RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 ZNF771Q7L3S4 317 aaPredicted RBP13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 ITGB4P16144 1822 aa13.12□□□□□ -0.31
TUBA1C-209ENST00000552448 SPATA31A6Q5VVP1 1343 aa13.12□□□□□ -0.31
TUBA1C-209ENST00000552448 WDR33Q9C0J8 1336 aaKnown RBP13.12□□□□□ -0.31
TUBA1C-209ENST00000552448 EXOC5O00471 708 aa13.12□□□□□ -0.31
TUBA1C-209ENST00000552448 EPB41L2O43491 1005 aaKnown RBP13.12□□□□□ -0.31
TUBA1C-209ENST00000552448 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
TUBA1C-209ENST00000552448 BICC1Q9H694 974 aaKnown RBP13.12□□□□□ -0.31
TUBA1C-209ENST00000552448 OS9Q13438 667 aaPredicted RBP13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 GCKRQ14397 625 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 ANKRD13DQ6ZTN6 518 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 TMEM51Q9NW97 253 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 PA2G4Q9UQ80 394 aaKnown RBP13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 TTC41PQ6P2S7 1318 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 ERC1Q8IUD2 1116 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 IL17RAQ96F46 866 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 TMX3Q96JJ7 454 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 MYD88Q99836 296 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 TSPYL1Q9H0U9 437 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 TMOD3Q9NYL9 352 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 NSFL1CQ9UNZ2 370 aaKnown RBP13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
TUBA1C-209ENST00000552448 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
TUBA1C-209ENST00000552448 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
TUBA1C-209ENST00000552448 NUTM2BA6NNL0 878 aaPredicted RBP13.1□□□□□ -0.31
TUBA1C-209ENST00000552448 NUTM2EB1AL46 878 aaPredicted RBP13.1□□□□□ -0.31
TUBA1C-209ENST00000552448 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
TUBA1C-209ENST00000552448 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
TUBA1C-209ENST00000552448 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
TUBA1C-209ENST00000552448 NUTM2AQ8IVF1 878 aaPredicted RBP13.1□□□□□ -0.31
TUBA1C-209ENST00000552448 CLASRPQ8N2M8 674 aaKnown RBP13.1□□□□□ -0.31
TUBA1C-209ENST00000552448 AK9Q5TCS8 1911 aa13.1□□□□□ -0.31
TUBA1C-209ENST00000552448 MAP4K4O95819 1239 aaPredicted RBP13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 IL25Q9H293 177 aa13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 ANO2Q9NQ90 1003 aa13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 ATP6V1DQ9Y5K8 247 aa13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 MORC2Q9Y6X9 1032 aaPredicted RBP13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 SMTNL1A8MU46 457 aa13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 GLRX3O76003 335 aaKnown RBP13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 SASH1O94885 1247 aa13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 TTC12Q9H892 705 aaPredicted RBP13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 NAP1L2Q9ULW6 460 aaPredicted RBP13.09□□□□□ -0.31
TUBA1C-209ENST00000552448 ARFGEF2Q9Y6D5 1785 aa13.08□□□□□ -0.32
TUBA1C-209ENST00000552448 EPHA10Q5JZY3 1008 aa13.08□□□□□ -0.32
TUBA1C-209ENST00000552448 CNTROBQ8N137 903 aa13.08□□□□□ -0.32
TUBA1C-209ENST00000552448 DNAJC2Q99543 621 aaKnown RBP13.08□□□□□ -0.32
TUBA1C-209ENST00000552448 TEX13AQ9BXU3 409 aaPredicted RBP13.08□□□□□ -0.32
TUBA1C-209ENST00000552448 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.32
TUBA1C-209ENST00000552448 DDX41Q9UJV9 622 aaKnown RBP13.08□□□□□ -0.32
TUBA1C-209ENST00000552448 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 SGSM2O43147 1006 aa13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 U2AF2P26368 475 aaKnown RBP eCLIP13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 UBE2HP62256 183 aa13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 DDB1Q16531 1140 aa13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 COL15A1P39059 1388 aa13.07□□□□□ -0.32
TUBA1C-209ENST00000552448 BCL9O00512 1426 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 IFIT2P09913 472 aaKnown RBP13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 NEK4P51957 841 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.321e-7■■■□□ 14.8
TUBA1C-209ENST00000552448 DOT1LQ8TEK3 1739 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 CALCOCO1Q9P1Z2 691 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 CTNNA3Q9UI47 895 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 VPS72Q15906 364 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 USP48Q86UV5 1035 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 AACSQ86V21 672 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 TSC1Q92574 1164 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 EAF2Q96CJ1 260 aaPredicted RBP13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 GPATCH3Q96I76 525 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 TIGD1Q96MW7 591 aa13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 ZNF830Q96NB3 372 aaPredicted RBP13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
TUBA1C-209ENST00000552448 PDIA4P13667 645 aaKnown RBP13.05□□□□□ -0.32
TUBA1C-209ENST00000552448 HSPA4P34932 840 aa13.05□□□□□ -0.32
TUBA1C-209ENST00000552448 RABL6Q3YEC7 729 aaPredicted RBP13.05□□□□□ -0.32
TUBA1C-209ENST00000552448 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 RFX5P48382 616 aaPredicted RBP13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 CASP7P55210 303 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 KRT222Q8N1A0 295 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 KLHDC4Q8TBB5 520 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 NGLY1Q96IV0 654 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 LSG1Q9H089 658 aaKnown RBP13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 ATP5J2-PTCD1G3V325 749 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 SLFN14P0C7P3 912 aa13.04□□□□□ -0.32
TUBA1C-209ENST00000552448 NCBP1Q09161 790 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms