RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 EPS15P42566 896 aa17.87■□□□□ 0.45
SMARCC2-212ENST00000552566 RTL5Q5HYW3 569 aaPredicted RBP17.87■□□□□ 0.45
SMARCC2-212ENST00000552566 MPNDQ8N594 471 aa17.87■□□□□ 0.45
SMARCC2-212ENST00000552566 SUPT20HQ8NEM7 779 aa17.87■□□□□ 0.45
SMARCC2-212ENST00000552566 HYPKQ9NX55 129 aa17.87■□□□□ 0.45
SMARCC2-212ENST00000552566 IL16Q14005 1332 aa17.87■□□□□ 0.45
SMARCC2-212ENST00000552566 TMEM88BA6NKF7 163 aa17.86■□□□□ 0.45
SMARCC2-212ENST00000552566 GNAI1P63096 354 aa17.86■□□□□ 0.45
SMARCC2-212ENST00000552566 GRAPQ13588 217 aa17.86■□□□□ 0.45
SMARCC2-212ENST00000552566 SP8Q8IXZ3 490 aa17.86■□□□□ 0.45
SMARCC2-212ENST00000552566 GRAPLQ8TC17 118 aaPredicted RBP17.86■□□□□ 0.45
SMARCC2-212ENST00000552566 FAM89AQ96GI7 184 aa17.86■□□□□ 0.45
SMARCC2-212ENST00000552566 CACNA1SQ13698 1873 aa17.86■□□□□ 0.45
SMARCC2-212ENST00000552566 COL4A5P29400 1685 aa17.85■□□□□ 0.45
SMARCC2-212ENST00000552566 SCNN1DP51172 638 aa17.85■□□□□ 0.45
SMARCC2-212ENST00000552566 RIC3Q7Z5B4 369 aa17.85■□□□□ 0.45
SMARCC2-212ENST00000552566 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
SMARCC2-212ENST00000552566 CCDC88AQ3V6T2 1871 aa17.84■□□□□ 0.45
SMARCC2-212ENST00000552566 ZNF521Q96K83 1311 aa17.84■□□□□ 0.45
SMARCC2-212ENST00000552566 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
SMARCC2-212ENST00000552566 RTFDC1Q9BY42 306 aaPredicted RBP17.84■□□□□ 0.45
SMARCC2-212ENST00000552566 VPS33BQ9H267 617 aa17.84■□□□□ 0.45
SMARCC2-212ENST00000552566 ZNRF3Q9ULT6 936 aa17.84■□□□□ 0.45
SMARCC2-212ENST00000552566 ZNF853P0CG23 659 aa17.83■□□□□ 0.44
SMARCC2-212ENST00000552566 TNS4Q8IZW8 715 aa17.83■□□□□ 0.44
SMARCC2-212ENST00000552566 CNTNAP1P78357 1384 aa17.82■□□□□ 0.44
SMARCC2-212ENST00000552566 NUP98P52948 1817 aa17.82■□□□□ 0.44
SMARCC2-212ENST00000552566 CXCL9Q07325 125 aa17.82■□□□□ 0.44
SMARCC2-212ENST00000552566 SLFN5Q08AF3 891 aa17.82■□□□□ 0.44
SMARCC2-212ENST00000552566 PHAXQ9H814 394 aaKnown RBP17.82■□□□□ 0.44
SMARCC2-212ENST00000552566 DICER1Q9UPY3 1922 aaKnown RBP17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 IRS4O14654 1257 aaPredicted RBP17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 CAPN15O75808 1086 aa17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 RAD17O75943 681 aa17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 VEGFBP49765 207 aa17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 GMPSP49915 693 aaPredicted RBP17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 KIAA2012Q0VF49 1180 aa17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 CIAPIN1Q6FI81 312 aa17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 USP50Q70EL3 339 aaPredicted RBP17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 CDCA7LQ96GN5 454 aa17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 MYD88Q99836 296 aa17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 ABT1Q9ULW3 272 aaKnown RBP17.81■□□□□ 0.44
SMARCC2-212ENST00000552566 FMR1Q06787 632 aaKnown RBP eCLIP17.8■□□□□ 0.443e-6■■■■□ 21.4
SMARCC2-212ENST00000552566 TMC4Q7Z404 712 aa17.8■□□□□ 0.44
SMARCC2-212ENST00000552566 CELF1Q92879 486 aaKnown RBP17.8■□□□□ 0.44
SMARCC2-212ENST00000552566 BCL2L13Q9BXK5 485 aa17.8■□□□□ 0.44
SMARCC2-212ENST00000552566 NSFL1CQ9UNZ2 370 aaKnown RBP17.8■□□□□ 0.44
SMARCC2-212ENST00000552566 SF3B3Q15393 1217 aaKnown RBP17.79■□□□□ 0.44
SMARCC2-212ENST00000552566 ADARB2Q9NS39 739 aaKnown RBP17.79■□□□□ 0.44
SMARCC2-212ENST00000552566 GPRC5DQ9NZD1 345 aa17.79■□□□□ 0.44
SMARCC2-212ENST00000552566 C6orf229H3BNL8 230 aa17.78■□□□□ 0.44
SMARCC2-212ENST00000552566 TRAF5O00463 557 aa17.78■□□□□ 0.44
SMARCC2-212ENST00000552566 RIMBP2O15034 1052 aa17.78■□□□□ 0.44
SMARCC2-212ENST00000552566 TRIM28Q13263 835 aaKnown RBP17.78■□□□□ 0.44
SMARCC2-212ENST00000552566 TNIP1Q15025 636 aa17.78■□□□□ 0.44
SMARCC2-212ENST00000552566 WASHC4Q2M389 1173 aa17.78■□□□□ 0.44
SMARCC2-212ENST00000552566 DEFB115Q30KQ5 88 aa17.78■□□□□ 0.44
SMARCC2-212ENST00000552566 PAXIP1Q6ZW49 1069 aaPredicted RBP17.78■□□□□ 0.44
SMARCC2-212ENST00000552566 AIDAQ96BJ3 306 aa17.78■□□□□ 0.44
SMARCC2-212ENST00000552566 CCDC30Q5VVM6 783 aa17.77■□□□□ 0.44
SMARCC2-212ENST00000552566 ZBTB38Q8NAP3 1195 aaPredicted RBP17.77■□□□□ 0.44
SMARCC2-212ENST00000552566 JARID2Q92833 1246 aaPredicted RBP17.77■□□□□ 0.44
SMARCC2-212ENST00000552566 FOXN1O15353 648 aa17.76■□□□□ 0.43
SMARCC2-212ENST00000552566 DDX58O95786 925 aaKnown RBP17.76■□□□□ 0.43
SMARCC2-212ENST00000552566 GPSM2P81274 684 aa17.76■□□□□ 0.43
SMARCC2-212ENST00000552566 GRM1Q13255 1194 aa17.76■□□□□ 0.43
SMARCC2-212ENST00000552566 TSPYL6Q8N831 410 aa17.76■□□□□ 0.43
SMARCC2-212ENST00000552566 TSR2Q969E8 191 aaKnown RBP17.76■□□□□ 0.43
SMARCC2-212ENST00000552566 SCN4AP35499 1836 aa17.76■□□□□ 0.43
SMARCC2-212ENST00000552566 RASSF10A6NK89 507 aa17.75■□□□□ 0.43
SMARCC2-212ENST00000552566 YDJCA8MPS7 323 aa17.75■□□□□ 0.43
SMARCC2-212ENST00000552566 HSP90B1P14625 803 aaKnown RBP17.75■□□□□ 0.43
SMARCC2-212ENST00000552566 RPS8P62241 208 aaKnown RBP17.75■□□□□ 0.43
SMARCC2-212ENST00000552566 CCDC85AQ96PX6 553 aaPredicted RBP17.75■□□□□ 0.43
SMARCC2-212ENST00000552566 CHMP4AQ9BY43 222 aa17.75■□□□□ 0.43
SMARCC2-212ENST00000552566 DBNDD1Q9H9R9 158 aa17.75■□□□□ 0.43
SMARCC2-212ENST00000552566 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
SMARCC2-212ENST00000552566 FANCIQ9NVI1 1328 aa17.74■□□□□ 0.43
SMARCC2-212ENST00000552566 DOK7Q18PE1 504 aa17.74■□□□□ 0.43
SMARCC2-212ENST00000552566 TRMT2AQ8IZ69 625 aaKnown RBP17.74■□□□□ 0.43
SMARCC2-212ENST00000552566 GPR101Q96P66 508 aaPredicted RBP17.74■□□□□ 0.43
SMARCC2-212ENST00000552566 SEC31BQ9NQW1 1179 aa17.74■□□□□ 0.43
SMARCC2-212ENST00000552566 CWC25Q9NXE8 425 aaPredicted RBP17.74■□□□□ 0.43
SMARCC2-212ENST00000552566 POLLQ9UGP5 575 aa17.74■□□□□ 0.43
SMARCC2-212ENST00000552566 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
SMARCC2-212ENST00000552566 WDR33Q9C0J8 1336 aaKnown RBP17.73■□□□□ 0.43
SMARCC2-212ENST00000552566 SHTN1A0MZ66 631 aa17.73■□□□□ 0.43
SMARCC2-212ENST00000552566 PCCAP05165 728 aaPredicted RBP17.73■□□□□ 0.43
SMARCC2-212ENST00000552566 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
SMARCC2-212ENST00000552566 EYA3Q99504 573 aa17.73■□□□□ 0.43
SMARCC2-212ENST00000552566 METTL22Q9BUU2 404 aaPredicted RBP17.73■□□□□ 0.43
SMARCC2-212ENST00000552566 CNOT7Q9UIV1 285 aaKnown RBP17.73■□□□□ 0.43
SMARCC2-212ENST00000552566 MAP3K2Q9Y2U5 619 aa17.73■□□□□ 0.43
SMARCC2-212ENST00000552566 H7C1D1 291 aa17.72■□□□□ 0.43
SMARCC2-212ENST00000552566 PSMD14O00487 310 aa17.72■□□□□ 0.43
SMARCC2-212ENST00000552566 CCDC152Q4G0S7 254 aa17.72■□□□□ 0.43
SMARCC2-212ENST00000552566 CST9Q5W186 159 aa17.72■□□□□ 0.43
SMARCC2-212ENST00000552566 MICALL2Q8IY33 904 aa17.72■□□□□ 0.43
SMARCC2-212ENST00000552566 TBC1D16Q8TBP0 767 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms