ -0.27
LINC00661-206ENST00000552608 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
LINC00661-206ENST00000552608 COL23A1Q86Y22 540 aaPredicted RBP13.39□□□□□ -0.27
LINC00661-206ENST00000552608 UPF2Q9HAU5 1272 aaKnown RBP13.39□□□□□ -0.27
LINC00661-206ENST00000552608 ECHDC1Q9NTX5 307 aa13.39□□□□□ -0.27
LINC00661-206ENST00000552608 FPGT-TNNI3KV9GXZ4 949 aa13.39□□□□□ -0.27
LINC00661-206ENST00000552608 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
LINC00661-206ENST00000552608 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
LINC00661-206ENST00000552608 CDC45O75419 566 aa13.38□□□□□ -0.27
LINC00661-206ENST00000552608 SERPINB2P05120 415 aa13.38□□□□□ -0.27
LINC00661-206ENST00000552608 TM4SF1P30408 202 aa13.38□□□□□ -0.27
LINC00661-206ENST00000552608 LRRC24Q50LG9 513 aa13.38□□□□□ -0.27
LINC00661-206ENST00000552608 METTL24Q5JXM2 366 aa13.38□□□□□ -0.27
LINC00661-206ENST00000552608 EAF2Q96CJ1 260 aaPredicted RBP13.38□□□□□ -0.27
LINC00661-206ENST00000552608 NRXN2Q9P2S2 1712 aa13.38□□□□□ -0.27
LINC00661-206ENST00000552608 ABCC12Q96J65 1359 aa13.37□□□□□ -0.27
LINC00661-206ENST00000552608 ANKRD18AQ8IVF6 992 aa13.37□□□□□ -0.27
LINC00661-206ENST00000552608 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
LINC00661-206ENST00000552608 PUS3Q9BZE2 481 aaKnown RBP13.37□□□□□ -0.27
LINC00661-206ENST00000552608 CCDC8Q9H0W5 538 aaPredicted RBP13.37□□□□□ -0.27
LINC00661-206ENST00000552608 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
LINC00661-206ENST00000552608 ZNF609O15014 1411 aa13.37□□□□□ -0.27
LINC00661-206ENST00000552608 TNRC6CQ9HCJ0 1690 aaKnown RBP13.37□□□□□ -0.27
LINC00661-206ENST00000552608 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
LINC00661-206ENST00000552608 A0A1B0GUL6 1792 aa13.36□□□□□ -0.27
LINC00661-206ENST00000552608 TRIM6-TRIM34B2RNG4 842 aa13.36□□□□□ -0.27
LINC00661-206ENST00000552608 GSPT1P15170 499 aaKnown RBP13.36□□□□□ -0.27
LINC00661-206ENST00000552608 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
LINC00661-206ENST00000552608 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
LINC00661-206ENST00000552608 NEUROD6Q96NK8 337 aa13.36□□□□□ -0.27
LINC00661-206ENST00000552608 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
LINC00661-206ENST00000552608 SDSP20132 328 aa13.35□□□□□ -0.27
LINC00661-206ENST00000552608 CCDC158Q5M9N0 1113 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms